prot_Ecto-sp13_S_contig7306.18467.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7306.18467.1
Unique Nameprot_Ecto-sp13_S_contig7306.18467.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length258
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7306.18467.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 7.140e-61
Identity = 176/193 (91.19%), Postives = 178/193 (92.23%), Query Frame = 0 
Query:   64 QNSYIRRRSSSYGDPNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTPHRKTAKSPSPAFYSPVRQAPANHAKLSGGTHKKYVKVGGPTTVASRSFMQQHAEAXXXXXXXXXXRASSNSGSPPRAMSATSGSQAGSDEKDRSVNSDEALGVVDEEGLGLGGRRDREKKQFGT 256
            QNSYIRRRSSS GDP+SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         SV PHRKTAKSPSPAFYSPVRQAPANHAKLSGGTHKKYVKVGGPTTVASR FMQQHAE XXXXXXXXXX  SSNSGSPPRAMSATSGSQAGSDEKDRSVNSD+ALGVVDEEGLGLGGRRDREKKQFGT
Sbjct: 1738 QNSYIRRRSSSSGDPHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTPSSGSV-SVAPHRKTAKSPSPAFYSPVRQAPANHAKLSGGTHKKYVKVGGPTTVASRLFMQQHAEXXXXXXXXXXXXXSSNSGSPPRAMSATSGSQAGSDEKDRSVNSDDALGVVDEEGLGLGGRRDREKKQFGT 1929
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BLAST of mRNA_Ecto-sp13_S_contig7306.18467.1 vs. uniprot
Match: D8LNZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ6_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 5.430e-46
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0 
Query:  150 QAPANHAKLSGGTHKKYVKVGGPTTVASRSFMQQHAEAXXXXXXXXXXRASSNSGSPPRAMSATSGSQAGSDEKDRSVNSDEALGVVDEEGLGLGGRRDREKKQFGTR 257
            QAPANHAKLSGGTHKKYVKVGGPTTVASRSFMQQHAEAXXXXXXXXXX ASSNSGSPPRAMSATSGSQAGSDEKDRSVNSDEALGVVDEE LGLGGRRDREKKQ GTR
Sbjct:  728 QAPANHAKLSGGTHKKYVKVGGPTTVASRSFMQQHAEAXXXXXXXXXXXASSNSGSPPRAMSATSGSQAGSDEKDRSVNSDEALGVVDEEALGLGGRRDREKKQLGTR 835
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7306.18467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW93_9PHAE7.140e-6191.19Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D8LNZ6_ECTSI5.430e-4697.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7306contigEcto-sp13_S_contig7306:1243..3049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7306.18467.1mRNA_Ecto-sp13_S_contig7306.18467.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7306 1243..3049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7306.18467.1 ID=prot_Ecto-sp13_S_contig7306.18467.1|Name=mRNA_Ecto-sp13_S_contig7306.18467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp
GAAGALLSRGTAYTLPPLQFFFLPLVRHAPPWAGGDPAGAPTYPRSCGWR
GRGPRVEKRIVGPQNSYIRRRSSSYGDPNSSSQSHSHGHGHGHASSITTP
PRSRTTSTTTPATTPTSTPTPTPSSGSVSVTPHRKTAKSPSPAFYSPVRQ
APANHAKLSGGTHKKYVKVGGPTTVASRSFMQQHAEAAAAAAAVETSRAS
SNSGSPPRAMSATSGSQAGSDEKDRSVNSDEALGVVDEEGLGLGGRRDRE
KKQFGTR*
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