mRNA_Ecto-sp13_S_contig7327.18494.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7327.18494.1
Unique NamemRNA_Ecto-sp13_S_contig7327.18494.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: D7FZR4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR4_ECTSI)

HSP 1 Score: 646 bits (1666), Expect = 3.410e-233
Identity = 340/344 (98.84%), Postives = 340/344 (98.84%), Query Frame = 1
Query:   61 MGPKKSDKKAIKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRDSGGGGKKXXXXXXXKKKK 1092
            MGPKKSDKKA KGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQ  IVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLI SLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRDSGGGGKKXXXXXXXKKKK
Sbjct:    1 MGPKKSDKKATKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQ--IVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRDSGGGGKKXXXXXXXKKKK 342          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A835YWH7_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH7_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 7.500e-151
Identity = 228/340 (67.06%), Postives = 272/340 (80.00%), Query Frame = 1
Query:   61 MGPKKSDKKAIKGVDGE-VQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPAL--EQNRIKHFLVDATLPTPLFEALHRRDSG----GGGKK 1059
            M PKK  K A K  +GE V GEDP   L NYQ+F RLIG+  NPKVV+QLQ  E+ P+ Q  +VVDDE GPLGPGGTRAL T+I+GTGQDM+GGPY+L+  LRLWR +C DEG RSI+E+LRLGG ++KLEY+E+ D  +G TGA ALGQ+L+ GCN+SLLSLKLDYN +LGSEG  ALCRGLRTN++L+QLHLPYC +G DAGA LGEMLSY+KLQLAVLNLQGNRL  EG + L+PGLARN S+ YLSLADN IG    DV+AL  FRDA+++C+TL+HVDLLYNRIG  GA  +LPAL  +  +I+ FLVDATLPTPLF+ALHRRD+G    GGGKK
Sbjct:    1 MPPKK--KAAKKEHNGEAVAGEDPLQLLNNYQKFCRLIGVPINPKVVSQLQDQEHLPITQ--LVVDDEFGPLGPGGTRALTTSILGTGQDMKGGPYKLLKGLRLWRVNCADEGTRSISEILRLGGGDIKLEYLEMLDCRVGGTGALALGQALAAGCNRSLLSLKLDYNQTLGSEGARALCRGLRTNATLRQLHLPYCGVGGDAGAALGEMLSYSKLQLAVLNLQGNRLGGEGLRDLAPGLARNGSVTYLSLADNAIGGVARDVEALALFRDAILACTTLSHVDLLYNRIGPDGATTLLPALAPDNAQIRQFLVDATLPTPLFDALHRRDAGAKKKGGGKK 336          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A7S3HG08_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG08_9STRA)

HSP 1 Score: 336 bits (862), Expect = 6.660e-111
Identity = 178/338 (52.66%), Postives = 237/338 (70.12%), Query Frame = 1
Query:   52 VNAMGPKKSDKKAIKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCS-TLTHVDLLYNRIGERGARVMLPAL--EQNRIKHFLVDATLPTPLFEALHRRDSGGGGK 1056
             N M PKK + KA  G    V+GEDP + LQNYQ+F + IG+  N  V   L  +E  P+ Q  +++DDE GPLGPGGTRALMTA+MG+G  M+GGPY+L+NSLR+WRA+C D+GA +IAE+LRLGGA+VKL ++ELFD+NIGP GA ALG +LS G N SLL+LKLDYN +LG EG   LC+GLRTN++LKQLHL +C+L S +G  L E+L+ ++  L V N+ GNRL  +G  +L  GL  N     + LADN I   + D+  L   ++ +++ +  LT VDL+YNRIGE GA++++ A+  E  +IK FLVD TLP P+FE L R+   GGGK
