prot_Ecto-sp13_S_contig7349.18515.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7349.18515.1
Unique Nameprot_Ecto-sp13_S_contig7349.18515.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length623
Homology
BLAST of mRNA_Ecto-sp13_S_contig7349.18515.1 vs. uniprot
Match: D7G8L6_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L6_ECTSI)

HSP 1 Score: 705 bits (1820), Expect = 2.840e-251
Identity = 350/382 (91.62%), Postives = 364/382 (95.29%), Query Frame = 0
Query:  241 PTNPTTSTCIVSDSTNNSIGLSDPVAQRDAPDVETGEKSDTFSTSEAEDTRPIPRDRYRHCTFCSVCEKPRTEPKAVAKCESCPRVFCRKCAGREGETVPKAKYADDVVLPLHKCLCQTKDSEFPKPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKQRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGYKPGSSDDRAGIVTCTLILETMIEKYYADFMEQQELVVDEGSWQAGRERRKREQFARIAQTPLNPALWPNGSCADQLDPVDGTDEETVSDDENMRIGDSICHKRKFGSESSEGQAALNTTAHASNSSAPLVDGAGSSAGGRVACNVEGLDQNMCALAAIGETLGGSSSKR 622
            PTNPTTST IV DSTNNS G+S+PVAQRD PDVETGEKSDTFSTSEAEDTRP PRDRYRHCTFCSVCEKPRTEPKAVAKCE+CPR+ CRKCAGREGETVPK KYADDVVLPLHKCLCQTKDSEFP+PKKGKDPQAHLLKHLLRHDLSVMFREPVDVE NPGYLGVVTREDMMDLGTMK+RLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGYKPGSSDDRAGIV CTLIL+TMIE+YYAD+MEQQELVVDE SWQAGRERRKREQFARIA TPLNPALWPNG+CADQLDPVDG+DEET SDDENMR+GDSICHKRKFGS+ SE QAALNTTAHAS SSAPLVDG GSSAG RVACNVEGLDQNMCALAAIG+ LGGSSSKR
Sbjct:   26 PTNPTTSTSIVRDSTNNSTGVSEPVAQRDTPDVETGEKSDTFSTSEAEDTRPNPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETVPKTKYADDVVLPLHKCLCQTKDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVETNPGYLGVVTREDMMDLGTMKRRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGYKPGSSDDRAGIVMCTLILKTMIERYYADYMEQQELVVDERSWQAGRERRKREQFARIAHTPLNPALWPNGTCADQLDPVDGSDEETDSDDENMRLGDSICHKRKFGSDDSEEQAALNTTAHASISSAPLVDGGGSSAGVRVACNVEGLDQNMCALAAIGKNLGGSSSKR 407          
BLAST of mRNA_Ecto-sp13_S_contig7349.18515.1 vs. uniprot
Match: A0A6H5LCM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCM5_9PHAE)

HSP 1 Score: 462 bits (1189), Expect = 1.450e-154
Identity = 256/383 (66.84%), Postives = 273/383 (71.28%), Query Frame = 0
Query:   81 RHIETDGDDDDDLSDHEPLLSPNSANTVASRVDFGWDGKQEPRAQEDGEEPREPRLCGEARMSPPSTPAAAVEQAVIPRLPAVKTEAESALVDHRGRDVQAAGSPLLNTVEASTSQGSETAGGVTTPPFVKNDTVPGGSIHTSPARDVGACYKHQLFSASPTNPTTSTCIVSDSTNNSIGLSDPVAQRDAPDVETGEKSDTFSTSEAEDTRPIPRDRYRHCTFCSVCEKPRTEPKAVAKCESCPRVFCRKCAGREGETVPKAKYADDVVLPLHKCLCQTKDSEFPKPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKQRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGYKPGSSDDRAG 463
            RHIETDGDDDDD SDHE  LSPNS NTVASR+ FGWDGKQEPRAQ+DGEEPREPRLCGEAR++P ST AAA EQAVIPRL  VKTEAESAL DHRGRDVQA+GSPLLN+VEASTSQ                                           +PTNP TST IVSDSTNNS GLSDP+AQRDAPDVETGEKSDTFS SEAEDTR IPRDRYRHCTFCSVCEKPRTEPKAVAKCE+CPR+ CRKCAGREGET+PKA+                +  EFPKPKKGKDPQAHLLKH++RH   V                        DLGTM++RL KKKQYQSPRGQ KFRTDLEK WV CWKYAGYK GSSDDRAG
Sbjct:  129 RHIETDGDDDDDFSDHELPLSPNSVNTVASRICFGWDGKQEPRAQQDGEEPREPRLCGEARLAPRSTSAAADEQAVIPRLAGVKTEAESALRDHRGRDVQASGSPLLNSVEASTSQ-------------------------------------------APTNPITSTYIVSDSTNNSTGLSDPIAQRDAPDVETGEKSDTFSASEAEDTRSIPRDRYRHCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGREGETLPKAR---------------RRTQEFPKPKKGKDPQAHLLKHIVRHGHDV------------------------DLGTMEKRLFKKKQYQSPRGQPKFRTDLEKFWVKCWKYAGYKAGSSDDRAG 429          
BLAST of mRNA_Ecto-sp13_S_contig7349.18515.1 vs. uniprot
Match: D8LL59_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL59_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 9.170e-30
Identity = 83/230 (36.09%), Postives = 120/230 (52.17%), Query Frame = 0
Query:  296 DRYRHCTFCSVCEKPRTEPKAVAKCESCPRVFCRKCA--------------GREGETVPKAKYADDVVLPLHKCLCQTKDSEFPKPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKQRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGY----KPGSSDDRAGIVTCTLILETMIEKYYADFME--QQELVVDEGSWQAGRERRKRE 505
            DR  H   C+ C+    E   + +CE CPR FC +C               G++  ++   K  D  +    +C  + KD+EF  P  G  P  HLL  LLRHDLS+ FREPVD+  +P Y+  + R  MMDLGTM  +L + K+Y   RG  +F+ DL +IW NC ++AG     +P   +   GIV C L LE M +K+ + +M   Q+     E +W   R+R++RE
