prot_Ecto-sp13_S_contig122.1848.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig122.1848.1
Unique Nameprot_Ecto-sp13_S_contig122.1848.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig122.1848.1 vs. uniprot
Match: A0A6H5JA16_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA16_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.560e-6
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   20 QKQHANEETSNNRSSPQLAPEPRAPTFK 47
            QKQHANEETSNNRSSPQLAPEP APTFK
Sbjct:    3 QKQHANEETSNNRSSPQLAPEPWAPTFK 30
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig122.1848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JA16_9PHAE2.560e-696.43BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig122contigEcto-sp13_S_contig122:3763..6696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig122.1848.1mRNA_Ecto-sp13_S_contig122.1848.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig122 3763..6784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig122.1848.1 ID=prot_Ecto-sp13_S_contig122.1848.1|Name=mRNA_Ecto-sp13_S_contig122.1848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
MVWNIFQPLGEKRNRTSGGQKQHANEETSNNRSSPQLAPEPRAPTFK
back to top