prot_Ecto-sp13_S_contig7307.18469.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7307.18469.1
Unique Nameprot_Ecto-sp13_S_contig7307.18469.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length682
Homology
BLAST of mRNA_Ecto-sp13_S_contig7307.18469.1 vs. uniprot
Match: D7G6U0_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U0_ECTSI)

HSP 1 Score: 1143 bits (2957), Expect = 0.000e+0
Identity = 583/627 (92.98%), Postives = 599/627 (95.53%), Query Frame = 0
Query:    1 QVSSFNESWTVCLCSYAATVGAVGDGTGSNQASRKIEKVDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRFDQKDRGRPAGCGAWLASLTCWSKGPAPTTDNQGKAGNERRASTPHMPRRGMTRDECLKSLAAAVQGDNKDGVGATAPHHLGERRVRKSLKLLIMVHHDFVSVFYCFYEWFTRPKRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVAGVGSSCAWDEGSRTCYLPEPEDDMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTKGDRAETGDMEAERGGKAPNGKSGGNAIASSKTVDHVDTDATSDFEARLTIEVNLARAAEHRREGKMTRFWRSLCCGCGFCGDGAKREARLEKKVKRSLGPAISLEKRIAQTGDVDSKEALLFEQAEADSLNYLERQVFFNSRILNYGEEDSLSGVPLCVKWLAWLFIVVYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFLEDIFLLVPLKLAFVYLFLPSLMRHRMRSDMFTRIPRHATSVQVARRHPNMEVSGLILQGRIPHGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAMV 627
            QVSSFN+SWT+CLCSYAATVG VGDGTGSNQ       VDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWR DQKDRGRPAGCGAWLASL CWSK P  TTDNQGK  NERRAST H+P+RGMTRDECLKSLAAAVQGDNKD V ATAPHHLGERRVRKSLKLLIMVHHDFVSVFYC+YEWFTRP+RVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNV GVGSSCAWDEGSRTCYLPEPE+DMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTKG RA TGDMEAERGGKAPNGKSGG+AIASSKTVDHV+ DAT DF+ARLTIEV+LARAAEHRREGK+TRFWRSLCCGCGFCGDGAKREARLEKKVKRSLGPAISLEKRIAQTGDVDSKEALLFEQAEADSL YLERQVFFNSRIL YG+EDSLSGVPLC+K LAWLFIVVYAVGLSFYVCLFAVKAGRATSVQWMISFWVAF EDIFLLVPLKLAFVYLFLPSLMRHRMRSDMF RIPRHATSVQVARRHPNMEVSG+ILQGRIPHGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAM+
Sbjct: 1283 QVSSFNDSWTICLCSYAATVGVVGDGTGSNQ-------VDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRLDQKDRGRPAGCGAWLASLACWSKAPPSTTDNQGKTVNERRASTLHVPKRGMTRDECLKSLAAAVQGDNKDDVDATAPHHLGERRVRKSLKLLIMVHHDFVSVFYCYYEWFTRPQRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVGGVGSSCAWDEGSRTCYLPEPEEDMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTKGGRAGTGDMEAERGGKAPNGKSGGSAIASSKTVDHVEKDATGDFKARLTIEVDLARAAEHRREGKVTRFWRSLCCGCGFCGDGAKREARLEKKVKRSLGPAISLEKRIAQTGDVDSKEALLFEQAEADSLTYLERQVFFNSRILTYGDEDSLSGVPLCIKCLAWLFIVVYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFFEDIFLLVPLKLAFVYLFLPSLMRHRMRSDMFKRIPRHATSVQVARRHPNMEVSGMILQGRIPHGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAMI 1902          
BLAST of mRNA_Ecto-sp13_S_contig7307.18469.1 vs. uniprot
Match: A0A6H5JDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC0_9PHAE)

HSP 1 Score: 927 bits (2395), Expect = 1.970e-314
Identity = 488/589 (82.85%), Postives = 504/589 (85.57%), Query Frame = 0
