mRNA_Ecto-sp13_S_contig7347.18512.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: D8LTB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB4_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 2.450e-183 Identity = 256/274 (93.43%), Postives = 261/274 (95.26%), Query Frame = 1
Query: 1 MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQ 822
MAGLIN LSTAVSPY+MPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEV+AAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQC+ERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHI HKDHPYHF E+G AQYFF G MP + LL HFQ
Sbjct: 1 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCRERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHILKHKDHPYHFFQEEGGRAQYFFWGERMPWEALLFHFQ 274
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A835YH28_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH28_9STRA) HSP 1 Score: 408 bits (1048), Expect = 1.990e-140 Identity = 199/275 (72.36%), Postives = 229/275 (83.27%), Query Frame = 1
Query: 1 MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHE-DGWMAQYFFSGGTMPSDDLLLHFQ 822
MA L+N L++ PY+MP VEKNVVPD +VRFGVRRQC RLQ I+ GT EQ A KEA+++EL+ MPIA Q DAAN QHYEVSAAFY + LGPRLKYSSG WP+ D+TF ESE AMLE YC+RA+L DGM+IVDLGCGWGSLTLFLA +YP A +T+ISNSASQK +ID C ERG NV VITG+IN FDL ++ KG+FDRV SIEMFEHMKNYKLL+AK++GWL GGKLFVHIFVHKDHPYHF E DG+MAQYFF+GGTMPSDDLLL+FQ
Sbjct: 1 MAFLLNKLASMAEPYVMPIVEKNVVPDALVRFGVRRQCADRLQQISAGTPEEQAAAKEAMVKELQSMPIAVQTDAANAQHYEVSAAFYKIVLGPRLKYSSGLWPRPDTTFAESETAMLECYCERAQLADGMRIVDLGCGWGSLTLFLAARYPAARVTAISNSASQKAFIDAACAERGLANVTVITGNINTFDLPDDVKGTFDRVCSIEMFEHMKNYKLLMAKVAGWLRSGGKLFVHIFVHKDHPYHFRAETDGFMAQYFFTGGTMPSDDLLLYFQ 275
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A7S3XXB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXB9_HETAK) HSP 1 Score: 332 bits (852), Expect = 1.030e-110 Identity = 156/269 (57.99%), Postives = 209/269 (77.70%), Query Frame = 1
Query: 22 LSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFY--HLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQ 822
L + ++P +MP VE+N+VPDF++R G+R Q RL ++ GT EQ+ARK+A+I+ELK MPIA ANEQHYEV A FY H+ +GP +KYSSG+WP ++TFEESE ML +Y +R++L+DGMK++DLGCGWGS++L++AE++PN ITS+SNS QK YI+ QC++RG N+ V T DIN F+ K +DRV+SIEMFEHMKNY+ L+ +++ W++PGGKLFVHIF HK HPYHF + GWMAQ FF+GGTMPSDDLL++FQ
Sbjct: 8 LESYIAPALMPVVERNIVPDFIIRRGIRSQLQDRLNELNEGTLEEQMARKQAMIQELKTMPIAINTKEANEQHYEVPAEFYTKHV-MGPYMKYSSGYWPSPETTFEESETHMLALYAERSELQDGMKLMDLGCGWGSVSLYMAERFPNCQITSVSNSRDQKAYIEDQCQKRGLTNITVYTSDINVFEPPH--KNHYDRVISIEMFEHMKNYQELLKRVASWMAPGGKLFVHIFTHKTHPYHF--DKGWMAQTFFTGGTMPSDDLLMYFQ 271
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A7S3DNC6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNC6_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.290e-100 Identity = 161/274 (58.76%), Postives = 199/274 (72.63%), Query Frame = 1
Query: 10 LINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGF--GNVRVITGDINEFDLGEED--KGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHF 819
L+N LS + +I P V+ +VPDF++RFG+R Q + L +A +L K ++ +LK MPIA D ANEQHYEV A FY L LGPR KYSSG WP D+TFEESEVAMLE YC A +EDGM IVDLGCGWGSLTL LAE+YPNA IT ISNS SQ+ YI KERG+ GN+ ++T ++++ D G D KG+ DRVM++EMFEHMKNY L+ K++G+L PGGKLFVHIF HKD+ YHF + GWM+ FF+GGTMPSDDLLL+F
