mRNA_Ecto-sp13_S_contig7281.18434.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7281.18434.1
Unique NamemRNA_Ecto-sp13_S_contig7281.18434.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: D7FKB4_ECTSI (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB4_ECTSI)

HSP 1 Score: 1007 bits (2603), Expect = 0.000e+0
Identity = 636/718 (88.58%), Postives = 647/718 (90.11%), Query Frame = 2 
Query:  146 MCKAGQSKDDGGILSRMRQLQGDMPAGEGEGASGAAGAKEDEGNGAGALPP-----VLRLLSADVLTEACTLLDPRSLATAAAACRSFRDVCQGAYPWRGLCCREWELSDAAEEEEGAAVSSAPAVPVPRSRLHFRDSILGCDFRKLFPLIEQMPSGFDCSLLRDGSPANGANNADGVDAQEPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPEEAEEKAGEFVIRGVRRRPAKRPLSPGVAAAAAPAWASTATEXXXXXXXXXXXXS----GDVALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAGARSSLARHLETSPLALFRWLLAKMASTASGGAXXXXXXXXXXXXXXSPALAVHPGQVGDHHFQHDAQQQQAGGGAFAAPGAMLQAGLGQDAAASTGERRRRASSLPSGGPDGAIAPGGGQHGEKLKLPRVLCFPVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHPIPDCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGTFYPTVGVDSACPVRINLGGEPFRFDLAAALREGGQEATARESVAQHEPKRSRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPGRSRQQSLPLPDVLPPPAEGSSISGANPHVALSY 2272
            MCKAGQ K DGGILSRMRQLQGDMPA EGEGASG AGAKEDEG+GA ALPP     VLRLLSADVLTEACTLLDPRSLATAAAACRSFRDVCQGAYPWRGLCCREWELSDA EEEEG   +SAPAV VPRSRLHFRDSILGCDFRKLFPLIEQMP+GFDCSLLR GSPA+GANNADG DAQEPD               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +APEEAEEKAG+FVIRGVRRRPAKRPLSPGVAA            XXXXXXXXXXXX     GDVALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAGARSSLARHLETSPLALFRWLLAKMA+TASGGAXXXXXXXXXXXXXX    AVHPG VGDH FQH+AQQQQAGG AFAAPGAMLQAGLGQD AA+TGERRRRASSLPSGGPDGA A GGGQHGEK KLPRVLCFPVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHPIPDCIAVGVSESRFPLKGKMPGWDSRS+GYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGTFYPTVGVDSACPVRINLG EPFR DLAAALREGGQEATARESVAQHEPKRSRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    RSRQ+SLPLPDVLPPPAEGSSISG NPHVALSY
Sbjct:    1 MCKAGQGKADGGILSRMRQLQGDMPADEGEGASGVAGAKEDEGDGAAALPPPLLPPVLRLLSADVLTEACTLLDPRSLATAAAACRSFRDVCQGAYPWRGLCCREWELSDATEEEEGXXXASAPAVQVPRSRLHFRDSILGCDFRKLFPLIEQMPTGFDCSLLRGGSPASGANNADGADAQEPDDDNHQQEANNHEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----RAPEEAEEKAGDFVIRGVRRRPAKRPLSPGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAGARSSLARHLETSPLALFRWLLAKMAATASGGAXXXXXXXXXXXXXXXXXSAVHPGLVGDHQFQHNAQQQQAGGVAFAAPGAMLQAGLGQDGAAATGERRRRASSLPSGGPDGAGASGGGQHGEKPKLPRVLCFPVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHPIPDCIAVGVSESRFPLKGKMPGWDSRSYGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGTFYPTVGVDSACPVRINLGEEPFRLDLAAALREGGQEATARESVAQHEPKRSRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRQRSLPLPDVLPPPAEGSSISGVNPHVALSY 714
