mRNA_Ecto-sp13_S_contig7347.18512.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7347.18512.1
Unique NamemRNA_Ecto-sp13_S_contig7347.18512.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: D8LTB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB4_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 2.450e-183
Identity = 256/274 (93.43%), Postives = 261/274 (95.26%), Query Frame = 1
Query:    1 MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQ 822
            MAGLIN LSTAVSPY+MPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEV+AAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQC+ERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHI  HKDHPYHF  E+G  AQYFF G  MP + LL HFQ
Sbjct:    1 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCRERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHILKHKDHPYHFFQEEGGRAQYFFWGERMPWEALLFHFQ 274          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A835YH28_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH28_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 1.990e-140
Identity = 199/275 (72.36%), Postives = 229/275 (83.27%), Query Frame = 1
Query:    1 MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHE-DGWMAQYFFSGGTMPSDDLLLHFQ 822
            MA L+N L++   PY+MP VEKNVVPD +VRFGVRRQC  RLQ I+ GT  EQ A KEA+++EL+ MPIA Q DAAN QHYEVSAAFY + LGPRLKYSSG WP+ D+TF ESE AMLE YC+RA+L DGM+IVDLGCGWGSLTLFLA +YP A +T+ISNSASQK +ID  C ERG  NV VITG+IN FDL ++ KG+FDRV SIEMFEHMKNYKLL+AK++GWL  GGKLFVHIFVHKDHPYHF  E DG+MAQYFF+GGTMPSDDLLL+FQ
Sbjct:    1 MAFLLNKLASMAEPYVMPIVEKNVVPDALVRFGVRRQCADRLQQISAGTPEEQAAAKEAMVKELQSMPIAVQTDAANAQHYEVSAAFYKIVLGPRLKYSSGLWPRPDTTFAESETAMLECYCERAQLADGMRIVDLGCGWGSLTLFLAARYPAARVTAISNSASQKAFIDAACAERGLANVTVITGNINTFDLPDDVKGTFDRVCSIEMFEHMKNYKLLMAKVAGWLRSGGKLFVHIFVHKDHPYHFRAETDGFMAQYFFTGGTMPSDDLLLYFQ 275          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A7S3XXB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXB9_HETAK)

HSP 1 Score: 332 bits (852), Expect = 1.030e-110
Identity = 156/269 (57.99%), Postives = 209/269 (77.70%), Query Frame = 1
Query:   22 LSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFY--HLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQ 822
            L + ++P +MP VE+N+VPDF++R G+R Q   RL ++  GT  EQ+ARK+A+I+ELK MPIA     ANEQHYEV A FY  H+ +GP +KYSSG+WP  ++TFEESE  ML +Y +R++L+DGMK++DLGCGWGS++L++AE++PN  ITS+SNS  QK YI+ QC++RG  N+ V T DIN F+     K  +DRV+SIEMFEHMKNY+ L+ +++ W++PGGKLFVHIF HK HPYHF  + GWMAQ FF+GGTMPSDDLL++FQ