Sbjct: 48 LLNVLSNSTESFI-PMVKMGLVPDFLIRFGIRVQLYNHLNVLAADNVETELKNKTEIVHKLKTMPIAIATDEANEQHYEVPAKFYDLCLGPRKKYSSGLWPNKDTTFEESEVAMLEHYCQLAGVEDGMSIVDLGCGWGSLTLHLAERYPNAKITGISNSHSQREYILNTAKERGYNVGNITIVTCNVSD-DKGALDVVKGN-DRVMTVEMFEHMKNYDHLMEKVNGFLKPGGKLFVHIFTHKDYTYHF--DKGWMSDNFFTGGTMPSDDLLLYF 316
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A2A2XVR3_9BACT (SAM-dependent methyltransferase n=1 Tax=Spartobacteria bacterium AMD-G4 TaxID=1982325 RepID=A0A2A2XVR3_9BACT) HSP 1 Score: 301 bits (771), Expect = 1.600e-98 Identity = 140/257 (54.47%), Postives = 193/257 (75.10%), Query Frame = 1
Query: 58 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHED--GWMAQYFFSGGTMPSDDLLLHFQ 822
+ +N++PD +R G+R G +L++ A+ ++ Q I+ELK+ PIA + +ANEQHYEV F+ L LGPR+KYSSG+WP+ D+TF ESE AML + C+RA+L DG +++LGCGWGSLTL++AEKYP + IT +SNSA+QK +ID + +GF N+R++T D+NEF+ G+ SFDRV+S+EMFEHMKNY+LL+AK++ WL GGKLFVHIF H++ YHF +D W+ +YFF GGTMPSDDLLL+FQ
Sbjct: 8 LSRNLLPDAAIRIGIRNLLGKKLREEAKPDAIAQGEALAVFIDELKRSPIAIKTASANEQHYEVPTDFFKLVLGPRMKYSSGYWPREDTTFAESEEAMLALSCERAQLTDGQDVLELGCGWGSLTLWMAEKYPQSRITGVSNSATQKAHIDAEAVRKGFKNIRILTADMNEFEAGD---ASFDRVVSVEMFEHMKNYQLLMAKVARWLRVGGKLFVHIFTHREFAYHFEGKDPSDWITRYFFEGGTMPSDDLLLYFQ 261
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A9SDN3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SDN3_PHYPA) HSP 1 Score: 296 bits (759), Expect = 1.270e-96 Identity = 144/276 (52.17%), Postives = 197/276 (71.38%), Query Frame = 1
Query: 1 MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLH--EDGWMAQYFFSGGTMPSDDLLLHFQ 822
MA LI A M A++ NV+PD V+RFGVR+ RL +I + T Q+ + ++ LK+MPIA + AN QHYEV FYHL LG RLKYSS ++PK DST +E+E +M +Y +RA+L+DG ++D+GCGWGSL++++AEK+PN+++T +SNS +Q+ +I +C++RG NV +IT D+N F++ DK SFDR++SIEMFEHMKNY+ L+ KIS WL P G LF+HIFVHK PYHF ED WM++ FF+GGTMPS LLL+FQ
Sbjct: 1 MASLIKAGRDATLKVSMSALQMNVIPDMVLRFGVRKLLEGRLSEITKSTLEAQMQELLSFVQSLKQMPIAVHMEDANTQHYEVPTEFYHLVLGKRLKYSSAYFPKKDSTLDEAEESMFALYAERAQLQDGQSVLDVGCGWGSLSMYIAEKFPNSNVTGVSNSETQRAFITEECRKRGLSNVTIITCDMNVFNI---DK-SFDRILSIEMFEHMKNYEKLLKKISSWLKPDGLLFIHIFVHKSIPYHFEDKGEDDWMSRNFFTGGTMPSSSLLLYFQ 272
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A6U3YXE6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YXE6_9STRA) HSP 1 Score: 297 bits (760), Expect = 5.130e-96 Identity = 155/275 (56.36%), Postives = 199/275 (72.36%), Query Frame = 1
Query: 22 LSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVE-QLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFG--NVRVITGDINEFDLGEEDKGSFD------RVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHF 819
L + S +P V K ++PD +VR+G+R +CG L ++ RG S E +L K ++ LK MP+A + DAANEQHYEV AAFY L LGPR KYSSG WP S++TFEESE AML YC+RA+++DGM IVDLGCGWGSLTL+LAEK+PNA IT ISNS SQ+ +I +RG N+R++T ++++ DKG+ D VMSIEMFEHMKNY L++K+ +L P GKLFVHIF HK++ Y+F EDGWMA+ FF+GGTMPSDDLLL+F
Sbjct: 60 LLSKTSDAFIPLVYKGLIPDALVRWGIRLRCGAHLTEL-RGISAEDELQTKMEIVSSLKTMPVAIETDAANEQHYEVPAAFYELCLGPRKKYSSGLWPFSNTTFEESEDAMLAKYCERAQVKDGMNIVDLGCGWGSLTLYLAEKFPNAQITGISNSHSQREHILKTAADRGLNVDNIRIVTCNVSD------DKGALDVVKDNDLVMSIEMFEHMKNYSTLLSKVHNFLKPSGKLFVHIFTHKEYAYNF--EDGWMAENFFTGGTMPSDDLLLYF 325
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A388KJN1_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJN1_CHABU) HSP 1 Score: 295 bits (756), Expect = 5.980e-96 Identity = 146/257 (56.81%), Postives = 184/257 (71.60%), Query Frame = 1
Query: 58 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFL--HEDGWMAQYFFSGGTMPSDDLLLHFQ 822