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.230e-54
Identity = 156/333 (46.85%), Postives = 179/333 (53.75%), Query Frame = 2 
Query: 1019 ALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAGARSSLARH-LETSPLALFRWLLAKMASTASGGAXXXXXXXXXXXXXXSPALAVHPGQVGDHHFQHDAQQQQAGGGAFAAPGAMLQAGLGQDAAASTGERRRRASSLPSGGPDGAIAPGGGQHGEKLKLPRVLCFPVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHP-IPDCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDA-ADIFFTLNGELLNGGSAAFRGVR-GTFYPTVGVDSACPVRINLGGE-PFRFDLAAALRE 2002
            AL VE+ GG+G+GNRCVR D P PS  + ER    ARS  ARH     PLAL   LL                             AVH G  G H              A A PGA   A L    A + G     A++ P                    LP     P+    G VD + R+VSYFEV+I APR  A    +P+CIA+G+SE +F L+GKMPGWDS S+GYHSDDGGAFH+AGSMLF+ GP+FG GDVVGCGLDYS GG   ADIFFTLNG  L     AF GVR G  YPTVG+DSA PVRINLGG  PF F + A  RE
Sbjct: 1158 ALLVEYTGGVGLGNRCVRTDAPFPSPRIWERRSLAARS--ARHGAAAGPLALMYKLLR----------------------------AVHAG--GSHS-------------AAATPGAAS-AALALLGATTCGASVHAAATTP--------------------LP--FSTPIWTAPGTVDASARVVSYFEVSI-APRTGARGAGVPECIAIGLSEEQFTLQGKMPGWDSCSYGYHSDDGGAFHNAGSMLFRYGPTFGRGDVVGCGLDYSHGGGVCADIFFTLNGRYLG---VAFAGVRAGGLYPTVGIDSAAPVRINLGGAAPFAFGVGAFERE 1418
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A7S1GNI7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNI7_CYCTE)

HSP 1 Score: 139 bits (351), Expect = 7.310e-32
Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 2 
Query: 1544 VVDVTPRLVSYFEVTIIAPRLDAPHP---------IPDCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGV-----RGTFYPTVGVDSACPVRINLGGEPFRFDLAAAL 1996
            VVDV+PRLVSYFE+TI+      P+          + DC+A+GVS   F  + +MPGWDSRS+GYH DDGG FH +G M  + GP+FG GD VGCG+D+   G    IFF LNG+ L     A+ G+     R   YPT+GVD+  P+  N G   F FDL++ +
Sbjct:  267 VVDVSPRLVSYFEITILEDTPAFPNQPVVTPMDPQVADCVAIGVSTQEFSCQSRMPGWDSRSYGYHGDDGGIFHASGEMKRRFGPAFGKGDTVGCGVDHRNAG----IFFCLNGKFLG---YAWTGLESFVARQELYPTIGVDTNHPIDANFGTRKFAFDLSSFI 424
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A7S2JZ83_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ83_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.820e-31
Identity = 75/163 (46.01%), Postives = 101/163 (61.96%), Query Frame = 2 
Query: 1523 PVALGRGVVDVTPRLVSYFEVTIIAPRLD-----APHPIPDCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGT--FYPTVGVDSACPVRINLGGEPFRFDLAA 1990
            P  +  G ++ TPRLV Y+EVT++ P  +     +P    +C+AVG+S S FP   KMPGWDS S+GYHSDDGG FH  G ML   GP F +GD VGCG+DY+  G    IF+TLNG  L     A+ G+  T  +Y  +GVD+   ++IN G  P++F+L A
Sbjct:  267 PYVMKNGQLNCTPRLVVYYEVTLVPPTRNQSQAASPRRTTECVAVGLSTSNFPHYAKMPGWDSFSYGYHSDDGGIFHAQGDMLRHYGPQFSSGDTVGCGIDYANHG----IFYTLNGRFLG---YAWLGIDTTMKYYACIGVDTDLALKINFGQYPYQFNLQA 422