Sbjct:    8 LESYIAPALMPVVERNIVPDFIIRRGIRSQLQDRLNELNEGTLEEQMARKQAMIQELKTMPIAINTKEANEQHYEVPAEFYTKHV-MGPYMKYSSGYWPSPETTFEESETHMLALYAERSELQDGMKLMDLGCGWGSVSLYMAERFPNCQITSVSNSRDQKAYIEDQCQKRGLTNITVYTSDINVFEPPH--KNHYDRVISIEMFEHMKNYQELLKRVASWMAPGGKLFVHIFTHKTHPYHF--DKGWMAQTFFTGGTMPSDDLLMYFQ 271          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A7S3DNC6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNC6_9STRA)

HSP 1 Score: 308 bits (788), Expect = 2.290e-100
Identity = 161/274 (58.76%), Postives = 199/274 (72.63%), Query Frame = 1
Query:   10 LINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGF--GNVRVITGDINEFDLGEED--KGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHF 819
            L+N LS +   +I P V+  +VPDF++RFG+R Q  + L  +A      +L  K  ++ +LK MPIA   D ANEQHYEV A FY L LGPR KYSSG WP  D+TFEESEVAMLE YC  A +EDGM IVDLGCGWGSLTL LAE+YPNA IT ISNS SQ+ YI    KERG+  GN+ ++T ++++ D G  D  KG+ DRVM++EMFEHMKNY  L+ K++G+L PGGKLFVHIF HKD+ YHF  + GWM+  FF+GGTMPSDDLLL+F
Sbjct:   48 LLNVLSNSTESFI-PMVKMGLVPDFLIRFGIRVQLYNHLNVLAADNVETELKNKTEIVHKLKTMPIAIATDEANEQHYEVPAKFYDLCLGPRKKYSSGLWPNKDTTFEESEVAMLEHYCQLAGVEDGMSIVDLGCGWGSLTLHLAERYPNAKITGISNSHSQREYILNTAKERGYNVGNITIVTCNVSD-DKGALDVVKGN-DRVMTVEMFEHMKNYDHLMEKVNGFLKPGGKLFVHIFTHKDYTYHF--DKGWMSDNFFTGGTMPSDDLLLYF 316          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A2A2XVR3_9BACT (SAM-dependent methyltransferase n=1 Tax=Spartobacteria bacterium AMD-G4 TaxID=1982325 RepID=A0A2A2XVR3_9BACT)

HSP 1 Score: 301 bits (771), Expect = 1.600e-98
Identity = 140/257 (54.47%), Postives = 193/257 (75.10%), Query Frame = 1
Query:   58 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHED--GWMAQYFFSGGTMPSDDLLLHFQ 822
            + +N++PD  +R G+R   G +L++ A+  ++ Q       I+ELK+ PIA +  +ANEQHYEV   F+ L LGPR+KYSSG+WP+ D+TF ESE AML + C+RA+L DG  +++LGCGWGSLTL++AEKYP + IT +SNSA+QK +ID +   +GF N+R++T D+NEF+ G+    SFDRV+S+EMFEHMKNY+LL+AK++ WL  GGKLFVHIF H++  YHF  +D   W+ +YFF GGTMPSDDLLL+FQ
Sbjct:    8 LSRNLLPDAAIRIGIRNLLGKKLREEAKPDAIAQGEALAVFIDELKRSPIAIKTASANEQHYEVPTDFFKLVLGPRMKYSSGYWPREDTTFAESEEAMLALSCERAQLTDGQDVLELGCGWGSLTLWMAEKYPQSRITGVSNSATQKAHIDAEAVRKGFKNIRILTADMNEFEAGD---ASFDRVVSVEMFEHMKNYQLLMAKVARWLRVGGKLFVHIFTHREFAYHFEGKDPSDWITRYFFEGGTMPSDDLLLYFQ 261          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A9SDN3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SDN3_PHYPA)

HSP 1 Score: 296 bits (759), Expect = 1.270e-96
Identity = 144/276 (52.17%), Postives = 197/276 (71.38%), Query Frame = 1
Query:    1 MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLH--EDGWMAQYFFSGGTMPSDDLLLHFQ 822