Query:   38 KVDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRFDQKDRGRPAGCGAWLASLTCWSKGPAPTTDNQGKAGNERRASTPHMPRRGMTRDECLKSLAAAVQGDNKDGVGATAPHHLGERRVRKSLKLLIMVHHDFVSVFYCFYEWFTRPKRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVAGVGSSCAWDEGSRTCYLPEPEDDMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTKGDRAETGDMEAERGGKAPNGKSGGNAIASSKTVDHVDTDATSDFEARLTIEVNLARAAEHRREGKMTRFWRSLCCGCGFCGDGAKREARLEKKVKRSLGPAISLEKRIAQTGDVDSKEALLFEQAEADSLNYLERQVFFNSRILNYGEEDSLSGVPLCVKWLAWLFIVVYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFLEDIFLLVPLKLAFVYLFLPSLMRHRMRSDMFTRIPRHATSVQVARRHPNMEVSGLILQGRIPHGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAM 626
            +VDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWR DQKDRGRPAGCGAWLASL CWSK P PTTDNQGKA NERRAST  +P+RGMTRDECLKSLAAAV+GDNKD V ATAPHHLGERRVRKSLKLLIM+HHDFVSVFYCFYEWFTRP+RVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVAGVGSSCAWDEGSRTCYLPEPE+DMETSLVISTISLILALPLELFLVAVFAAFLVRPTKT GDRA TGDMEAER                       +  A +   ARLTIEV+LARAAEHRREGKMTRFWRSLCCGCGFCGDGAKREARL+KKVKRSLG AI+LEK+IAQTGDVDSKEALLFEQAEADSLNYLERQVFFNSRILNYGEEDS SGVPLC+K LAWLFIV+YAVGLSFYVCLFAVKAGRATSVQWMISFWVAF E                                         VARRHPNMEVSGLILQGRIP+GNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAM
Sbjct: 1291 QVDFASTFLDTAGEFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRLDQKDRGRPAGCGAWLASLACWSKAPPPTTDNQGKALNERRASTLRVPKRGMTRDECLKSLAAAVRGDNKDNVDATAPHHLGERRVRKSLKLLIMIHHDFVSVFYCFYEWFTRPQRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAASSTANVNVAGVGSSCAWDEGSRTCYLPEPEEDMETSLVISTISLILALPLELFLVAVFAAFLVRPTKTNGDRAGTGDMEAER------------------WELREELVAVTLLGARLTIEVDLARAAEHRREGKMTRFWRSLCCGCGFCGDGAKREARLQKKVKRSLGAAITLEKKIAQTGDVDSKEALLFEQAEADSLNYLERQVFFNSRILNYGEEDSQSGVPLCIKCLAWLFIVMYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFAE-----------------------------------------VARRHPNMEVSGLILQGRIPNGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAM 1820          
BLAST of mRNA_Ecto-sp13_S_contig7307.18469.1 vs. uniprot
Match: A0A7S2UY02_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY02_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.590e-9
Identity = 45/158 (28.48%), Postives = 87/158 (55.06%), Query Frame = 0
Query:  436 KEALLFEQAEADSLNYLERQVFFNSRILNYGEEDSL--SGVPLCV-KWL---AWLFIVVYAVGLSFYVCLFAVKAGRATSVQWMISFWVAFLEDIFLLVPLKLAFVYLFLPSLMRHRMRSDMFTRIPRHATSVQVARRHPNMEVSGLILQGRIPHGNE 587
            ++A+L + A  +  N+LE+ V    R+ + G  D    S  PL   KW+    W+ +++  +  ++Y CLF +  G   S  W+ +F++A +ED+ +LVP++   + L +P ++   +  D F  +P ++ SVQ++RR+P++  S  I + R   G +
Sbjct:  114 QDAVLIKSAVDEYTNFLEQLVL--KRLESVGANDGREESDFPLAPNKWMRPVGWVAMLLLILACTYYTCLFGITKGTILSDMWVQAFFMALVEDLVVLVPVRTLILDLCIPFMVHKDVEHDRFRSLPSYSVSVQLSRRYPHLRSSQWIEKSRTKMGKQ 269          
BLAST of mRNA_Ecto-sp13_S_contig7307.18469.1 vs. uniprot
Match: F0Y8X7_AURAN (REJ domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8X7_AURAN)

HSP 1 Score: 58.5 bits (140), Expect = 4.830e-5
Identity = 76/281 (27.05%), Postives = 129/281 (45.91%), Query Frame = 0
Query:  384 KMTRFWRSLCCGCGFCGDGAKREARLEKKVKRSLGPAISLEKR-IAQTGDV--DSKEALLFEQAEADSLNYLERQVFFNSRILNYGEEDSLSGVPLCVKWLAWLFIVVYAVGLSF--YVCLFAVK----AGRATSVQWMISFWVAFLEDIFLLVPLKLAFVYLFLPSLMRHRMRSDMFTRIP---------RHATSVQVARRHPNMEVSGLILQGRIPHGNEFEKFIPLFTARSRWYTCMTGLVFTVLAIIMLLPDTLQAMVLDVLIAVMVGGGVFALAKL 646