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A7S2Y3N2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3N2_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.540e-31
Identity = 90/226 (39.82%), Postives = 119/226 (52.65%), Query Frame = 2 
Query: 1451 PDGAIAPGGGQHGEKLKLPRVLCFPVALGRG--VVDVTPRLVSYFEVTIIAPRLDA------------PHPIPDCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGT------------FYPTVGVDSACPVRINLG-GEPFRFDLAAALREGGQEATARESVAQHE 2047
            P GA       H E    P V+ F V+  +    + VTPRLV YFEV I+ P  +             P    DC+AVG+S ++F L  +M GWDS S+GYH DDGG FH  G ML + GP+FG GDVVGCG+DY        +FFTLNG  L     AF  +               +YPTVG+D+ C V+ N G  +PF+FDL   +RE  ++A  +E + Q +
Sbjct:   37 PKGAEEKEDSSHIELQWKPFVVPFCVSHNQEELTMSVTPRLVHYFEVNILPPPQEGETRPSTLHDAAVPRFSSDCVAVGISTNQFSLHTRMVGWDSYSYGYHGDDGGVFHCNGHMLREYGPTFGVGDVVGCGVDYHRNA----VFFTLNGRYLGD---AFTNLEEENRESGNVFYEQDWYPTVGIDTKCLVQCNFGTDQPFQFDLEKYMRE--KQADVQEHIQQEQ 253
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A7S1YBN1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBN1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.160e-30
Identity = 84/198 (42.42%), Postives = 104/198 (52.53%), Query Frame = 2 
Query: 1523 PVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHPIP--------------------------DCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGV-RGTFYPTVGVDSACPVRINLGG-EPFRFDLAAALREGGQEATARES 2032
            P    R    +TPRLVSY+EV+I+          P                          DC+AVG+S + F   G+MPGWD  S+GYH DDGG FH  G ML + G SFG GDVVGCG+DYS  G    IFFTLNG+ L  G    + + R   YPTVG+D+ CPV  N G  EPF FDL A  +   + A  R++
Sbjct:  368 PYVNARSKTILTPRLVSYYEVSILEKPTTVDDTEPPALVRARIMNDNXXXXXXXXXXRTAYDCVAVGLSTANFSTHGRMPGWDHLSWGYHGDDGGLFHGCGDMLQRFGASFGQGDVVGCGVDYSNNG----IFFTLNGKFLGYGWVNLQELSRLELYPTVGIDTNCPVHTNFGTTEPFEFDLEAFAKTRSEFAATRDA 561
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A7S2MZU7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZU7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 8.370e-30
Identity = 63/121 (52.07%), Postives = 79/121 (65.29%), Query Frame = 2 
Query: 1628 DCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRG--VRGTFYPTVGVDSACPVRINLGGEPFRFDL 1984
            DC+A+G+S + F  + KMPGWD +S+GYH DDGG FHD G M+   GP+FG  D VGCG+DYS    +  IFFT NGE L    A      + G  YPTVGVD+ CP+ IN G +PF F+L
Sbjct:  115 DCVAIGLSTASFATQRKMPGWDEQSYGYHGDDGGIFHDGGEMIRTFGPTFGVYDTVGCGIDYS----SKSIFFTRNGEFLGFAFAELDDSVLEGGLYPTVGVDTNCPLFINFGEKPFEFNL 231
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BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A1Z5JW83_FISSO (B30.2/SPRY domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW83_FISSO)

HSP 1 Score: 133 bits (335), Expect = 1.210e-29
Identity = 76/170 (44.71%), Postives = 96/170 (56.47%), Query Frame = 2 