            MA LI     A     M A++ NV+PD V+RFGVR+    RL +I + T   Q+    + ++ LK+MPIA   + AN QHYEV   FYHL LG RLKYSS ++PK DST +E+E +M  +Y +RA+L+DG  ++D+GCGWGSL++++AEK+PN+++T +SNS +Q+ +I  +C++RG  NV +IT D+N F++   DK SFDR++SIEMFEHMKNY+ L+ KIS WL P G LF+HIFVHK  PYHF    ED WM++ FF+GGTMPS  LLL+FQ
Sbjct:    1 MASLIKAGRDATLKVSMSALQMNVIPDMVLRFGVRKLLEGRLSEITKSTLEAQMQELLSFVQSLKQMPIAVHMEDANTQHYEVPTEFYHLVLGKRLKYSSAYFPKKDSTLDEAEESMFALYAERAQLQDGQSVLDVGCGWGSLSMYIAEKFPNSNVTGVSNSETQRAFITEECRKRGLSNVTIITCDMNVFNI---DK-SFDRILSIEMFEHMKNYEKLLKKISSWLKPDGLLFIHIFVHKSIPYHFEDKGEDDWMSRNFFTGGTMPSSSLLLYFQ 272          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A6U3YXE6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YXE6_9STRA)

HSP 1 Score: 297 bits (760), Expect = 5.130e-96
Identity = 155/275 (56.36%), Postives = 199/275 (72.36%), Query Frame = 1
Query:   22 LSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVE-QLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFG--NVRVITGDINEFDLGEEDKGSFD------RVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHF 819
            L +  S   +P V K ++PD +VR+G+R +CG  L ++ RG S E +L  K  ++  LK MP+A + DAANEQHYEV AAFY L LGPR KYSSG WP S++TFEESE AML  YC+RA+++DGM IVDLGCGWGSLTL+LAEK+PNA IT ISNS SQ+ +I     +RG    N+R++T ++++      DKG+ D       VMSIEMFEHMKNY  L++K+  +L P GKLFVHIF HK++ Y+F  EDGWMA+ FF+GGTMPSDDLLL+F
Sbjct:   60 LLSKTSDAFIPLVYKGLIPDALVRWGIRLRCGAHLTEL-RGISAEDELQTKMEIVSSLKTMPVAIETDAANEQHYEVPAAFYELCLGPRKKYSSGLWPFSNTTFEESEDAMLAKYCERAQVKDGMNIVDLGCGWGSLTLYLAEKFPNAQITGISNSHSQREHILKTAADRGLNVDNIRIVTCNVSD------DKGALDVVKDNDLVMSIEMFEHMKNYSTLLSKVHNFLKPSGKLFVHIFTHKEYAYNF--EDGWMAENFFTGGTMPSDDLLLYF 325          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A388KJN1_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJN1_CHABU)

HSP 1 Score: 295 bits (756), Expect = 5.980e-96
Identity = 146/257 (56.81%), Postives = 184/257 (71.60%), Query Frame = 1
Query:   58 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFL--HEDGWMAQYFFSGGTMPSDDLLLHFQ 822
            +E NV+PD + R  VR   G RL  + + T  EQ+      IE LK+MPIA     ANEQHYEV   FY L LG  LKYS+ ++P   ++ +E+E AML MYC+RA+LEDG  +VDLGCGWGSLTLF+AE+YPN+ IT+ISNSA+Q+ YI+ +C  R   NVRVIT DIN+ ++ E+    FDRV+SIEMFEHMKNY+ L+ KIS WL P G LFVHIF HK+ PYHF    +  WMA+YFF+GGTMPSD+LL +FQ
Sbjct:   20 METNVLPDQITRRAVRWLVGQRLNSLYKSTGEEQMEELTRFIESLKEMPIAVNTREANEQHYEVPTRFYKLCLGKNLKYSACYFPSEHTSLDEAEDAMLRMYCERAQLEDGQSVVDLGCGWGSLTLFVAERYPNSKITAISNSATQRAYIEEECTNRALENVRVITADINDLEIAEQ----FDRVVSIEMFEHMKNYQKLLRKISTWLKPQGMLFVHIFTHKEAPYHFEVDSDSDWMAKYFFTGGTMPSDNLLTYFQ 272          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A397UB37_9GLOM (SAM-dependent methyltransferase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UB37_9GLOM)