+E NV+PD + R VR G RL + + T EQ+ IE LK+MPIA ANEQHYEV FY L LG LKYS+ ++P ++ +E+E AML MYC+RA+LEDG +VDLGCGWGSLTLF+AE+YPN+ IT+ISNSA+Q+ YI+ +C R NVRVIT DIN+ ++ E+ FDRV+SIEMFEHMKNY+ L+ KIS WL P G LFVHIF HK+ PYHF + WMA+YFF+GGTMPSD+LL +FQ
Sbjct: 20 METNVLPDQITRRAVRWLVGQRLNSLYKSTGEEQMEELTRFIESLKEMPIAVNTREANEQHYEVPTRFYKLCLGKNLKYSACYFPSEHTSLDEAEDAMLRMYCERAQLEDGQSVVDLGCGWGSLTLFVAERYPNSKITAISNSATQRAYIEEECTNRALENVRVITADINDLEIAEQ----FDRVVSIEMFEHMKNYQKLLRKISTWLKPQGMLFVHIFTHKEAPYHFEVDSDSDWMAKYFFTGGTMPSDNLLTYFQ 272
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A397UB37_9GLOM (SAM-dependent methyltransferase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UB37_9GLOM) HSP 1 Score: 294 bits (752), Expect = 1.600e-95 Identity = 138/257 (53.70%), Postives = 185/257 (71.98%), Query Frame = 1
Query: 52 PAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQ 822
P +++ ++PDF++R GVR RL++I G + RK + +LK+ PIA + ANEQHYEVS F LG R+KYS +P + T +E+E MLE YC +A+L+DGM I+DLGCGWGSL L+L EKYPNA IT++SNS++Q+ YI+G +++GF N+ VIT D+ EFD ED+ FDR++SIEMFEHMKNY+ L +KIS WL P G LFVHIF H++ PY F+ +DGWMA+YFF+GGTMPS DL +FQ
Sbjct: 20 PFLDRGIIPDFIMRLGVRNLLQVRLKEINFGDIQKNQQRKSIYVNQLKERPIAEHTNKANEQHYEVSTEFMQTCLGQRMKYSCCLFPNGNETLDEAEECMLESYCVKARLQDGMNILDLGCGWGSLCLYLCEKYPNAKITALSNSSTQREYINGIAQQKGFKNLNVITADVKEFDF--EDESKFDRILSIEMFEHMKNYEFLFSKISNWLKPQGLLFVHIFCHREQPYDFVIDDGWMAKYFFTGGTMPSADLFSYFQ 274
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Match: A0A1Z5K7V8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7V8_FISSO) HSP 1 Score: 295 bits (756), Expect = 1.660e-95 Identity = 155/273 (56.78%), Postives = 197/273 (72.16%), Query Frame = 1
Query: 28 TAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSV-EQLARKEALIEELKKMPIATQQDAANEQHYEVSAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFG--NVRVITGDINEFDLGEEDKGSF------DRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHF 819
+A++ +P ++ ++PD ++R+G+R Q L I +GTS E L K +I++L++ PIA + AANEQHYEV AAFY L LGP KYSSG+WP +TFEESE+ MLE+YC RA+L+DGMKIVDLGCGWGSLTLFLA KYPNA ITSISNS SQ+ YI RG N++VIT ++ + D+G+ DRVM+IEMFEHMKNY+ L+ K+ G+L PGGKLFVHIF HKD+ YHF E GWM+ FF+GGTMPSDDLLL+F
Sbjct: 52 SALTESFIPLIQMGLIPDCLIRWGIRLQLRDHLH-ILQGTSCQENLTTKMKIIQQLRQQPIAIETTAANEQHYEVPAAFYDLCLGPCKKYSSGYWPTPQTTFEESELHMLELYCQRAELQDGMKIVDLGCGWGSLTLFLAAKYPNAKITSISNSHSQRDYILSTAAARGLNVQNIQVITCNVAD------DQGALRVVRDNDRVMTIEMFEHMKNYQSLLQKVQGFLKPGGKLFVHIFTHKDYAYHF--EQGWMSDNFFTGGTMPSDDLLLYF 315 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7347.18512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7347.18512.1 >prot_Ecto-sp13_S_contig7347.18512.1 ID=prot_Ecto-sp13_S_contig7347.18512.1|Name=mRNA_Ecto-sp13_S_contig7347.18512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp MAGLINTLSTAVSPYIMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSback to top mRNA from alignment at Ecto-sp13_S_contig7347:130..5969- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7347.18512.1 ID=mRNA_Ecto-sp13_S_contig7347.18512.1|Name=mRNA_Ecto-sp13_S_contig7347.18512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7347:130..5969- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7347:130..5969- >mRNA_Ecto-sp13_S_contig7347.18512.1 ID=mRNA_Ecto-sp13_S_contig7347.18512.1|Name=mRNA_Ecto-sp13_S_contig7347.18512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7347:130..5969- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |