mRNA_Ecto-sp13_S_contig732.18484.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig732.18484.1
Unique NamemRNA_Ecto-sp13_S_contig732.18484.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 727 bits (1877), Expect = 1.440e-260
Identity = 391/421 (92.87%), Postives = 403/421 (95.72%), Query Frame = 1
Query:  121 MAGRPAPGSCDIPECKRPRHRRAGTVHNFCGRTHAMEAVSRGLAAKLDRPHGGCNVCQLRDCSEPVFFDSDTGRXXXXXXXXXXXXXXXRGEWVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHFLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERVVLNKHAGSVCKLRYCSVRTLHHLQTGEDLEYCSERHRLLSKPPSKGQLRSSEPYVHGVYSVGSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEV 1383
            MA R APGSCDIPEC RPRH+RAG VHNFCGRTHAMEAVSRGLAAKLDRPHG C+VCQLR CS+PV+FDSDTGR  XXXXXXXXXXX  RG+W+PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSH+LTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKER+VLNKHAGSVCKLRYCSV TLHHLQTGEDL YCSE HRLLSKPPSKGQLRSSEPYVHGVYSVG+PRFNLCALDEAHPECPSLR+QFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYAR+VRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNI MRGFKLDENVGRTALARNF LRYGKGVYFSSVSGKANDYAD TAKT KDGT+LRCMFVANVAAGKAYSTKEKALDD KCPPPGYESVVGEV
Sbjct:    1 MAARTAPGSCDIPECTRPRHQRAGIVHNFCGRTHAMEAVSRGLAAKLDRPHGRCHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERLVLNKHAGSVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPRFNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEV 421          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 2.800e-122
Identity = 217/432 (50.23%), Postives = 262/432 (60.65%), Query Frame = 1
Query:  121 MAGRPAPGS-CDIPECKRPRHRRAGTVHNFCGRTHAMEAVSRGLAAKLDRPHGGCNVCQLRDCSEPVFFDSDTGRXXXXXXXXXXXXXXXRGEWVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----KSHFLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERVVLNKHAGSV--CKLRYCSVRTLHHLQTGEDLEYCSERHRLLSKPPSKGQLRSSEPYVHGVY---SVGSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEV 1383
            MA   AP   C IPEC RP H     VH+FCGRTHA EAVSRG+   L RPHG C+ C+L  CS PV+FDS     XXXXXXXXXXXXX  G+W  S                                    KSH      R C R+GCTSTAWLAN +  QYCS+ C   +     + AGS   CKL  CS   L+H QTG  L+YC E HR+ ++  + G   + + YV  ++   + G+  F LC L +AHP  PSL +QF  KWVKP+P  GISV +I  VEVPA+VR K   Y ++V N+RRRFHGTSCS  CNF VD + +PC  + C +C+I   GF L  NVG TA   NF LRYG+G+YFSSVSGKANDYAD + KT  +G RLRCMFVANVAAGKA+ T E +L  ++CPP GY+SVVGEV
Sbjct:    1 MAVPAAPSRLCGIPECTRPCHDGGTVVHDFCGRTHAEEAVSRGIRPSLRRPHGNCHECKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTSTAWLANIEGPQYCSSRCAIDDG---GQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGT--NGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEV 427          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.660e-76
Identity = 157/439 (35.76%), Postives = 219/439 (49.89%), Query Frame = 1
Query:  148 CDIPECKRPRHR-RAGTVHNFCGRTHAMEAVSRGLAAKL---DRPHGGCNV---CQLRDCSEPVFFDSDTGRXXXXXXXXXXXXXXXRGE------------WVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHFLTGQARL---CARRGCTSTAWLANTDSR--QYCSAYCFSKERVVLNKHAG-SVCKLRYCSVRTLHHLQTGEDLEYCSERHRLLSKPPSKGQLRSSEPYVHGVYSVGSPR---FNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGE 1380
            C +P+C+ P    + G VH++C RT + EA++R   A L    R  GG +    C+L  CS  V+ D  +GR                G+              P+                                 H++ G A L   C R GC+  AW+         YC + C  +  V +N   G  VC L  C      H +  ++  YC E HRL +   S G   + EP+V   +  G+     F L  L   HPE  S + QF  KW KP    G+SV+RIF+V+VP ++R + +     V N++RRFHGTSCS+ C F VD +  PCG  +C +CNI   GF+L +NVG TA   NF LRYG G+YFSSVSGKANDYA+ + KT + G ++RCMF+++V  G+A+ T E  L  ++CPPPG++SVVGE
Sbjct:   12 CALPDCQSPCFEDQDGFVHSYCSRTCSNEALARAKWASLRSSSRNRGGGSDGSRCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGE--VGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGP--NPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGE 446          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 3.260e-70
Identity = 180/384 (46.88%), Postives = 226/384 (58.85%), Query Frame = 1
Query:  148 CDIPECKRPRHRRAGTVHNFCGRTHAMEAVSRGLAAKLDRPHGGCNVCQLRDCSEPVFFDSDTGRXXXXXXXXXXXXXXXRGEWVP-----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHFLTGQAR------LCARRGCTSTAWLANTDSRQY------CSAYCFSKERVVLNKHAGSVCKLRYCSVRTLHHLQTGEDLEYCSERHRLLSKPPSKGQLRSSEPYVHGVYSVG-SPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAK 1245
            C +PEC RPRH+R G +H+FC RTHA EA   GL   L RPHG C+VCQL  C+  VFFD  T   XXXXXXXXXX    RG+W       S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       Q        +C    C   AW+ +    Q       C+  C ++  V   K     C L  C+  T+ H +T +D+ YC + HR+  K   +   ++ E +V   +  G S  F L  L ++H    SL+ QF  K+ KP   +G+SV RIF+V+VP +VR KH  +  +  N RRRFHGTSCSD C F +D +  PCG   C++C+I   GF+L  +VGRTA   N  LRYG+G+YFSSVSGKANDYA Q+ K
Sbjct:    6 CSLPECYRPRHQRRGIIHDFCSRTHAQEAADMGLIPPLHRPHGRCHVCQLHGCNTEVFFDEATNTVXXXXXXXXXXMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWMDHRSGDQLAFCGSRCAYTCGAQHLVGQMK-----CSLPGCNDFTMLHDRTMDDMGYCCDYHRI--KAEERNLTQNPEAHVDRTFRGGPSDDFKLSVLTKSHQAYSSLKEQFLVKFQKP--VDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEK 380          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 4.330e-69
Identity = 121/196 (61.73%), Postives = 144/196 (73.47%), Query Frame = 1
Query:  805 SVGSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVR-NIRRRFHGTSCSDGCNFIVDPQ--RSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEV 1383
            SVGS    L  LD+   E  +L + F T+W+KPQP  G+S+VRIF ++VP EV DKH+ Y R V  N+R+RFHGTSC+DGCNF+VDPQ   +PCGL SCS+CNI M GFKL +NV RTA A    LRYG G+YFSSVSGKANDYA  +AKT  DG  LRCMFVANVA GKA+STK+  L   +CPP G +SVVGEV
Sbjct:  454 SVGSSSSTLRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVRIFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEV 649          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: A0A6H5K349_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K349_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.130e-66
Identity = 127/231 (54.98%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  286 VCQLRDCSEPVFFDSDTGRXXXXXXXXXXXXXXXRGEWVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHFLTGQARLCARRGCTSTAWLANT--------------DSRQYCSAYCFSKERVVLNKHAGSVCKLRYCSVRTLHHLQTGEDLEYCSERHRLLSKPPSK-----------GQLRSSEPYVHGVYSVGSPRFNLCALDEAHPECPSLRNQFSTKWVKP 903
            VCQLR C E V FDSDTGR               RGEWV S                                         LC   GC    +  +T              DSRQYCSAYCFSKERV LNK+AGSVCKLRYCSV TLHHLQTGEDL Y SERHRLLS PPSK           GQLRSSEPYVHGVYSVGSPRFNLCALDEAHPECPS+RNQFSTKWVKP
Sbjct:    2 VCQLRGCLERVCFDSDTGRVYDFCCSWHANKAMDRGEWVLSPHKG-----------------------------------TSLCKLPGCKELVYRDSTKTVKRDSVRAVDVRDSRQYCSAYCFSKERVELNKNAGSVCKLRYCSVGTLHHLQTGEDLRYYSERHRLLSIPPSKARAFCAHCAATGQLRSSEPYVHGVYSVGSPRFNLCALDEAHPECPSVRNQFSTKWVKP 197          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LS85_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS85_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.870e-65
Identity = 135/305 (44.26%), Postives = 175/305 (57.38%), Query Frame = 1
Query:  508 HFLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKE-----RVVLNKHAGSV--CKLRYCSVRTLHHLQTGEDLEYCSERHRLL--SKPPSKGQLRSSEPYVHGVYSV--GSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALA--RNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEV 1383
            H    ++R CAR  C+ TA+LANT   Q+CS  C ++        VLN+       C L  C  + L    T   L +CSE HR+L   + P      S+EPY   V      +    L  LDE HPE  SL +QF++KW+  +P  G+ V+ + ++EVP EVR++H+ Y   V N+RRRFHGT  S  C F V    S C    C LCNI MRGFK+++NVG +     R   L YGKG+YFSSVSGKAND++ +T K   DGT +RCM VA+VAAGKA+ T EK     + PP GY SVVGEV
Sbjct:   28 HVHEAKSRECARSECSRTAFLANTAGLQFCSRACVNEALGETTSTVLNQTLDDETNCGLPGCQQKALPG-GTWRSLRFCSEAHRILFVQRTPVPFGQPSAEPYTTQVVVARDNTSALELRFLDEGHPEHKSLADQFTSKWLHSKPKLGVEVLNVVKIEVPREVRERHEDYKTMVPNVRRRFHGTFSSRICRFYVGG--SMCLRPDCGLCNICMRGFKIEDNVGHSPARGKRRQWLMYGKGLYFSSVSGKANDFSAETEKLATDGTTVRCMLVADVAAGKAFVTTEKYFPQMERPPLGYNSVVGEV 329          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.490e-64
Identity = 103/197 (52.28%), Postives = 140/197 (71.07%), Query Frame = 1
Query:  799 VYSVGSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQ--RSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEV 1383
            V  VGS    L  L+E   E  +LR  F+ +W+KP+PA+G+S+ R++ ++V  E+R+KH++Y     N+ +RFHGTSC++GCNF+VDPQ  ++PCG  SCS+CNI   GFKL  NV  TA A    LRYG+G+Y +SVSGKANDYA ++AK     + LRCMFVA+VA G+A+ TK   L  ++CPPPGY+SVVGEV
Sbjct:    7 VLPVGSSESVLQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEV 203          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.910e-63
Identity = 115/253 (45.45%), Postives = 158/253 (62.45%), Query Frame = 1
Query:  649 SVCKLRYCSVRTLHHLQTGEDLEYCSERHRLLSKPPSKGQLRSSEPYVHGVY---SVGSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVR-IFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEVRVWT 1395
            S CKL+ CS        TG + +YCS  H+  +    +G +R+   +V  V+   + G+  F L  L ++H +  SL +QF +KWVK     G+  VR I  V+VPA++  K+  Y ++  NIRRRFHGTSCS GCNF VD + +PC  R C++CNI   GF L  NVG TA   +  LRYG+G+YFSSVSGK+NDYA  + K   DG ++RCMF+ANV AG AY T++ +L  + CPP G++SVVGE  + T
Sbjct:   24 SECKLKGCSKNVYRDPVTGLESDYCSRGHQAHAIALGQG-MRTVTSHVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVK----GGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSLGQNMCPPAGHDSVVGEAPIET 271          
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Match: D8LKU9_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU9_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 4.260e-62
Identity = 112/194 (57.73%), Postives = 134/194 (69.07%), Query Frame = 1
Query:  808 VGSPRFNLCALDEAHPECPSLRNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFHGTSCSDGCNFIVDPQ--RSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFKLRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTKEKALDDDKCPPPGYESVVGEV 1383
            VGS    L  LD +  +  +L + F T+W+KPQPA G+SVVRIF ++    V          V N+R+RFHGTSC+ GCNF++DPQ   +PCGL SCS+CNI M GF L +NV RTA A  F LRYG GVY SSVSGKANDYA ++AKT  DGT LRCMFVANVA GKA++TK   L    CPP GY+SVVGEV
Sbjct:  327 VGSSSSTLRMLDNSDWQYENLCDMFHTRWLKPQPARGVSVVRIFSIQYKRNV----------VVNLRQRFHGTSCNAGCNFMIDPQGATAPCGLSSCSVCNICMLGFNLGKNVARTARATRFPLRYGPGVYLSSVSGKANDYAGRSAKTGSDGTELRCMFVANVAVGKAFNTKSSNLPQSACPPLGYQSVVGEV 510          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig732.18484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS88_ECTSI1.440e-26092.87PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS87_ECTSI2.800e-12250.23PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS86_ECTSI1.660e-7635.76PARP catalytic domain-containing protein n=2 Tax=E... [more]
D8LSB5_ECTSI3.260e-7046.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKU5_ECTSI4.330e-6961.73TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K349_9PHAE1.130e-6654.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS85_ECTSI1.870e-6544.26PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JBF5_9PHAE1.490e-6452.28PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU6_ECTSI2.910e-6345.45PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU9_ECTSI4.260e-6257.73PARP catalytic domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig732contigEcto-sp13_S_contig732:2611..8889 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score723.8
Seed ortholog evalue4.8e-206
Seed eggNOG ortholog2880.D8LS88
Model size1629