Query: 1547 VDVTPRLVSYFEVTIIAPRLDAPHPIP-----------------DCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGG--SAAFRGVRGTFYPTVGVDSACPVRINLG-GEPFRFDLAAAL 1996
            V +TPRL+SYFEV+I +PR D P  IP                 DCI +GV   +F    +M GWD +SFGYHSDDGG +H+ G M+ K GP+FG GD VGCG+DY        IFFTLNG  L       + + +    YP VG+D+ CPV  N G  E F FDL + +
Sbjct:  274 VHLTPRLISYFEVSIESPREDVPA-IPFRFTNHLNGPLRPRSEGDCIVIGVGTRKFHFSNRMAGWDDQSFGYHSDDGGVYHNQGQMIRKFGPTFGVGDTVGCGVDYQ----RRAIFFTLNGNFLGYAFERLSLKILEQDLYPVVGLDTHCPVACNFGCDEGFLFDLKSMV 438
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A1Z5JU35_FISSO (B30.2/SPRY domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU35_FISSO)

HSP 1 Score: 133 bits (335), Expect = 1.240e-29
Identity = 76/170 (44.71%), Postives = 96/170 (56.47%), Query Frame = 2 
Query: 1547 VDVTPRLVSYFEVTIIAPRLDAPHPIP-----------------DCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGG--SAAFRGVRGTFYPTVGVDSACPVRINLGGEP-FRFDLAAAL 1996
            V +TPRL+SYFEV+I +P+LD P  IP                 DCI +GV   +F    +M GWD +SFGYHSDDGG +H+ G M+ K GP+FG  D VGCG+DY        IFFTLNG  L       + + +    YP VG+D+ CPV  N G E  F FDL A +
Sbjct:  276 VHLTPRLISYFEVSIESPQLDVPE-IPLRFANHWNGPRRPRLEGDCIVIGVGTRKFHFSNRMAGWDDQSFGYHSDDGGVYHNQGQMIRKFGPTFGVRDTVGCGVDYQ----RRAIFFTLNGNFLGYAFEKLSLKILEQDLYPVVGLDTHCPVACNFGCEEGFLFDLKAMV 440
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Match: A0A7S0PIR2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIR2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.630e-29
Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 2 
Query: 1547 VDVTPRLVSYFEVTIIAPR----------LDAPHPIPDCIAVGVSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGV--RGTFYPTVGVDSACPVRINLGGEPFRFDLAA 1990
            ++VTPRLV+Y+EVTI   R          +     + DC+AVG++  RF  K KMPGWD+ S+GYH DDGG FH  G M+ + GP FG GD VGCG++++  G    IFFTLNG  L     A+ GV  +  FY +VGVDS  P+  N G  PF+FDL +
Sbjct:  289 INVTPRLVAYYEVTIHEKRSEDGALGTNIISEEENLIDCVAVGIATDRFNEKHKMPGWDNFSYGYHGDDGGIFHARGDMVKQYGPKFGVGDTVGCGINFANNG----IFFTLNGIFLG---YAWLGVCTQRPFYASVGVDSNFPISANFGRIPFKFDLTS 441
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7281.18434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKB4_ECTSI0.000e+088.58B30.2/SPRY domain-containing protein n=2 Tax=Ectoc... [more]
A0A835ZEA9_9STRA5.230e-5446.85B30.2/SPRY domain-containing protein n=1 Tax=Tribo... [more]
A0A7S1GNI7_CYCTE7.310e-3246.06Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2JZ83_9STRA1.820e-3146.01Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2Y3N2_9STRA2.540e-3139.82Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1YBN1_9STRA1.160e-3042.42Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2MZU7_9STRA8.370e-3052.07Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JW83_FISSO1.210e-2944.71B30.2/SPRY domain-containing protein n=1 Tax=Fistu... [more]