Sbjct:  332 DRSSHLMDCASCQHSLPEGDPIGRCERCPRSFCSQCLERGLVEQGVELEALGQDCRSLLNGKQGDISIARCPECF-RGKDNEFAPPPPGGAPMDHLLSELLRHDLSLCFREPVDIVKHPDYVESIGRNAMMDLGTMLSKL-QGKRYPRRRGPGQFQEDLNRIWRNCRRFAGCDELGRPHYGNTVPGIVRCALTLEAMSDKFISSYMSDNQETAAWQESTWDFHRQRQERE 559          
BLAST of mRNA_Ecto-sp13_S_contig7349.18515.1 vs. uniprot
Match: A0A7S1V5M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5M0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.310e-5
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 0
Query:  334 REGETVPKAKYADDVVLPLHKCLCQTKDSEFPKPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKQRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKY 450
            +E   + KA+  ++V  P+ +CL                    +L H+     + +F EPVD E  P Y  +V  +  MDLGT++++LLKKK YQ+P   + F  D+ K+W NC  Y
Sbjct:  346 KEKALLAKAQKPNEVWQPMRRCL-------------------KVLDHIAEDSFADIFLEPVDTEDFPDYEDIV--DQPMDLGTVREKLLKKK-YQAP---ENFARDVRKVWNNCKVY 437          
BLAST of mRNA_Ecto-sp13_S_contig7349.18515.1 vs. uniprot
Match: A0A7S1YB59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YB59_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.580e-5
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 0
Query:  334 REGETVPKAKYADDVVLPLHKCLCQTKDSEFPKPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANPGYLGVVTREDMMDLGTMKQRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKY 450
            +E   + KA+  ++V  P+ +CL                    +L H+     + +F EPVD E  P Y  +V  +  MDLGT++++LLKKK YQ+P   + F  D+ K+W NC  Y
Sbjct:  346 KEKALLAKAQKPNEVWQPMRRCL-------------------KVLDHIAEDSFADIFLEPVDTEDFPDYEDIV--DQPMDLGTVREKLLKKK-YQAP---ENFARDVRKVWNNCKVY 437          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7349.18515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G8L6_ECTSI2.840e-25191.62Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5LCM5_9PHAE1.450e-15466.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL59_ECTSI9.170e-3036.09Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S1V5M0_9STRA7.310e-532.48Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1YB59_9STRA9.580e-532.48Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainSMARTSM00297bromo_6coord: 363..484
e-value: 9.9E-4
score: 20.8
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 376..452
e-value: 2.1E-11
score: 43.7
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 382..458
score: 9.518
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 355..494
e-value: 6.5E-17
score: 63.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 376..488
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING 2A-RELATEDcoord: 369..555
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 369..555
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 294..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7349contigEcto-sp13_S_contig7349:136..3069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7349.18515.1mRNA_Ecto-sp13_S_contig7349.18515.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7349 2..3343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7349.18515.1 ID=prot_Ecto-sp13_S_contig7349.18515.1|Name=mRNA_Ecto-sp13_S_contig7349.18515.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=623bp
MLRDRGPQERHELRQPSAVDTQAATHESCLPSPSRPAGLEPFLPEDDTAS
NGATSPQPEQRQEIEAADHDSEETEDECLDRHIETDGDDDDDLSDHEPLL
SPNSANTVASRVDFGWDGKQEPRAQEDGEEPREPRLCGEARMSPPSTPAA
AVEQAVIPRLPAVKTEAESALVDHRGRDVQAAGSPLLNTVEASTSQGSET
AGGVTTPPFVKNDTVPGGSIHTSPARDVGACYKHQLFSASPTNPTTSTCI
VSDSTNNSIGLSDPVAQRDAPDVETGEKSDTFSTSEAEDTRPIPRDRYRH
CTFCSVCEKPRTEPKAVAKCESCPRVFCRKCAGREGETVPKAKYADDVVL
PLHKCLCQTKDSEFPKPKKGKDPQAHLLKHLLRHDLSVMFREPVDVEANP
GYLGVVTREDMMDLGTMKQRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKY
AGYKPGSSDDRAGIVTCTLILETMIEKYYADFMEQQELVVDEGSWQAGRE
RRKREQFARIAQTPLNPALWPNGSCADQLDPVDGTDEETVSDDENMRIGD
SICHKRKFGSESSEGQAALNTTAHASNSSAPLVDGAGSSAGGRVACNVEG
LDQNMCALAAIGETLGGSSSKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf
IPR011011Znf_FYVE_PHD