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs28J37@1,2S14A@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-12_004420.1
Cds size1293
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig732.18484.1prot_Ecto-sp13_S_contig732.18484.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig732 2827..8769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464000.1139224-UTR-Ecto-sp13_S_contig732:2610..28261681464000.1139224-UTR-Ecto-sp13_S_contig732:2610..2826Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig732 2611..2826 -
1681464000.2426918-UTR-Ecto-sp13_S_contig732:8769..88891681464000.2426918-UTR-Ecto-sp13_S_contig732:8769..8889Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig732 8770..8889 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464000.128466-CDS-Ecto-sp13_S_contig732:2826..29941681464000.128466-CDS-Ecto-sp13_S_contig732:2826..2994Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 2827..2994 -
1681464000.1437666-CDS-Ecto-sp13_S_contig732:3219..33991681464000.1437666-CDS-Ecto-sp13_S_contig732:3219..3399Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 3220..3399 -
1681464000.1539025-CDS-Ecto-sp13_S_contig732:3937..40541681464000.1539025-CDS-Ecto-sp13_S_contig732:3937..4054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 3938..4054 -
1681464000.1632855-CDS-Ecto-sp13_S_contig732:4283..44691681464000.1632855-CDS-Ecto-sp13_S_contig732:4283..4469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 4284..4469 -
1681464000.2069035-CDS-Ecto-sp13_S_contig732:4780..49851681464000.2069035-CDS-Ecto-sp13_S_contig732:4780..4985Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 4781..4985 -
1681464000.2165725-CDS-Ecto-sp13_S_contig732:5696..57701681464000.2165725-CDS-Ecto-sp13_S_contig732:5696..5770Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 5697..5770 -
1681464000.2253306-CDS-Ecto-sp13_S_contig732:6434..66321681464000.2253306-CDS-Ecto-sp13_S_contig732:6434..6632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 6435..6632 -
1681464000.2339869-CDS-Ecto-sp13_S_contig732:8604..87691681464000.2339869-CDS-Ecto-sp13_S_contig732:8604..8769Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 8605..8769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig732.18484.1

>prot_Ecto-sp13_S_contig732.18484.1 ID=prot_Ecto-sp13_S_contig732.18484.1|Name=mRNA_Ecto-sp13_S_contig732.18484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp
MAGRPAPGSCDIPECKRPRHRRAGTVHNFCGRTHAMEAVSRGLAAKLDRP
HGGCNVCQLRDCSEPVFFDSDTGRVYDFCCRRHANKAMDRGEWVPSPHRG
TSVCNLPGCKELVYRDSTTKADSEYCGKSHFLTGQARLCARRGCTSTAWL
ANTDSRQYCSAYCFSKERVVLNKHAGSVCKLRYCSVRTLHHLQTGEDLEY
CSERHRLLSKPPSKGQLRSSEPYVHGVYSVGSPRFNLCALDEAHPECPSL
RNQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARSVRNIRRRFH
GTSCSDGCNFIVDPQRSPCGLRSCSLCNIGMRGFKLDENVGRTALARNFK
LRYGKGVYFSSVSGKANDYADQTAKTTKDGTRLRCMFVANVAAGKAYSTK
EKALDDDKCPPPGYESVVGEVRVWTEINRV*