Sbjct:    2 TNLMPPKKKEGKAAAGE--AVEGEDPVVLLQNYQKFCKSIGLPVNTIVTKNLNDEEKYPVHQ--LLIDDEFGPLGPGGTRALMTAVMGSGAGMKGGPYKLLNSLRMWRANCSDDGAAAIAEILRLGGADVKLSFLELFDNNIGPKGANALGSALSYGHNLSLLTLKLDYNATLGDEGVINLCKGLRTNATLKQLHLQFCNLSSASGPALSEVLANSRSGLEVFNIGGNRLGGQGLASLCVGLMHNTKCETICLADNMIDQMEDDIIGLTALKECLLNPTLALTSVDLMYNRIGEAGAKILIEAVNPENTKIKEFLVDLTLPMPIFEQLFRK---GGGK 332          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A482S5Z2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Z2_9ARCH)

HSP 1 Score: 301 bits (771), Expect = 1.030e-97
Identity = 171/309 (55.34%), Postives = 215/309 (69.58%), Query Frame = 1
Query:  175 ISANPKVVAQLQSDENQPLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKAL-SPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMM-SCSTLTHVDLLYNRIGERGARVMLPALEQN--RIKHFLVDATLPTPLFEALHRRDSGGGGKKXXXXXXXKKK 1089
            +S N  +   L  +E  P+ Q  +++DDE GPLGPGGTRALMTAIMG+G  M+GGPY+L+ SLRLWRA+CGD+GA +IAEVLRLGGA+V L Y+EL D+NI   GATALG SLS G N SLL+LKLDYN +LG +G  ALCRGLRTN SL+QLHL +C+L S +G  L ++L+ ++  L VLN+ GNRL  +G   L + GL  N     L+L+DN I   + D+  L   RD +M S S LT VDL+YNRIGERG  V++ ALE    +IK FLVD TLP PLFE L ++ +GG GKK       KKK
Sbjct:    1 MSTNSLIGRTLNDEEKYPIEQ--LLIDDELGPLGPGGTRALMTAIMGSGPGMKGGPYKLLKSLRLWRANCGDDGAAAIAEVLRLGGADVALTYLELLDNNISIRGATALGSSLSFGHNISLLTLKLDYNQTLGDDGLVALCRGLRTNMSLRQLHLQFCNLTSASGHALADLLANSRSALEVLNVAGNRLTGQGVYVLCTKGLVVNTKCETLNLSDNLIDQLEEDLAGLTALRDCLMTSTSGLTSVDLMYNRIGERGGLVLVEALESEGCKIKEFLVDLTLPMPLFEKLFKK-AGGKGKKAKGKKGGKKK 306          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A8J2X6V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X6V8_9STRA)

HSP 1 Score: 286 bits (732), Expect = 3.310e-91
Identity = 160/337 (47.48%), Postives = 209/337 (62.02%), Query Frame = 1
Query:   82 KKAIKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQ---PLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMM-SCSTLTHVDLLYNRIGERGARVMLPALE----------QNRIKHFLVDATLPTPLFEALHRRDSGGG 1050
            KK    +D +    +P   + NY+++ +L  ++ +PKV+AQL  DE Q    +    +V+D E   LGP GTRAL TA+MG    M G  +++  + R WR  CGD+GA  +AE+LRLGGAE+ + Y+E+ D  +G  GA ALGQSL  G N+SLL+LKLDYN SLGS+G  ALC+GLRTN+SLKQLHL YC L  DAGAPLGE+LSY K  L  L+LQGN++   G   +  G+  N  L YLSLADN I + D D++ALE     M    S L+ VDLL+NRIGE+GA  ML A              +I+   VD +LP  LF  L R D+G G
Sbjct:    5 KKGGSAIDPDDPSMNPEAVVDNYKKYCKLAALTPHPKVLAQLGGDEEQLEIMMKNEQLVIDGEP-VLGPHGTRALCTALMGNAPGMSGAVFKMAKNFRFWRMDCGDDGAACLAEILRLGGAELPMAYLEMLDCGVGYRGAHALGQSLMCGQNRSLLTLKLDYNSSLGSDGCKALCQGLRTNASLKQLHLCYCGLDEDAGAPLGEVLSYAKTTLQKLHLQGNKMRGGGLSGILSGMDNNNKLEYLSLADNAIAATDEDLEALEQLAGVMQRETSLLSQVDLLHNRIGEKGANTMLAAFNGGELEGSKGPPGKIQMLQVDHSLPDQLFNTLGRLDAGKG 340          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A7S1XUG2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUG2_9STRA)