HSP 1 Score: 294 bits (752), Expect = 1.600e-95
Identity = 138/257 (53.70%), Postives = 185/257 (71.98%), Query Frame = 1
Query:   52 PAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQ 822
            P +++ ++PDF++R GVR     RL++I  G   +   RK   + +LK+ PIA   + ANEQHYEVS  F    LG R+KYS   +P  + T +E+E  MLE YC +A+L+DGM I+DLGCGWGSL L+L EKYPNA IT++SNS++Q+ YI+G  +++GF N+ VIT D+ EFD   ED+  FDR++SIEMFEHMKNY+ L +KIS WL P G LFVHIF H++ PY F+ +DGWMA+YFF+GGTMPS DL  +FQ
Sbjct:   20 PFLDRGIIPDFIMRLGVRNLLQVRLKEINFGDIQKNQQRKSIYVNQLKERPIAEHTNKANEQHYEVSTEFMQTCLGQRMKYSCCLFPNGNETLDEAEECMLESYCVKARLQDGMNILDLGCGWGSLCLYLCEKYPNAKITALSNSSTQREYINGIAQQKGFKNLNVITADVKEFDF--EDESKFDRILSIEMFEHMKNYEFLFSKISNWLKPQGLLFVHIFCHREQPYDFVIDDGWMAKYFFTGGTMPSADLFSYFQ 274          
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A1Z5K7V8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7V8_FISSO)

HSP 1 Score: 295 bits (756), Expect = 1.660e-95
Identity = 155/273 (56.78%), Postives = 197/273 (72.16%), Query Frame = 1
Query:   28 TAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSV-EQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFG--NVRVITGDINEFDLGEEDKGSF------DRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHF 819
            +A++   +P ++  ++PD ++R+G+R Q    L  I +GTS  E L  K  +I++L++ PIA +  AANEQHYEV AAFY L LGP  KYSSG+WP   +TFEESE+ MLE+YC RA+L+DGMKIVDLGCGWGSLTLFLA KYPNA ITSISNS SQ+ YI      RG    N++VIT ++ +      D+G+       DRVM+IEMFEHMKNY+ L+ K+ G+L PGGKLFVHIF HKD+ YHF  E GWM+  FF+GGTMPSDDLLL+F
Sbjct:   52 SALTESFIPLIQMGLIPDCLIRWGIRLQLRDHLH-ILQGTSCQENLTTKMKIIQQLRQQPIAIETTAANEQHYEVPAAFYDLCLGPCKKYSSGYWPTPQTTFEESELHMLELYCQRAELQDGMKIVDLGCGWGSLTLFLAAKYPNAKITSISNSHSQRDYILSTAAARGLNVQNIQVITCNVAD------DQGALRVVRDNDRVMTIEMFEHMKNYQSLLQKVQGFLKPGGKLFVHIFTHKDYAYHF--EQGWMSDNFFTGGTMPSDDLLLYF 315          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTB4_ECTSI2.450e-18393.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YH28_9STRA1.990e-14072.36S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S3XXB9_HETAK1.030e-11057.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3DNC6_9STRA2.290e-10058.76Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A2A2XVR3_9BACT1.600e-9854.47SAM-dependent methyltransferase n=1 Tax=Spartobact... [more]