A0A1Z5JU35_FISSO1.240e-2944.71B30.2/SPRY domain-containing protein n=1 Tax=Fistu... [more]
A0A7S0PIR2_9STRA1.630e-2946.88Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7281contigEcto-sp13_S_contig7281:852..7530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1016.9
Seed ortholog evalue4.5e-294
Seed eggNOG ortholog2880.D7FKB4
Model size2275
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGsKOG1477@1,KOG1477@2759
Ec32 ortholog descriptionSPRY domain
Ec32 orthologEc-05_005570.1
Cds size2130
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7281.18434.1prot_Ecto-sp13_S_contig7281.18434.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7281 852..7010 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463996.1265676-CDS-Ecto-sp13_S_contig7281:851..10971681463996.1265676-CDS-Ecto-sp13_S_contig7281:851..1097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7281 852..1097 -
1681463996.1481721-CDS-Ecto-sp13_S_contig7281:1464..17321681463996.1481721-CDS-Ecto-sp13_S_contig7281:1464..1732Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7281 1465..1732 -
1681463996.161163-CDS-Ecto-sp13_S_contig7281:2202..23811681463996.161163-CDS-Ecto-sp13_S_contig7281:2202..2381Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7281 2203..2381 -
1681463996.1772063-CDS-Ecto-sp13_S_contig7281:2711..38001681463996.1772063-CDS-Ecto-sp13_S_contig7281:2711..3800Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7281 2712..3800 -
1681463996.189607-CDS-Ecto-sp13_S_contig7281:4279..45361681463996.189607-CDS-Ecto-sp13_S_contig7281:4279..4536Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7281 4280..4536 -
1681463996.2000995-CDS-Ecto-sp13_S_contig7281:6919..70101681463996.2000995-CDS-Ecto-sp13_S_contig7281:6919..7010Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7281 6920..7010 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463996.2108002-UTR-Ecto-sp13_S_contig7281:7010..70751681463996.2108002-UTR-Ecto-sp13_S_contig7281:7010..7075Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7281 7011..7075 -
1681463996.2213762-UTR-Ecto-sp13_S_contig7281:7450..75301681463996.2213762-UTR-Ecto-sp13_S_contig7281:7450..7530Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7281 7451..7530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7281.18434.1

>prot_Ecto-sp13_S_contig7281.18434.1 ID=prot_Ecto-sp13_S_contig7281.18434.1|Name=mRNA_Ecto-sp13_S_contig7281.18434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=710bp
MCKAGQSKDDGGILSRMRQLQGDMPAGEGEGASGAAGAKEDEGNGAGALP
PVLRLLSADVLTEACTLLDPRSLATAAAACRSFRDVCQGAYPWRGLCCRE
WELSDAAEEEEGAAVSSAPAVPVPRSRLHFRDSILGCDFRKLFPLIEQMP
SGFDCSLLRDGSPANGANNADGVDAQEPDDDNHQEEADNHDGAAAAAAAA
AAEGDGEDDGDAAINQGAAAPAAAGGGVAAQAPEEAEEKAGEFVIRGVRR