HSP 1 Score: 254 bits (650), Expect = 5.260e-76
Identity = 151/332 (45.48%), Postives = 211/332 (63.55%), Query Frame = 1
Query:   61 MGPKKSD-KKAIKGVDG-EVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQACIVVDDEHGPLGPGGTRALMTAIM---GTGQDMRG-GPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGI-GSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPALEQN-RIKHFLVDATLPTPLFEALHR 1032
            MGPKK   KKA    DG E +  +P     N+ +  + IG   NP +VAQLQS+E    ++  I++D E  P+GP G RAL TA++   GT   + G GPY  ++SLR+W    GD+G  ++AE+LRLGGAEVK+ Y+EL D  + P GA  LG++LS G N SLL+LKL+ N +LGS G AALCRGLR+NS LKQLHL +C++G D G PL E LSY++  L VL ++GNRL   G + L+ G+  N+SL  L ++DN I G    ++D L  F  A+ + +TL +V+++YNR+ + G   + PA+E N  +  FLVD  L   L+ AL +
Sbjct:  250 MGPKKKGGKKAAPAGDGKEDESANPLTLCTNFTKICKTIGQQPNPGLVAQLQSEE---FSKTQIIIDGEP-PIGPAGMRALATAVLAPPGTPGLVAGCGPYTPLSSLRVWGGGLGDDGVSAVAEILRLGGAEVKISYLELLDSGVSPYGARMLGRALSYGSNMSLLTLKLNCNLNLGSAGVAALCRGLRSNSVLKQLHLEFCNIGPDGGGPLAEALSYSRTALQVLCMKGNRLGNVGLRDLATGIQLNQSLTTLDVSDNAINGYTFEEIDCLAAFAQAVKASTTLANVNIMYNRLTDGGGEALKPAVEGNGTLGTFLVDTQLSEELYAALFK 577          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A7S2XX61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX61_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.980e-75
Identity = 124/196 (63.27%), Postives = 155/196 (79.08%), Query Frame = 1
Query:   70 KKSDKKAIKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQ-PLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDL 654
            KK DKK  + V+G VQGEDPA+ LQNY +FS+LI I  N ++V     +E + P+ Q  +VVDD  G LGPGGTRAL TAI+GTG  M+GGPY+ + SLRLWR + GD+GA+ +AE+LRLGG +V + Y+ELFD+NIGP GA ALG +LS G N+SL++LKLDYN SLG+EGTAALCRGLRTNS+LKQLHLPYC+L
Sbjct:    5 KKGDKKKKQDVEG-VQGEDPAILLQNYVKFSKLIAIPVNQQIVDTCSDEELEGPVEQ--LVVDDRKGVLGPGGTRALCTAILGTGPGMQGGPYKKLKSLRLWRCNVGDDGAQCMAELLRLGGGDVVIPYLELFDNNIGPRGALALGNALSFGTNQSLMTLKLDYNISLGAEGTAALCRGLRTNSTLKQLHLPYCNL 197          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A7S2G5E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5E5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.550e-71
Identity = 153/357 (42.86%), Postives = 201/357 (56.30%), Query Frame = 1
Query:   16 RYQAERDPTTTGVNAMGPKKSDKKAIKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQACIV-----VDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCST-LTHVDLLYNRIGERGARVMLPALEQN--RIKHFLVDATLPTPLFEALHRRDSGG-GGKK 1059
            R QA R  T      M PKK D       + +  GEDP  FL  Y++F ++  I    ++  Q  SDE  P A   ++     +D     LGPGGTRAL TAIMGTG  M   P++ + SLR+W ++ GD+G +++AE+LRLGGAE+++ Y+                                                GLRTNSSLKQLHLPYC+L S  G PL EMLSYT+L L +LNL+GN++  +G   L PGL +++SLV L L+DN IG  + D++AL  F  A+M  S  L ++ LLYNRIGE GA  +LPAL+ +  RI+ FLVD TLP PLFEAL R  +GG GGKK