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mRNA from alignment at Ecto-sp13_S_contig732:2611..8889-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig732.18484.1 ID=mRNA_Ecto-sp13_S_contig732.18484.1|Name=mRNA_Ecto-sp13_S_contig732.18484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6279bp|location=Sequence derived from alignment at Ecto-sp13_S_contig732:2611..8889- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCTCACAGCACCAGTGTCGTTTTACTCCAACCCGTGCATTACACTACA GCAGTTGTTGTACTGGCTTCACCTTCGACAGTGGCAGATAAGCAAGCAAG ACTAGACTAGCTAGGCAGCCATGGCGGGGCGACCGGCACCCGGGTCGTGC GACATCCCTGAGTGCAAGAGGCCACGGCATCGAAGGGCGGGTACCGTCCA TAACTTCTGCGGGCGGACCCACGCCATGGAGGCTGTCTCAAGGGGGCTAG CAGCGAAACTTGACCGCCCCCACGGCGGGTGCAACGTGAGACGCTTGTTG AGGTCCCTTCTCTCACGCTGAAGCGCTCACTTTAGATGTACCGCTCACCC TAGAGTCCTATGCTTAGCAGGTCCTACTCCGCCTTCAACATAACACTTGC ATCTCGAACAGCAGGCAGGCAGTTTGCTGAAGTCCGAACACTTGCGGCTG GTTGCTGTAGTCCTCTCGGGGGACATGTTCCATGATTTTGTGATGTTCGT AGTGTCTGTAGTCTATGTACTGCTGTGCAGCGGTCCATGTAGACTATGCA TACACAATACGCATGAATACTGTGAAACACCAAGCGCCGTGGTAAGCGTG CGTGCGTCTGCCCGCGTCCCATCCCTTCTGTGGCCAGTCTCTGCACCATT TCGTTCTGGTATGCATACAAACAGATTACAGGCAAGGGTTGAGACTTCTT GTTGAGACTATGCTATTTATATGTACATGTAGTCTAGTACGGGTCGTGCA AGAGTTTTTTTTTGAGCAGTGGCCAAAATGGGGTTCACCCGGTCCAAACA CGGCCATTATCTGGTGCCCCTACAAGATGCTGCTGGAAGCGACCTCATGA CACCGTCTGATTGGCCGACGCCCGACCCTCTACCCGACTTTGACCGCTTC CACCGGGTTACCCGATCTTGGCTACTCACCCTCCGGAGGAGTACACGGTT TTTCTTTCCCCTATCCGAAAATCGCGGGGCTGTTCGGTGAAAACCCACAT GCACACAATCACGGGTAGGACGTACACCACTAGCCGCTCGTTTGTGACCA ATGAGACAGCAGCAGGAGCAGATAGTATTTCTTTGTGTTAGATGCGTCTC GTATGTGTCGCATCTCGTGAGTGAGGCATTGATCTACAGCTCTTTTCGAT CATTTGCACCGACCGCCTGCCTGATGCCGTTTCCCCCAAGCGAGAGTTCT ACCGCCGGCGGTGGGCCGCCCCCGCCCGCCTTCAGAACGTCCGAATTCGA GGGCAAGGCATTCATTGCTGACTGACGTGTACTTGTGTGCATGGGGTTGG GCCGAACAGCCCAGCCATTTTCGGGTAGGGTAAAGAAGAATCGGGTACTC CTCTGGGGCCCTCTGTGGGGGCGAGTAGCCAAGATCGGGTGCATCCGGTG GCAAGATGGTCAAAGTCGGATAGGGGTGGTCGTCGGCCAATCAGATCGTG TCATGCGGTCGTTTCCAGCAGCGTCTTGTAGGAGTACCGGATTATGGCCG TGTTAAGACCGGGTGTATCCGATTTTGGCCACTTCTCTTTTGTTTTTCTT CGAAGCAACTTCACACTGTCTTGTTGGCATCCATTTTTTTGATTTGATGT ATGCATATGCATAGATAGTCCATGCATACTTCAGGATTGTGTGCGTACAT CTTTTTTCAACATTCTTTAAGAGTTTTCTCGTCTTTTTTCGGCGCGTGTC CTCCCGCAATGCGTTCCTGATAGTAGTTGTATTGCGAGAAGAAGGGGTGC ACGCAAGCAGTAGCCGTTCTTTTCCCTCATCGACCGTGAAGTCGACATGT GCGTTTACTCACCATTTGTCTTTCAAACCTTCCCCCCCCCCCCACACAAA AAAAACACCACACCACACATTGTCTAGGCTAGGCTCAACTCTTTAGACTA GACTACAATATACATGAGACAACAGTGTGTCTCATAATCGTTCGTAGTGT AGTAATTGTTTTTCCCACCGCGAGTTGCAAATTTTCTCCACGAAACCCCA GAGAGAGCATCGAATCCGAACCTGCCACACAAAAGTAGGTTACGAGGGTA ACCACACGCGGTTAACCACTGCTAGAAATGGTTCAGGGGGCCTACAAACC GATACCGATGTTTGTGGGGCCGCACAACAAATATCCAGACCACTGCTGTA AATACACACAAGTGTTGTAACGATCGGGCGCCTGGCTAAACTACATAGGT TTGCAAGACTAATGCACATTCCGACCATTCTCTCTCCCGTACCTGTGCGA TGAACAGGTCTGCCAGCTGCGGGACTGCTCGGAGCCTGTCTTTTTCGATT CTGATACCGGACGGGTGTACGACTTCTGCTGCAGACGCCATGCAAACAAG