            K T  WR L         G   + R  +K +RS+   +    R +A+   +  D +  LL E A  + L+ LE++++  +R  +  +E +   +P   +    L +V++   ++F  Y  L A +    + +ATS +W+    +A + DIFL  P  +AF  ++LPSL+R R+RS    R P         R   +  VA +  ++ ++ L+L  +    +E         A  R      G+   V A ++LLP+ LQ +V+D LI      GV AL  L
Sbjct: 1568 KYTVTWRRLFYR------GETDDERFARKTRRSVRRDLQRADRYLAEFEGLNDDEQSKLLGEYARLEQLSPLEQRIYLKNRAEDVLDEHAAEDLPPATRAGRALALVLFIAAVAFPLYYVLVAFQHIAASSKATSREWLKGVSLAVVCDIFLYSPAHVAFFNVYLPSLLRTRLRSLADLRGPSDFEFATPLREGAAAHVAAQKKHLPLAALVLAAQPKPASE----ATAAAAPRR----NAGVAVAVWAAVLLLPELLQDLVVDELIV----AGVSALMVL 1830          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7307.18469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6U0_ECTSI0.000e+092.98REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JDC0_9PHAE1.970e-31482.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UY02_9STRA6.590e-928.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y8X7_AURAN4.830e-527.05REJ domain-containing protein n=1 Tax=Aureococcus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 514..539
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 503..513
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..313
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 625..647
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 540..600
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 620..624
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 601..619
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 314..479
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 480..502
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 648..682
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..286
NoneNo IPR availableTMHMMTMhelixcoord: 210..232
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 480..502
NoneNo IPR availableTMHMMTMhelixcoord: 630..652
NoneNo IPR availableTMHMMTMhelixcoord: 601..620
NoneNo IPR availableTMHMMTMhelixcoord: 517..539
NoneNo IPR availableTMHMMTMhelixcoord: 291..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7307contigEcto-sp13_S_contig7307:2..7047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7307.18469.1mRNA_Ecto-sp13_S_contig7307.18469.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7307 2..7048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7307.18469.1 ID=prot_Ecto-sp13_S_contig7307.18469.1|Name=mRNA_Ecto-sp13_S_contig7307.18469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=682bp
QVSSFNESWTVCLCSYAATVGAVGDGTGSNQASRKIEKVDFASTFLDTAG
EFISIWDEATTLTWTEVQSAAPIFATMGGILALAVISAGFGWRFDQKDRG
RPAGCGAWLASLTCWSKGPAPTTDNQGKAGNERRASTPHMPRRGMTRDEC
LKSLAAAVQGDNKDGVGATAPHHLGERRVRKSLKLLIMVHHDFVSVFYCF
YEWFTRPKRVALLLCSVVTLMATEATVFASIMFKDDGTCGAFENLADCAA
SSTANVNVAGVGSSCAWDEGSRTCYLPEPEDDMETSLVISTISLILALPL
ELFLVAVFAAFLVRPTKTKGDRAETGDMEAERGGKAPNGKSGGNAIASSK
TVDHVDTDATSDFEARLTIEVNLARAAEHRREGKMTRFWRSLCCGCGFCG
DGAKREARLEKKVKRSLGPAISLEKRIAQTGDVDSKEALLFEQAEADSLN
YLERQVFFNSRILNYGEEDSLSGVPLCVKWLAWLFIVVYAVGLSFYVCLF
AVKAGRATSVQWMISFWVAFLEDIFLLVPLKLAFVYLFLPSLMRHRMRSD
MFTRIPRHATSVQVARRHPNMEVSGLILQGRIPHGNEFEKFIPLFTARSR
WYTCMTGLVFTVLAIIMLLPDTLQAMVLDVLIAVMVGGGVFALAKLFPLS
FWGCEKRASPKADTPAETERSAESTFWLEAGL
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