Sbjct:   26 RLQAHRSGT------MPPKKKDGAKKSNAEPD-PGEDPETFLAQYKKFCKMTAIPECEQIT-QAFSDEENPYAGQFVIHPNEPMDPTEPRLGPGGTRALATAIMGTGPGMVT-PFKSVKSLRIWWSNIGDDGCQALAELLRLGGAEIQINYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRTNSSLKQLHLPYCNLDSAVGQPLSEMLSYTRLGLTMLNLKGNQIRGQGLLELCPGLEKSKSLVDLDLSDNDIG--EQDIEALNAFAVALMMPSVALANISLLYNRIGEAGANALLPALDPSNKRIQQFLVDETLPPPLFEALSRVSAGGKGGKK 371          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A7R9U7G5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G5_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.690e-69
Identity = 142/323 (43.96%), Postives = 199/323 (61.61%), Query Frame = 1
Query:  124 DP-ALFLQNYQRFSRLIGISANPKVVAQLQ-SDENQPLAQAC--IVVDDEHGPLGPGGTRALMTAIMGTG--QDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMS---CSTLTHVDLLYNRIGERGARVMLPALEQN--RIKHFLVDATLPTPLFEALHRRDSGGGGKK 1059
            DP A  L+N++   RL+    N ++++QL  SDE+    +    IVV+ +   L PG  RAL  A++       M G  Y  + +L++WR++ G  G  +IAE+LRLGGA+++L  +EL D  +   GA ALG+SL+ G N SL  L+LDYNP +GSEG AAL RGLRTN SL++LH  +C LG +AG  L ++L +++  L VLN+QGNRLE  G   ++ GL  N +L+ L++ADN IG+ + DV AL      + S    S LT VDL +NRIG  G  V++P L+ N  RIK FLVD ++P  +F ALHR     G KK
Sbjct:    6 DPTANVLRNFKCMCRLLNEDINQEILSQLSISDEDAKKGKGVSEIVVEAD---LTPGNARALAAALLAPPGMSKMLGDVYTALKTLKIWRSNLGASGVSAIAELLRLGGADLQLALLELVDAGVEIDGAVALGRSLATGMNVSLRILRLDYNPGIGSEGIAALSRGLRTNRSLEELHACFCSLGPEAGVFLADILEFSQSSLRVLNVQGNRLEGVGLNDVAHGLMENSALLELNVADNAIGNSELDVVALRVLAQVISSGNPISALTSVDLQHNRIGFEGGSVLVPCLQANNKRIKTFLVDFSIPAEIFTALHRTGDKSGKKK 325          
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Match: A0A024UFZ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFZ4_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.890e-67
Identity = 140/349 (40.11%), Postives = 200/349 (57.31%), Query Frame = 1
Query:   61 MGPKKSDKKAIKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQS---DENQPLAQACIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPAL---EQNRIKHFLVDATLPTPLFEALHRRDSGGGGKKXXXXXXXKKK 1089
            MGPK   K+     + E  G   A+ + +Y +  R IG+  N  V   ++    + ++ LAQ  +VVD+E G LG GG RA+  A +GT      GPY+ + ++R+W    GDEGA +I+ +L  G A V + YVEL D +IGP G   L  +L       L +LKL+ N  +G++G  ALC+GL  N ++KQLHL +C++ SD G  L ++L   K  L  L+LQGN L   G   +S GL R++SLV L+++DNGI     DVDAL  FRDA++ C TLT +   +N I   GA ++LPAL   E +R+  F VDA+LP  +F+ L+R +   G KK       KKK
Sbjct:    1 MGPKAKKKEP----EPEDNGVTRAMVVASYTKMCRAIGVPVNAHVTEMIKGKGEEADEKLAQ--VVVDEEFGNLGNGGIRAMTCAFLGTVPHNNTGPYQHLANVRVWNNAIGDEGASAISTLLSEGSALVNVLYVELMDCDIGPEGCAMLADALKPERKSPLQTLKLNCNNKIGNDGVYALCQGLFANHTIKQLHLDFCNVSSDGGVVLAQLLCMAKSALETLSLQGNMLGDAGLLNISKGLKRSQSLVKLNVSDNGIRK---DVDALTTFRDAILRCKTLTTIKFAFNFIDAEGADILLPALSSAEGSRVTVFEVDASLPPDVFQKLNRGEKADGKKKKGGKKGKKKK 340          