RPAKRPLSPGVAAAAAPAWASTATEEGQRPRSSSSSSSGDVALQVEFRGG
LGVGNRCVRADLPLPSTVLRERTGAGARSSLARHLETSPLALFRWLLAKM
ASTASGGAGAGGGSGAGRASPASPALAVHPGQVGDHHFQHDAQQQQAGGG
AFAAPGAMLQAGLGQDAAASTGERRRRASSLPSGGPDGAIAPGGGQHGEK
LKLPRVLCFPVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHPIPDCIAVG
VSESRFPLKGKMPGWDSRSFGYHSDDGGAFHDAGSMLFKCGPSFGAGDVV
GCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGTFYPTVGVDSACPV
RINLGGEPFRFDLAAALREGGQEATARESVAQHEPKRSRTAAAAASAPAA
GEAAPSMPAGAKAAAGASSPSPSFPGRSRQQSLPLPDVLPPPAEGSSISG
ANPHVALSY*
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mRNA from alignment at Ecto-sp13_S_contig7281:852..7530-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7281.18434.1 ID=mRNA_Ecto-sp13_S_contig7281.18434.1|Name=mRNA_Ecto-sp13_S_contig7281.18434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7281:852..7530- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGATCGAGAGACTGGGGAAGACAAAGGCTAACGGGACGCTGAGGTCCAA
GGCGACACACGCGTAACCGAGGCGCAAGAGGCAGGTAAGGGTAAGAGCAC
AAGATCCAAAAGATCTTGTTGTCTCCGCGAGTTTTCATGTGGGGGGGCTT
GCGTCATGTGGCGGAGCCCCCTTGTCCGGTTGGATTGAAATGGTTTTAAA
AGTACATACGCCGAGACACACAATCCTGCCTCTCATACCAGCCACCACCT
CTCTCTTCTATAGCCACTCTGCTTCGTTCTCACGGGACTGCATGAGCACG
ACTTGAGTACGAGAATAGAGATCAGGGCTACGTCCACGTGGTACGGAGCA
CGAGAAAGTAGTAGAGTTCAAACTACAGCAGACTGCTGTACTGCTGTACA
AGGATTGAAGCAAACGAAGAACACCCCGCTTTTTCGAACACCACACCACC
GACAGCTTTCTGGCAGCAGCAACAGCAGCAGCCGCAGTTGAACTGCGCAG
CGACAACAACCAACAAGGCCATGTGCAAGGCCGGCCAAAGTAAGGACGAC
GGCGGGATACTCTCGCGGATGCGCCAGCTCCAAGGAGACATGCCTGCTGG
CGAAGGCGAAGGTGAGGCAGAAACCCGCTAACAAAATAGAGGTTGTTTGT
ATGCTGTCTTCCTCTTCATCTTGAAGTTGATTCGTCTGGCCTGGTCTTCT
AGACGCCCCTGCTCAATGATGTCGTTGGCGGTAGCACCATTAGGGCAGCA
CCATTAGTAGGGCTCGCTTGTGTCGCGCGTGTCTGAACCACGGAGCGAAA
TCGATGTCACGGGTATGGTACTACCAGGCGCCCCCGTCGCGCGTGGTCGT
CGGCCCCTTCCCGTGTGCCTGGACAACATCGGCGCTCTCTGTGGATCATG
CGTGTTGGGGTGTGGTACAGAAGTTTCCCGCAGGGTCAACTTCGGCTCCT
CTCAATTGTACAACACGCGTCTTCTACTTGGTGCTGCTGTATCGCGTCTT
TGCCCAGACACTCGAGAGGAAGTAGTGGCAGCGACGACTGTGATGCTGCT
GCGTTGCGCCTTATGTAGAAGACACGCCCGCCCCCCCCCATCGGTGATCG
GGAGCATTGCAGCATTGCGCCCGAAAAAGACCAGAAAAGAGTGACACGGC
GAAGAGGCAAAATATTTTGTCCGCTTGCTGTTCGACCTGCTGTTTGCTGC
GGCAGGTTTTGGTCACCGCATGAACGAACATTATTCAACTACCGTCTGGA
CAGATAGACTCCTACGGGTTTGCCGCGACGCCCTCCCCTTTCTCAAACGA
AGCGATGGAGTATTTGTCGGAATATACACATTGATGTTTGGTTCCATGTC
TCGCTCCCCCGATATATGTATGCCTTGAGGTTTCGAGTTTGGCTGGTGGT
GGTTGCACTTCAACACCAGATCCAAACTATGAATGCACATCGTGCCTACA
CATGACACGCCTTCCAACACATCCCGTTTACTGCTACTGTGGGTACATCT
CGAACGGGTATTCTTTCACTCGATAATATGAAGATTCGTTGAAACACTAT
TTTGTCCTCCCAGTTACTAAAAATGGCGGGTTCAACGGAACTCGGCGTGT
GTGGATCTAGAAAGACCTGTTTGTGCCTGGCATAACGATCAGCGGACTTA
GATGGCGTTATTACGTTACTACGCTTCTCGAAAATCCGCTCAACACGAAT
TGCTTTTGGAATTTTAGACCATAACGACCTCGTTCCGTTTTTTTTTGTTT
GGTTGTCGATGCAAATCCGCGCTTACGGCGTCTGTGCCGTCTACTGCAAC
CCGTGATCACGCAGAACTCCGAAAATGGCCAGGTGTTGTCGGCCTTACTC