A9SDN3_PHYPA1.270e-9652.17Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A6U3YXE6_9STRA5.130e-9656.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A388KJN1_CHABU5.980e-9656.81Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A397UB37_9GLOM1.600e-9553.70SAM-dependent methyltransferase n=2 Tax=Gigaspora ... [more]
A0A1Z5K7V8_FISSO1.660e-9556.78Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7347contigEcto-sp13_S_contig7347:130..5969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score521.2
Seed ortholog evalue3e-145
Seed eggNOG ortholog2880.D8LTB4
Model size822
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Mycolic acid cyclopropane synthetase
EggNOG OGs2QQW3@2759,COG2230@1
Ec32 ortholog descriptionMycolic acid cyclopropane synthase
Ec32 orthologEc-12_005920.1
Cds size822
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7347.18512.1prot_Ecto-sp13_S_contig7347.18512.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7347 130..5969 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464002.9544885-CDS-Ecto-sp13_S_contig7347:129..2481681464002.9544885-CDS-Ecto-sp13_S_contig7347:129..248Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 130..248 -
1681464002.9831746-CDS-Ecto-sp13_S_contig7347:814..9951681464002.9831746-CDS-Ecto-sp13_S_contig7347:814..995Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 815..995 -
1681464002.9963436-CDS-Ecto-sp13_S_contig7347:1379..15051681464002.9963436-CDS-Ecto-sp13_S_contig7347:1379..1505Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 1380..1505 -
1681464003.007439-CDS-Ecto-sp13_S_contig7347:2201..23771681464003.007439-CDS-Ecto-sp13_S_contig7347:2201..2377Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 2202..2377 -
1681464003.0181146-CDS-Ecto-sp13_S_contig7347:3119..31801681464003.0181146-CDS-Ecto-sp13_S_contig7347:3119..3180Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 3120..3180 -
1681464003.036772-CDS-Ecto-sp13_S_contig7347:5570..56321681464003.036772-CDS-Ecto-sp13_S_contig7347:5570..5632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 5571..5632 -
1681464003.0716755-CDS-Ecto-sp13_S_contig7347:5872..59691681464003.0716755-CDS-Ecto-sp13_S_contig7347:5872..5969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7347 5873..5969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7347.18512.1

>prot_Ecto-sp13_S_contig7347.18512.1 ID=prot_Ecto-sp13_S_contig7347.18512.1|Name=mRNA_Ecto-sp13_S_contig7347.18512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTS
VEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSS
GFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEK
YPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGS
FDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHE
DGWMAQYFFSGGTMPSDDLLLHFQ
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mRNA from alignment at Ecto-sp13_S_contig7347:130..5969-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7347.18512.1 ID=mRNA_Ecto-sp13_S_contig7347.18512.1|Name=mRNA_Ecto-sp13_S_contig7347.18512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7347:130..5969- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGGCCTGATAAATACACTCAGCACGGCAGTGTCTCCGTACATTAT GCCAGCCGTTGAGAAGAACGTGGTGCCTGATTTTGTGGTTCGATTCGGTG AGCGATAAGCTCTCCTGTTTACGTAATGTTTCATGAGTCATGTATTAGGC TGTTTTTTGGAACCCCGCGCTGCTACTACTGCTGCTTCTGCTGCTGTGTC ATCCTTCAAATGAATGCCACTGCTTTGCAAACTTTCTAGGACCTTGGCGA CCAACACTGAAAGTGTCTGCACAGAAATCGTTGGACGTCCCAACATTGCG TCTATTTATTGTATTGCGCCTCCTGTCGGTGCCCCAGGCGTTCGGAGACA GTGCGGCCACCGACTCCAGGATATCGCTAGGGGCACCTCAGTCGAACAGG TTTGTGTCTGTGTGCACCACGCGGGTTGCTGGCGCCGTCGTGACCTTCCC GACACCGACCGAAAACAGCAGTGCACCTTGCGCAGCAGTGCATCGCAGTG CGGTAGGCTTCGTTTCGTCAAAAAATGAGGATAACAGAAGTTGACATGCA TTCAACATGTCATGATGAGTGGGGTTATCTACACGAATGCATCGGTAGTC GGTATGTACCGCCTGTGGCAGTACGTAAGATACCACACCCCCTGAACTGA TTTTCAAAGTTCGATTTCTCGACAGCAGAAAACAGGGCCGCGGTGCCGAA AATAGCGCCATCTGAACTGTCTTGTTGAAAAGCTGTCCGAACACGTATCG CTTGGGCTATCAATACTCTTCGTCTTGGAGTACTGGAGCTGTGAAAACTG AAAACTGATCAACGAGGTGTGATTTCTCACCTTATGTCACCTACGGCGAG CCATCAGCGATCTGTCTCAGTCGAAAGGCCCCGCGCTTTCGTTGGGTGGG ATTTTCGGCAGGAGGCTGGTGCGCGTACACAGAAGTCACATTCCAAACCC AGCGGGCAAGTGGCCCATGGTGAATGAATTGCTGTCGATGACCCGTGGAT TTCCACACGGGGTCAAGCAGGGTTGATCCTGACGTTTTTCACTGTAGGTT GACCTACGACTGAAGAGGGAGTCGCGGAGGGGGCACGTGTGGCGCGAACA AGGAAGTACGCCAGGAAACATGAAGAAGATCGACATTGCCGCCGACATGC GCGCTAGTTAGGCTTCCGCGTCGAGCTTGTCCCTTCCCCCTACAATACCC CCGAAGAAGAAAGCCAAGGAGGTTGTAGGCAAGAAACGACGAAGAGAAGC ACCGCATTTTTGTCAGCTGTACTCTTCCTAATGAGAAGACTCATGGACGT GCCCGCTACGGCCTGGCTTTGCGGGAGGTTCTTGACCAAGGTTACTGTAC CGAGAAGTTGCTCGCGATCAATTTTCCGGGAAGCATGATTCGGTGTTCGG TGAATCAGCAGCACTCAAGGCCAGGCGGGGTAGACAAACAGGAAAGCGAG GGCTCAATGAAGCAAACACGCAGCGTTACGGGCAAAGAACCGGGAACCAG TGGAGGCTGCAATGGAGACATGGTCATGCGAAAACTCTCCTGAACGTGCT CTTTTGGGAAAGAACTAAGGCTGAATGAAGCAAGGCGCCAAAAAACGCAG CGTTACTGGCAAAGAAGAACATAAGCGGAGGCTGCAGCAGGGGCATGGAT ATGAAAATTCTGTTTCCCCATGCCTGCGTTGCAGTCTCCACTGCTTCTCC TTCTTTTGCAGGTTCGCTGCGCTTTATGAGGCCTCCGCTTCATTCAGCAT TCGCTCTTTCTCGAAGAGCACGGTTAGCGAAATATATTTCTATCCCGCCT GGCTTTGAATGCTGGTCGTTCATCGAATCATATTTCCGGAAAAAATAATC ACGAACGTCCGGAGAAAGCAGACCGTAGGGGACACGTCCATGAGCCCTAT CTGTAGGACTAGTGTAGCTTGTAGCTGGAGAGTCCATGAGCCCTATCTGT TGGACTAGTATAGCTGGAGAAACTGAGGGTTCTCTTCCTTGCTTGGTCAT