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7327.18494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR4_ECTSI3.410e-23398.84Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835YWH7_9STRA7.500e-15167.06Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A7S3HG08_9STRA6.660e-11152.66Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482S5Z2_9ARCH1.030e-9755.34Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J2X6V8_9STRA3.310e-9147.48Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1XUG2_9STRA5.260e-7645.48Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2XX61_9STRA2.980e-7563.27Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2G5E5_9STRA1.550e-7142.86Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7R9U7G5_9STRA1.690e-6943.96Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A024UFZ4_9STRA1.890e-6740.11Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7327contigEcto-sp13_S_contig7327:1267..4440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score653.3
Seed ortholog evalue6.7e-185
Seed eggNOG ortholog2880.D7FZR4
Model size1095
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.interleukin-8 biosynthetic process
EggNOG OGsKOG4308@1,KOG4308@2759
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-21_004060.1
Cds size1095
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7327.18494.1prot_Ecto-sp13_S_contig7327.18494.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7327 1267..4440 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464001.2685032-CDS-Ecto-sp13_S_contig7327:1266..14191681464001.2685032-CDS-Ecto-sp13_S_contig7327:1266..1419Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7327 1267..1419 -
1681464001.2806478-CDS-Ecto-sp13_S_contig7327:1668..18811681464001.2806478-CDS-Ecto-sp13_S_contig7327:1668..1881Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7327 1669..1881 -
1681464001.289815-CDS-Ecto-sp13_S_contig7327:2444..26851681464001.289815-CDS-Ecto-sp13_S_contig7327:2444..2685Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7327 2445..2685 -
1681464001.2990782-CDS-Ecto-sp13_S_contig7327:3079..32431681464001.2990782-CDS-Ecto-sp13_S_contig7327:3079..3243Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7327 3080..3243 -
1681464001.3094268-CDS-Ecto-sp13_S_contig7327:3703..37841681464001.3094268-CDS-Ecto-sp13_S_contig7327:3703..3784Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7327 3704..3784 -
1681464001.3205197-CDS-Ecto-sp13_S_contig7327:4197..44401681464001.3205197-CDS-Ecto-sp13_S_contig7327:4197..4440Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7327 4198..4440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7327.18494.1

>prot_Ecto-sp13_S_contig7327.18494.1 ID=prot_Ecto-sp13_S_contig7327.18494.1|Name=mRNA_Ecto-sp13_S_contig7327.18494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