GCGATGGACAGGGGAGAGTGGGTCCCTTCCCCTCACAGAGGGACGTCCGT GTGCAACCTACCTGGCTGCAAGGAGCTGGTCTACCGGGACAGCACCACCA AGGCGGTACGGAACCTCACCCATACTCTCTTGTACACACCGACGCCGAGG GACGCGGTTCGAAGATGGCATTTTCGAGTCATATGTTCCGCCCAAACTTC CATCACGAAATTGCTTTTGTTTTGTTGTGGTTTTGTGGCGGTGGCGTTGC CCGGGAATAACACGATGACCAACCCCACCGCTCGTTTGGCAAGCGTGTGG ACATTTTGGGGTCTCGAAGACTCTCCTGTCAACCTAAGATGCCCGTGCCT CCACAAAGCAGGCTTTGTATTGCCGCCTGTTGCCTTTCTTGTAACCCGTT ACTCTCTCGTGAGACATATTTTACCGTGTATTTCCTACCAATATACGTCC AGTGCGAGACAAGCGTTTGTGGAGGGAACGCTACGAATGTTAGCGCATAG TTTTTTATTATCCTTGAAGGGTAGTTTTCTTCCATGGCATTTCGCGCACG TTTATCGCTGGTGCGATTGCCGTGAACGTTCCCGTCAGGCCACGGCATTT CAGCCAAGATTCATGCCCCTCGTGTGATGTCGACACATTGAATACTTGAT CTTCACTTGGCGGAACTGAAATCCTCGTTATGTTGGAACGCGGAAGCCTC CGTTGATTAGGAAGGGCCGAAGCGAAGATGACAACAGTTTCATCAAACCC TACCCATGGTGCTCTTCAGGACTCCGAGTACTGCGGCAAGTCCCACTTCT TGACAGGTCAAGCGCGACTGTGTGCGCGCCGTGGATGTACGAGGTAAGGA TGGCTAACTCTGTTACATTTATCCCTCCTGCTCGAAGGCGCACCACGGGT ATTAGGCAAAGGTTAAACGCCAGGTACTGGGAAAATGTATTTACGATTGC CTGACGATCTTCCCCGCCGTGCCGAGTAGTACCCGAAGACACCCTTGTGC GGCAAGCGCATCACACCCTAGTGCCTTGCGCATACATGCTTTGACGCTTC GCTAAGTGGTGGCCACGTTGGTCAACTTGGCGTCGAGAGAAGCCCATCGA TGTGTCGTTTACGGATCCATGGATCGCTGCGCTTCTTTCCATTGCCTATG CTTGAGTCGAATACTCTTGATGTCTTGTCCTCCTACTGTCGTGTTGTATT TTCTGCTTCGGCGGAAAGGCTAACCGAAAGCAGTTCCAAAGACTCAGAGA GCGTCTCGCATGTCGCCTACCAAAACAAATATTTAGAACACCAAGTTCCC GAAGCCACAAAAGGGCAGGGAAGCATGAGGAAGAGAGTCCCAACTTACTG TATTAAGCATATGGTCTCATTTGTAGTTCGAGCCACGAACAATATGCACT GTAGGAATGCCCTGAACACCTTACTGTTTAAGAATGTGGAACGTTGCTTG CACGATGAGAGGAAATCTTGATGGAAGGTGCTTGTCAATCGCTCACATAC TCCCCTCGGCTCGCCGGCAATCTGCCTGCGAAATCTTCCGTCATTACTCG ATAGCACCGCGTGGCTCGCGAACACGGACTCCAGACAGTACTGCAGCGCC TACTGCTTCTCCAAGGAACGTGTAGTGCTCAACAAGCATGCCGGCTCGGT TTGCAAGCTCCGCTACTGCTCTGTGCGCACCTTGCACCACCTGCAGACTG GGGAGGACCTGGAATATTGCTCAGAACGTCACCGCCTTCTCTCGAAACCA CCTTCGAAGGTGAGGACATTTTGTGCACAAAGTGCGGCTTGGAGCATTTT CTAGCGAGTGCGCTAAGCCTCCCGAACGGCTGTTTCGAAAGAATCAGGAC AAACAGGGGTCATGGTGTTGAAGGGGTTTGTCGACAGCCCACTTCCTTAA CCCCCGATTATCCATGCGATGATGAGCACGAAATTGTCGGCGGTTGAACG TAGGCTCCTGGCACCTGACCGTTGTCCAATAAGGCCCTCTGCCACTTTTT CCCGCCATGTCTCATTGCCCTCACCCTCCCATATGATCTGCATGGTCGGC GACGTGTCACCACTTCTCAGGGCCAGCTCCGGAGCTCAGAGCCGTACGTG CACGGCGTGTATTCCGTGGGGAGCCCCAGGTTCAACTTATGCGCCCTGGA TGAGGCCCACCCCGAGTGTCCGTCGTTGCGCAACCAGTTCAGCACAAAGT GGGTCAAACCGCAGCCAGCGGAAGGCATCTCGGTCGTGCGGATCTTCAGG GTGGAGGTAAGACGCACCCGTTTGGCATACACAGCGGACGAGCGATGTGC TGTCGTGTTCACGGTGTTCGAAAATCAGTAAGTTTTGCGCGTGATCAATG GTGCTTTTGGTGCTGACGAAGTTAGCGGTGTGTCTGCGCGCAAAGTGATC CATGCCACCCTCCTCTTCACGAAATATATGGCACATTGCATCCGATGCGG ATTTACGTCGTATGTACTCCGTCGTCGCCTGGAAGGTGCCAGCGGAGGTT CGCGACAAGCACGACAAGTACGCGCGCTCGGTGCGAAACATCCGCCGGCG TTTCCATGGCACCTCCTGTAGTGATGGGTGCAATTTTATCGTCGACCCGC AGGTACAGTATTTGGAATAGGTTGGCTGTGTTTTCGGCGCGCTTGGTCCC ATACCGCTTTGACATTTCCCTCAGAACAGCTCTCACCGGATAATTGGGTT TTAGGGTTGTGCACGGCGTACTATTTTTATTCTTGGCGGTACCCCCGCCA CTGGTGCTTTACACAGTTGGAGCAGCATTCTCTACTTCGTGCGCTACCTC