prot_Ecto-sp13_S_contig7337.18501.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7337.18501.1
Unique Nameprot_Ecto-sp13_S_contig7337.18501.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length283
Homology
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 8.600e-180
Identity = 264/288 (91.67%), Postives = 271/288 (94.10%), Query Frame = 0
Query:    1 MNEEELAFVRGVLMTKQEKVRLKQEKLHQQLASRGYAGTELVSIGSSGAADAASGR------GDVISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLASSTRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEPLGGGPWGGGGEDAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIDMVLVDDDLDADLTLAGAV 282
            MNEEELAFVRGVL TKQEKVRLKQEKL QQLASRGY+GTELVSIGSSGAADAA GR      G+VISLEAFVEFSLWWAPLMTTLSLLRNDWAST+PTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR SSMLAS+  SRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSM+VLYPDVRKEDAFDEP GGGPWGGGG DAALSD+M LYPQP DV RLSGPVGVVTLEEWGSRP+DMVLVDDDLDADLTLAGAV
Sbjct:   54 MNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADAAFGRDGGNGNGNVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMEVLYPDVRKEDAFDEPSGGGPWGGGGGDAALSDSMPLYPQPSDVTRLSGPVGVVTLEEWGSRPLDMVLVDDDLDADLTLAGAV 341          
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 3.510e-167
Identity = 265/296 (89.53%), Postives = 268/296 (90.54%), Query Frame = 0
Query:    1 MNEEELAFVRGVLMTKQEKVRLKQEKLHQQLASRGYAGTELVSIGSSGAADAASGRG-----------DVISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLASSTRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEPLGGGPWGGGGE---DAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIDMVLVDDDLDADLTLAGAV 282
            MNEEELAFVRGVL  KQEKVRLKQEKL QQ ASRGYAGTELVSIGSSGAADAASGR            DVISL+AFVEFSLWWAPLM TLSLLRNDWAST+PTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSML S+ RSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEP GGGPW        DAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIDMVLVDDDLDADLTLAGAV
Sbjct:  718 MNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEPSGGGPWXXXXXXXXDAALSDTMSLYPQPPDVARLSGPVGVVTLEEWGSRPIDMVLVDDDLDADLTLAGAV 1013          
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 7.850e-42
Identity = 97/236 (41.10%), Postives = 128/236 (54.24%), Query Frame = 0
Query:    5 ELAFVRGVLMTKQEKVRLKQEKLHQQLASRGYAGTELVSIGSSGAADAASGRGDVISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVT--------------------------QAAPRASSMLASSTRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDE 214
            +L F+RG+L   QE V           A  G  G E   +G         GR D +S+EAF  FS WWAPLM TL ++RNDWA+T P RVHGF+SR+A++R L++RE GTFLLRFSES+ G LV+SFT+                             Q +P    ++    + R   +S+ VKH LVEV+ GG C I+ E+G    Y SLHD V     ++ LYPD+ KE+AF E
Sbjct:  221 QLEFIRGILRRGQEAVAK---------ARWGATGDECTEVGG-------DGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFISCAGRLACCLQGSPINPRIVLQQFQLRSGRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYGSLHDFVRQIPELKKLYPDIPKEEAFGE 440          
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 9.060e-41
Identity = 101/230 (43.91%), Postives = 129/230 (56.09%), Query Frame = 0
Query:    5 ELAFVRGVLMTKQEKVRLKQEKLHQQLASRGYAGTELVSIGSSGAADAASGRGDVISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLASSTRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEPLGGGPWGGGGEDAALSDTM 234
            +L F+RG+L   QE V           A  G  G E   +           R D IS+EAF +FS WWAPL++TL ++RNDWA T P RVHGF+SR+AA+R L++RE GTFLLRFSES+ G LV+SFT+      P  S          P  +S+ VKH LVEV+ GG C I+ E+G    Y SLHD V     ++ LYPD+ KE+AF E     P    G  AA  D +
Sbjct:  718 QLEFIRGILRRGQEAVAR---------ARWGATGDECPEVDG-------GCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQ------PSVS----------PGRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGETPRSPPATASGPGAARRDEL 915          
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.610e-28
Identity = 71/159 (44.65%), Postives = 86/159 (54.09%), Query Frame = 0
Query:   55 GRGDVISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLASSTRSRPRSQSMCVKHCLVEVRRGGWCYIEV-EQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDAF 212
            GR D IS+E F +FS WW PLM TL ++RNDWA T P  VHGFI R+  +  L  R RG FLLRFSES PG+LV+S   H                            H LVEV  GG CY+ V +QG++  Y SLHDLV     ++ LY D+  E  F
Sbjct:  921 GRYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENL-RRARGAFLLRFSESHPGKLVISRAYH----------------------------HSLVEVTEGGRCYMTVNQQGTRREYESLHDLVTQNGQLRHLYQDIPMEQVF 1050          
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Match: A0A7S2F5D4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5D4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.920e-7
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   60 ISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTE 133
            +S    V    WW P+++ ++LL   W      ++HG + R  A++ LL R+ GTFL RFS SQP  LV+S  E
Sbjct:   68 VSRSMLVALKKWWTPVLSIVTLLPGPWQQW---QIHGMLDRATADQLLLNRQPGTFLFRFSGSQPQFLVISVLE 138          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7337.18501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KJ41_9PHAE8.600e-18091.67SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNX8_ECTSI3.510e-16789.53SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPT3_9PHAE7.850e-4241.10SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI9.060e-4143.91SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY6_ECTSI1.610e-2844.65SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2F5D4_9STRA3.920e-739.19Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000980SH2 domainSMARTSM00252SH2_5coord: 95..202
e-value: 5.7E-10
score: 49.1
IPR000980SH2 domainPFAMPF00017SH2coord: 95..193
e-value: 3.4E-11
score: 43.1
IPR000980SH2 domainPROSITEPS50001SH2coord: 93..193
score: 11.976
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 93..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7337contigEcto-sp13_S_contig7337:140..1932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7337.18501.1mRNA_Ecto-sp13_S_contig7337.18501.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7337 96..3242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7337.18501.1 ID=prot_Ecto-sp13_S_contig7337.18501.1|Name=mRNA_Ecto-sp13_S_contig7337.18501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
MNEEELAFVRGVLMTKQEKVRLKQEKLHQQLASRGYAGTELVSIGSSGAA
DAASGRGDVISLEAFVEFSLWWAPLMTTLSLLRNDWASTDPTRVHGFISR
IAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLASST
RSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQ
VLYPDVRKEDAFDEPLGGGPWGGGGEDAALSDTMSLYPQPPDVARLSGPV
GVVTLEEWGSRPIDMVLVDDDLDADLTLAGAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR036860SH2_dom_sf