GYISGRYQAERDPTTTGVNAMGPKKSDKKAIKGVDGEVQGEDPALFLQNY
QRFSRLIGISANPKVVAQLQSDENQPLAQACIVVDDEHGPLGPGGTRALM
TAIMGTGQDMRGGPYRLINSLRLWRAHCGDEGARSIAEVLRLGGAEVKLE
YVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCR
GLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAE
GTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTH
VDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRDSGGG
GKKGKKGGKGKKKK*
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mRNA from alignment at Ecto-sp13_S_contig7327:1267..4440-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7327.18494.1 ID=mRNA_Ecto-sp13_S_contig7327.18494.1|Name=mRNA_Ecto-sp13_S_contig7327.18494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7327:1267..4440- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTTACATATCAGGGCGATACCAAGCGGAAAGAGACCCCACCACAACAGG TGTGAACGCTATGGGGCCAAAAAAAAGTGACAAGAAGGCAATAAAAGGAG TGGATGGCGAGGTTCAAGGCGAGGATCCCGCGCTGTTCTTGCAGAACTAT CAGCGGTTCAGCAGGCTGATCGGCATCTCCGCCAACCCGAAAGTCGTCGC ACAGCTTCAAAGTGACGAAAACCAGCCCCTTGCACAGGCATGTGTGCGTC GTTGTTCTTTTCTGGTCTGTGTTTTTCGTAGGATGTGCTCATGTTATGTA TTTATTGGATTGAACTGTGGTCTTGACCAATGAAACTGCTTGAGTTTTAG TACAGGCAGTGTCGTAGTCTTGTCTACCAAGCTTTAAACGGAATAGGGAA TGCAGATCTTACTCTCGAATCGGAATCTTTTTAATCCGACTTGAAGTATC TATTATCCACCAGGCGCCGCTCAATCCTCGCTGCAATGACTTCAACTCAT CCCTTCGAGCGGGTAAGCTTTGATGTGTGTGTTGTCGCAAGGATATACCA TATGTTATCACGCTTCTTGAGGCCTTACCCGGGAGTCAGATACTACCGTA CAATCTACGGGTTGATAAACGCAGGCCGTTCTGCCCGCTATTGTTGGAAC TTGCAGATCGTTGTGGACGACGAGCACGGGCCTCTCGGACCGGGAGGGAC CCGAGCCCTCATGACGGCCATCATGGGTACTGGACAGGTACTCGTACAGC GGAACTGTAGACTTACAGTATTAGTCTGTGCCCCAAACTGTGGACTACAG CAGTGCTCTACGAGGAAGACGTCATGTCATCGTACTCTGGATTTTACCGC GTCGGCAAACCACGTGCCCGCCGCTTCCGATAATCACCTCGGTGCCCCAC TCAGACCCCAATAGTGAGACAGCTTAGACTACGCTGCAGGGGTCAATGCT TGCCCGTCAACTTCACACGAGCATGAGCCGTCACCGAACAAGAAAGAAAA CTACGCTTTTCGCGAATAGTGGCATGTTGTCTTGACCTGTTCCAGTGGCT ACTGGGGTACAAGTCCTTCGGCTGCAAACCATGAAGAAAAATGTTCAAAA CGTCCGCTGGTTGACTCCGCCTTAGAAACACGGACGATTCACGTATCTGA TACGGAGGCCTGCAAGACATCCATGTTTTTCGTGTTTCCTCCGCTAGGAC ATGCGCGGCGGGCCGTATCGCCTCATCAACAGCCTACGGCTGTGGCGCGC CCACTGCGGCGACGAGGGGGCGAGGAGTATCGCGGAGGTGCTGCGACTTG GAGGTGCCGAGGTGAAGCTGGAGTACGTGGAGCTCTTCGACGACAATATC GGCCCGACGGGGTACGGGGGGCGGCGTGGTCACCAAGCCCGTTGCTGATG CGCGAGTTAGAGACCGTTGCTCTTGGAGATACGGTCGCCCACGGCTATGC CATGTTTTTGAGCACGTTCTGCAGATCCTCGATGCCATCAGGTTTCCGTC AAACTTCGTCAGTTGTCGGGTCTTCCGATCGACCGAGCACTTCAGCTAAA CAAACACCCTGGAAGAAGAAAATACGGTATCGGAGGAAGTGCCGCATGGG CGTATACCCTTACTCACGACATGCTGTCCCATCCGGTTACACGAACTCAG TGTTTTTCATTATTTGTGTCCTCTTGAAAGTGACGAGCATCCTACCGAAC ACTTAAACGGACCACCATCATTGATTTGCAAACTATCGACATCCACGCAA CGCAGCGCTACCGCGTTGGGACAGTCCCTGAGCATCGGGTGCAACAAGTC CCTTCTATCCCTCAAGCTGGACTACAATCCGTCCCTAGGGAGCGAGGGCA CCGCCGCGCTTTGCCGGGGGCTTCGCACAAACTCGTCGCTCAAGCAGCTG CACCTCCCGTACTGCGACCTCGGATCAGACGCCGGGGCCCCCCTCGGCGA