AACCGATGTAGCTAGTATGTCCAGGTCACACCTCCAACGATGCGTTTAAC CTTGCTCGAAACGAATCTGCCGTCAATGTTGCCGACTATGCGCTACATGT ACCCGTCATGGGCTTCGTTCATCGTCGTCGCCTTATTTCGCCTTCGGGCA ATCACCGAATTTCCTTGCAGGTTTGACGGTGCCCATACACTGATGCCTTG CGTTGCATTGGCAGACTTTTCGAGTGGGTTTGACCGCCCTCTGCCGTCTT TCTTGCGCCTCAGGTTGGGGTTATTGTCCCCTCTGTCGGTTGACTTCGTT TCTGATATCGCTTGTTTTTGCCGCAACTCCGGCGGTGCAGAGATCCCCTT GCGGACTGCGCAGTTGCAGCTTGTGCAACATTGGCATGCGGGGCTTCAAG CTCGACGAAAACGTCGGCCGCACTGCGCTGGCGCGTAACTTCAAGCTGCG CTATGGCAAGGGCGTGTACTTCAGCAGCGTGTCCGGGAAGGCCAATGACT ACGCCGACCAAACTGCAAAGGTAGATTTCTGGTAGAGGACCGACCCATCG ACAGTTCCGTACGTCCGACGCGCAGACGTTTCACTCGGAAGTTGAAAGCT TCCTGTACATGATGCTCATATATGCCAATGACAAGATCGTTTTGGGTCTG ATACTCGCGAACTGCCTGGAGTAACAATGTGCTGGTCTTGACTTGTTGCT TCCGCGTACACTCGCACGGGCGATGTACGAACGGTCCGCCTGCAGACGAC CAAGGACGGCACGAGGCTGAGGTGCATGTTCGTCGCAAACGTCGCGGCGG GAAAGGCATACTCCACCAAGGAGAAAGCTTTGGACGACGACAAATGCCCG CCTCCAGGCTACGAATCCGTCGTCGGGGAGGTGAGGGTATGGACAGAGAT AAACCGCGTGTGAGACCATCGGGTTTGATGTTCTATTAATAGCAGTTGAC TTCGTCCACCTTCCACACGAACGACATCGTTTTGGCGTGAAGTCCGCTAA GATGAAAAGCACCGCCGAGGACCGGACCATTGGCAGCGATAGCGGCTGTA ACGAAGGGCATAGCGCAACGTAAGGTGAAATCAGTTGTTTCGCTCTCCTC GCTCATCCTTGTCCCCGACAGGTAGGCGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig732:2611..8889-

>mRNA_Ecto-sp13_S_contig732.18484.1 ID=mRNA_Ecto-sp13_S_contig732.18484.1|Name=mRNA_Ecto-sp13_S_contig732.18484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig732:2611..8889- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGGGCGACCGGCACCCGGGTCGTGCGACATCCCTGAGTGCAAGAG
GCCACGGCATCGAAGGGCGGGTACCGTCCATAACTTCTGCGGGCGGACCC
ACGCCATGGAGGCTGTCTCAAGGGGGCTAGCAGCGAAACTTGACCGCCCC
CACGGCGGGTGCAACGTCTGCCAGCTGCGGGACTGCTCGGAGCCTGTCTT
TTTCGATTCTGATACCGGACGGGTGTACGACTTCTGCTGCAGACGCCATG
CAAACAAGGCGATGGACAGGGGAGAGTGGGTCCCTTCCCCTCACAGAGGG
ACGTCCGTGTGCAACCTACCTGGCTGCAAGGAGCTGGTCTACCGGGACAG
CACCACCAAGGCGGACTCCGAGTACTGCGGCAAGTCCCACTTCTTGACAG
GTCAAGCGCGACTGTGTGCGCGCCGTGGATGTACGAGCACCGCGTGGCTC
GCGAACACGGACTCCAGACAGTACTGCAGCGCCTACTGCTTCTCCAAGGA
ACGTGTAGTGCTCAACAAGCATGCCGGCTCGGTTTGCAAGCTCCGCTACT
GCTCTGTGCGCACCTTGCACCACCTGCAGACTGGGGAGGACCTGGAATAT
TGCTCAGAACGTCACCGCCTTCTCTCGAAACCACCTTCGAAGGGCCAGCT
CCGGAGCTCAGAGCCGTACGTGCACGGCGTGTATTCCGTGGGGAGCCCCA
GGTTCAACTTATGCGCCCTGGATGAGGCCCACCCCGAGTGTCCGTCGTTG
CGCAACCAGTTCAGCACAAAGTGGGTCAAACCGCAGCCAGCGGAAGGCAT
CTCGGTCGTGCGGATCTTCAGGGTGGAGGTGCCAGCGGAGGTTCGCGACA
AGCACGACAAGTACGCGCGCTCGGTGCGAAACATCCGCCGGCGTTTCCAT
GGCACCTCCTGTAGTGATGGGTGCAATTTTATCGTCGACCCGCAGAGATC
CCCTTGCGGACTGCGCAGTTGCAGCTTGTGCAACATTGGCATGCGGGGCT
TCAAGCTCGACGAAAACGTCGGCCGCACTGCGCTGGCGCGTAACTTCAAG
CTGCGCTATGGCAAGGGCGTGTACTTCAGCAGCGTGTCCGGGAAGGCCAA
TGACTACGCCGACCAAACTGCAAAGACGACCAAGGACGGCACGAGGCTGA
GGTGCATGTTCGTCGCAAACGTCGCGGCGGGAAAGGCATACTCCACCAAG
GAGAAAGCTTTGGACGACGACAAATGCCCGCCTCCAGGCTACGAATCCGT
CGTCGGGGAGGTGAGGGTATGGACAGAGATAAACCGCGTGTGA
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