TTGTGTTGTGGTGGCATAATGTAGAAGGACTCTACGCAGTATACTTCTAC AACATCGCGAGTGTTCGTGAAGCCGTCCTAAAACGTACCGAAAAACAAAC GCAGAAACATACGGCGACAATACTGTACAGTTAAACGTTGAGGGTTGGGG GCGGGCCTGATGACGAGGAGGCAAAGAAATACGGCTTTCGGAGCGCGAAG TGAATGACTGCTGTGATTTTCTCTTAGCTCACGAACTGTCAAGCAGTTTT GCCTCTTGGCAGTAATCGGGCGTGACCATCCCGACACGGGGCACCAGGTC TTCTTACGGCTCGCCTCTCGTCGAGAAAAAACGATTCAATCCAATTGGGG AAACAGCCATGACACACAGCAGTCTATCAGCCAGTAGACGATGTGGAACG TTGAACACAAACTCCTTCGGTGGTTTCGTTACGTGGTGGGGGACGTGTGT GATCAATTCGGGCATGTCGATGCCACAGGTGCTGTATGCTACAGTTTCGA GCGATACAGGTATTGGCACCATCATCAGGTGTCTAGCATGCGAGGAATAG GCGTCTCAAAAGCAAGGAATTACTCTGCAATTGTTCATTCCTTCAAGCGC GTTGAAATCCAAGCGCTCATTCAAATGTTTGGCGCCCAGGTCGTGCGGAA TCCATGCGGTCCACATATATTCGTGTGTGTATACACACCCTGCTCTGTGC CTCTCTCTCTTCCTTTCTCGCTGATGATTGCCCTGCTTACTTTTCTGCCC CCGCCCCACCCACATCTCTCGCCCCTCTCGGCGCTCTAGCTAGCTCGCAA GGAGGCTCTCATCGAAGAACTCAAGAAGATGCCGATCGCGACTCAGCAAG GTCAGTGTGGAGTCTGGGTGGGCAACAGCATCCGCCACGAAGGCAGCCAC TCGCTCTAGTGCACCGTGCGGTAATTTTTTGACCAGAGAACACCAGCGGT GCTGTCCTTAGCTCGAAGGCTTGGGAAATTTGTTGTCGAAATGAGGCGGT AGTCCATCCCTGCTGTTCTGCCCAGTGCCGGCTGGCTCTCTCGCGGGACA GCGGTTTTGTCTCCCGTCCCTGTTCGTTTTGGCGACGATCTTTGGAGGCG TTTTTTTCTGGTTTTGTACTTGATTTGTTGGCGGGCGCTTGGAATCAGGC ACGTGTCCGGTCTGCTCGCTCCACCCACCCACCAGATTTCTCTATCGAAA CACCTTTTGACGACCGCCACAGCACGGGTAGTCTGTTGGAGCTGGCTGCC GGAACGTAACCTGAAGCCCGTTCTGCCCCCGCGCGCGCAAGCCTGCCCCC TGTTGTATTTATGTACGATCGCACTGTCAGGTAATGCAAAACGGCGCAGT CCCAACAAGAGGTGCGGCAGCAGAACATGACCCTCTTCGTCGTTTTCAAG AATTTTTTTTCACGAACCTTGTTCACGAAAGAAACTAGTGATCCCCTGAA GATGTCATTAATCGCAACGACAGCAACAACTACTAAATACTACAACTACG ACTACCATACCATTTCTGCTTCTACAGCATAAGCAACAACACTGTCTGCA GGCGCCCAACCCCAACCTTGCCCCGAAACGAAAATAATACAGACGCGGCA AACGAACAGCATTACGAGGTGAGCGCGGCCTTCTACCACCTCGCGCTCGG GCCGCGGCTCAAGTACTCCTCGGGCTTCTGGCCCAAGAGCGACAGCACCT TCGAGGAATCCGAAGTGGCCATGCTCGAGATGTACTGCGACAGGGCGAAG CTCGAGGACGGCATGAAGGTGTGGAGGGGGTTGGGGCGTTTTTTGCCTGT CGTCAGGCGACGTTTCGCTGTTTTCTTGTGTTTTTTCCTCGAGTGTTCCA CTGCGGGACTGCTGTGTCTTGAGGGTTCGGTGACGTCGCCATCGGCTTGT CTTGTCGTTGCTTGATGACTGCGGGTGCGACACCGTTGGTTGTGGAGCGT CCCTTGCGGAGGGATTTTCGAGGCGGAGTGGATGCTGAGATAAGCCGGGG CTAGGGGGCGGCGAGATCGTGAAGAATTTTGGCCCCACGCGCTGCGGCGA CCGTTGTTTTTTCTGTTGCGCTTGTTTTTCGTTTTTTCGTGATCCACACT TGATTTTTCTTGCTCCCGATTCGCGGTATATTCGTTTGTGTGAGGGCGAC CCTACCCTGTGGGTTCTAAAGAGACGTCAGTTCCCATCTCTTGGGAATAG CTAACACATCTACTTGTGTACCGATATCTGTTCGTGGTATCGCTCCCCTC GCGTCTTTCGCCGCCATCGAAACACCTACATCCGGGGAAGTTTCTTTCGA AATTCCGACACCAATCTCATTTTTTTTGCATGATTTCCTGCTCACGAATG GGCACCCGATTGCAACAAGAAAGCTTGTACCGGTAACATCGTGGTTGGTT CTCATAAACCACGACTCCACCGCTGTGGTTCTGCTGCGCCGCTGGTCGTT GTCACGTCGCTCAGATCGTTGACCTCGGCTGCGGGTGGGGCTCGCTGACG CTCTTCCTGGCGGAGAAGTACCCCAACGCGTCCATCACCTCCATCTCCAA CTCAGCGTCGCAGAAGACGTACATCGACGGACAGTGCAAGGTGAGAGCAG GGGATGGTGCTGCTCATCCATGTTGGTTTTCTCCCTCGGGTGTACCGATG ATGTAGCACGAATTGTCGGGCCTGGTACAAGCGAGCGCCGAGAAGGGAGA GGGGAGAACCCTCGTTTTTGTGGTCATTTTCTGCTGCAGATGAAAAATGG CCATGTACGCAGTAGATGTAAGTGTCATGGAACATTTTTTTGCACGACGT GCATAGGAAGTAGTTTTTCTGACGTCGACGATGTCGTTCTTTGAAACATG GGGTTCGGCTTCGTTTCCCTCACGATTCACTCCTCTTCCGATACCGTCAC CATGGCCATCACCATCGCGACCACGACGATGACCACCACCATCACCACCA TCACCATCACCATGATCGACACAGGAGCGAGGGTTTGGCAACGTCCGCGT GATCACGGGCGACATCAATGAGTTCGACCTTGGCGAGGAGGACAAGGGAT CCTTCGACCGCGTGATGAGCATCGAGATGTTTGAGCACATGAAGAACTAC AAGCTCCTTATCGCGAAGATCAGCGGCTGGCTCTCTCCCGGCGGGAAGCT CTTCGGTGAGTTGTTTAGTTTATTGGCCGCATCAGTGCTCTTGAGGCTAC TAGCTTTTCGCCATGGTCGACGCCGGGGCCCCGCTTGAGATGCTGAACAG GGCGCTATTGTCCTTGCTCTGTCCTGGAGGGATAAGGATAAGAGTATCAT ACGAGGGAGGAAAGCAGCAGTGACTTAGGTCATTCAGTGACTTAAGTCGT TTACACAACAAAAATTAACGCTTGTTTACCGCAAATTATTATAATTAACG CAAAACATAGAAAATGAAAGTGAAAAAGGGAGGGATGGTCGCGTATTTGG AGCGTGTCGCTGACGGGCCTGCTGCGACAGGAGATGGATTTATGTAAAAT TCAAGAAGTGGGGCTATCCGACAATGCGCATAAACATCCCCCTCACCAAC CATGCACGTCTCCCCCGAGTCGTGTACGCGTGCGTCTACCCCTCTTGTGT ATCGGCACGCTCCGTCAGACTTGCAGGCTCTTCGGTTGCACTCGTTCACG CTTCAATCGTTTGTCGTTTCGTTCTATTCTTTTTTCTGCCGCACCCCCAC CGTGTCTTCCGTTGGTGCCAGTGCACATCTTCGTGCACAAGGACCACCCG TACCACTTCCTCCACGAGGACGGGTGGATGGCGCAGTACTTCTTTTCGGG GGGAACGATGCCTTCGGACGACCTCCTGCTTCACTTTCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7347:130..5969-

>mRNA_Ecto-sp13_S_contig7347.18512.1 ID=mRNA_Ecto-sp13_S_contig7347.18512.1|Name=mRNA_Ecto-sp13_S_contig7347.18512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7347:130..5969- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGGCCTGATAAATACACTCAGCACGGCAGTGTCTCCGTACATTAT
GCCAGCCGTTGAGAAGAACGTGGTGCCTGATTTTGTGGTTCGATTCGGCG
TTCGGAGACAGTGCGGCCACCGACTCCAGGATATCGCTAGGGGCACCTCA
GTCGAACAGCTAGCTCGCAAGGAGGCTCTCATCGAAGAACTCAAGAAGAT
GCCGATCGCGACTCAGCAAGACGCGGCAAACGAACAGCATTACGAGGTGA
GCGCGGCCTTCTACCACCTCGCGCTCGGGCCGCGGCTCAAGTACTCCTCG
GGCTTCTGGCCCAAGAGCGACAGCACCTTCGAGGAATCCGAAGTGGCCAT
GCTCGAGATGTACTGCGACAGGGCGAAGCTCGAGGACGGCATGAAGATCG
TTGACCTCGGCTGCGGGTGGGGCTCGCTGACGCTCTTCCTGGCGGAGAAG
TACCCCAACGCGTCCATCACCTCCATCTCCAACTCAGCGTCGCAGAAGAC
GTACATCGACGGACAGTGCAAGGAGCGAGGGTTTGGCAACGTCCGCGTGA
TCACGGGCGACATCAATGAGTTCGACCTTGGCGAGGAGGACAAGGGATCC
TTCGACCGCGTGATGAGCATCGAGATGTTTGAGCACATGAAGAACTACAA
GCTCCTTATCGCGAAGATCAGCGGCTGGCTCTCTCCCGGCGGGAAGCTCT
TCGTGCACATCTTCGTGCACAAGGACCACCCGTACCACTTCCTCCACGAG
GACGGGTGGATGGCGCAGTACTTCTTTTCGGGGGGAACGATGCCTTCGGA
CGACCTCCTGCTTCACTTTCAG
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