GATGCTGTCGTACACGAAGCTGCAGCTCGCCGTACTTAACCTCCAGGTGT ATTTTTTTGCCAATGATATCGTAAAGTGCTTTCTTTTTCTGTTTTTCGGG GTTTGGTTTTGTTGTTCAGATTTGCTGTCTCGGTCTCTTCTATATAGTAC TCGCACCGGGTGTCCATTGGATGTAACGTTCAGACTTTCTGTCTTGGTCG CTTCCATTTTGTGCTCGGTTCGCGTTTCCATCGTGTGGTTTTACCCTTCG ATATCCAACCCTTCCGTCCTTGCCTCTTGGGATATCAGCTCCCTCGCACG TTCCGAGCGCTCCCAAGGAACCCCAAGGACACCTCTACCGTGTTGCTGTA GGAAGCGTATTATGATTGGTCAACCCTTGACGGTGTCTCAAGCTGTTTCG AGCAACGAACGTGTTGTCCGCCGTTCACGCAAGGGCGCTACATACGCTGA ACGACGCAGATACCACTTCAGCTTCGTACATGGTGGAAAACGAGAGCAAA TGACACATGTGTGAGAAACGTCTCTCCCATAGTCCCCCCACCTATCTATA CTGCTCCTTCTGAACCCCCGCAATCCCCGCTGCTCAACCGCTTGGGTTTC CTCCGCCAGGGCAACCGGCTAGAAGCGGAGGGAACCAAGGCCCTGTCGCC GGGGCTCGCCCGCAACCGGTCACTGGTGTACCTGTCGCTGGCAGACAACG GCATCGGGTCGGGTGACGCTGACGTCGACGCCCTGGAGGACTTCCGAGAC GCCATGATGAGCTGCTCGACCCTCACTCATGTGGACCTCCTGTACAACCG CATCGGGGAGCGAGGAGCTCGGGTGAGAGAGGAGGCAGGCCGTTGAGGGG GGGGAGGGATATGCTCCGGCCTGTTCTTCTGTTCTTCTTCTTCATCATTA CCATAAAGTTCCATACTAAAGTAGTAGGGTGCCCTCGGCCAGGATTTCAC TGCCCTGGCTTAACGACCCCCAGCATTCGCGCACTGGCCCGCTGCGCTTG GCTGATATCGCACGCACTGCGAAAAAGTCATATTCGTTGCCGGTGTGTTG TGCCGAAACGGATGAAAAAAGGTAATGCTCCCGGCGCTGGAGCAGAACAG GATCAAGCACTTCTTGGTGGACGCGACGCTGCCCACCCCTCTGTTTGAGG CACTCCACCGCAGGGATTCGGGTGGAGGGGGCAAGAAGGGCAAGAAGGGG GGCAAGGGGAAAAAGAAAAAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7327:1267..4440-

>mRNA_Ecto-sp13_S_contig7327.18494.1 ID=mRNA_Ecto-sp13_S_contig7327.18494.1|Name=mRNA_Ecto-sp13_S_contig7327.18494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1095bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7327:1267..4440- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTTACATATCAGGGCGATACCAAGCGGAAAGAGACCCCACCACAACAGG
TGTGAACGCTATGGGGCCAAAAAAAAGTGACAAGAAGGCAATAAAAGGAG
TGGATGGCGAGGTTCAAGGCGAGGATCCCGCGCTGTTCTTGCAGAACTAT
CAGCGGTTCAGCAGGCTGATCGGCATCTCCGCCAACCCGAAAGTCGTCGC
ACAGCTTCAAAGTGACGAAAACCAGCCCCTTGCACAGGCATGTATCGTTG
TGGACGACGAGCACGGGCCTCTCGGACCGGGAGGGACCCGAGCCCTCATG
ACGGCCATCATGGGTACTGGACAGGACATGCGCGGCGGGCCGTATCGCCT
CATCAACAGCCTACGGCTGTGGCGCGCCCACTGCGGCGACGAGGGGGCGA
GGAGTATCGCGGAGGTGCTGCGACTTGGAGGTGCCGAGGTGAAGCTGGAG
TACGTGGAGCTCTTCGACGACAATATCGGCCCGACGGGCGCTACCGCGTT
GGGACAGTCCCTGAGCATCGGGTGCAACAAGTCCCTTCTATCCCTCAAGC
TGGACTACAATCCGTCCCTAGGGAGCGAGGGCACCGCCGCGCTTTGCCGG
GGGCTTCGCACAAACTCGTCGCTCAAGCAGCTGCACCTCCCGTACTGCGA
CCTCGGATCAGACGCCGGGGCCCCCCTCGGCGAGATGCTGTCGTACACGA
AGCTGCAGCTCGCCGTACTTAACCTCCAGGGCAACCGGCTAGAAGCGGAG
GGAACCAAGGCCCTGTCGCCGGGGCTCGCCCGCAACCGGTCACTGGTGTA
CCTGTCGCTGGCAGACAACGGCATCGGGTCGGGTGACGCTGACGTCGACG
CCCTGGAGGACTTCCGAGACGCCATGATGAGCTGCTCGACCCTCACTCAT
GTGGACCTCCTGTACAACCGCATCGGGGAGCGAGGAGCTCGGGTAATGCT
CCCGGCGCTGGAGCAGAACAGGATCAAGCACTTCTTGGTGGACGCGACGC
TGCCCACCCCTCTGTTTGAGGCACTCCACCGCAGGGATTCGGGTGGAGGG
GGCAAGAAGGGCAAGAAGGGGGGCAAGGGGAAAAAGAAAAAGTAG
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