GTCCTGTAAGTTGTTTGTTTGTGCGTGTGCCTATTGATCAGATCATGGAA
TTTGAAAGGCGTGGTGCATGTAGTATCTCTCAAGCGAAACTCAACCACCC
ACAGCTACCTGAAGAGCCAGTGTGGGACCAGTCAGGTTTTGGTGGGCACG
ACGGTTGTGCATCAAGAGCGTTACAGTATAGCACAATGTCGCGGTATGTT
CGGCTTTCCGGTAGTGTTGTTGTTGTTGTTACATAAACAAATGACTAACA
ATAAACGTTCCGATCTCGTACACACGGCGGTACTGTGCATGTAGGACCCG
ATGCCCTGGTGAGCCACGACAACGGGTGGGGTGCGTCGACGGTTGACCGC
CCCCAGTCACGCGGCCTGTATGACGTTGTTTGCCACTATAGCGGTGGAGG
TCCCGATATTGTGACCGGACGATTTCGTCGGCACTACAGTGGGCAACCGG
CACTATATCGGTACCTCGGCTGCACTACGCGCTCGCTCTCGCTACCATGC
GAGCGGCCACGCCACAGGACGTTTGCATACTTCGTAGGGAACGAGCCTCT
GGAAAATTGTCGCAAGCTACGCCTCTGCAAATGGTGTTGCGTCGGGTCGG
TCAACACTGCAATAGACCCACACCGCCGTCCGCACTGAACAGAGGACTCG
CTGTTCATGTGTCGAGAAGTGCTGAAGAGAACCACCACCATCCTAACCCG
AAAGTATGGACAGACAAGAAATCATGGCGCTAAGAAGCAGCGCCGCACAC
GCGCCATCTTTGTGTGCGTTACCTACACCCCACGTCTGCTATACAGTACG
CGAGACGACAACAGCGACCGAATCGCAACTTTTCCACCGCGCCGAATAGC
ACAGTCACCCTAGACTCATTGTCGTCTGAAGAGGTGTTGCGTTGTTGTGC
AAAAAATCGATTGAATTGTCTGCACGCAGGTTCATTTTATGTATTAAAGC
ATTTTGGATGATGACGTATAGAACCGGCTACGTTGGGGGTTCAGGGTTAG
GGTTAGAGTGTGCGTGCTCCATGCCTGGGCTCTTGTAGTATCCCAACTTC
CTTTGCGTAGGCAGTCTCGACGATATATATTCAAAGGCCTCCGAACAACA
ACCGACGGCCGACTGATTCTCCCCGCCCCCCCCACCCCCGCCAGGCGCAA
GCGGTGCCGCCGGCGCGAAAGAAGACGAGGGGAATGGGGCCGGGGCCCTA
CCGCCGGTCCTCCGGCTCCTCTCAGCCGACGTGCTGACAGAGGCGTGCAC
GCTTCTCGACCCCCGCTCCCTCGCGACGGCGGCGGCGGCGTGCCGGTCGT
TCCGCGACGTGTGCCAGGGGGCGTACCCGTGGAGGGGACTGTGTTGTCGG
GAGTGGGAGCTGTCGGACGCCGCGGAGGAGGAAGAGGGAGCGGCGGTGAG
TGTGGTCGCGTTGATACGATTGCGGCGTCCGGGGAGCACATAAGGCTGGT
TTGGAAGGGCGCGCGCGGTTGCTGAGGCCCGTATGTGTATGCAGCGGGAC
AAGGATTTTTTTTTGGGGGGGGGGCGGCAGAGGCTACTGCGTTAAGCAGC
ACTCAATACGACCTTTTCTTCCATCCAGACACGCCTGACGGGTCCGGTGA
ACATTGCTGCGTAGTACGCGGCCAAAAATTACCCTCTTGGGTGGGAGAGT
GGACTACACCTTGAAGTACAGCATAACCCAGTGCCAATGCGCGTGGTTCT
TTGATCTGCATGCATCGAACTCGTGTTGTCGGCGGACGTGTAACATGGCG
TGTCCGCCACATTGGGATGTTTCCTACCTACCATATTGCTTTCGTTTTCT
TCAGCGCGTTCCTCATGTCCAACTTATTCCTGCCGCTCTTGCTCCACCCG
TCTCTTTTTCTTTTTTTTTTGGTCCGTCAGTCGGCGCCAGCAGTGCCAGT
GCCCCGCAGCCGGCTGCACTTTCGGGACTCCATCCTCGGGTGCGACTTCC
GCAAGCTTTTCCCCCTGATCGAGCAGATGCCCTCGGGCTTCGACTGCTCC
TTGCTCCGTGATGGCTCTCCCGCCAACGGTGCAAACAACGCCGACGGTGT
TGATGCCCAAGAACCCGACGACGATAACCACCAGGAAGAGGCGGACAACC
ATGACGGCGCAGCAGCAGCAGCTGCAGCAGCAGCAGCTGAAGGGGACGGT
GAAGATGACGGTGATGCCGCGATCAACCAAGGGGCGGCAGCGCCGGCAGC
AGCAGGTGGCGGCGTGGCGGCGCAGGCTCCCGAGGAAGCAGAAGAGAAGG
CCGGCGAGTTCGTGATCAGGGGGGTCCGGCGGCGTCCGGCGAAGAGGCCT
CTATCTCCGGGCGTAGCAGCAGCAGCAGCTCCGGCGTGGGCCTCAACGGC
AACGGAGGAGGGGCAGCGGCCGCGCTCGTCCTCCTCCTCGTCCTCCGGCG
ACGTGGCCCTGCAGGTGGAGTTCCGCGGGGGGCTTGGCGTCGGGAACCGC
TGCGTGCGGGCCGACCTACCGCTCCCGAGCACGGTGCTGCGGGAGCGAAC
GGGGGCCGGAGCGAGGTCTAGCCTGGCGAGGCACTTGGAGACGTCCCCGC
TGGCCCTGTTCCGCTGGCTGCTGGCCAAGATGGCGTCGACGGCGAGCGGC
GGCGCTGGCGCCGGCGGCGGCTCGGGCGCCGGGCGTGCTTCCCCTGCCTC
TCCCGCTTTGGCTGTACACCCGGGTCAAGTCGGGGACCACCACTTTCAAC
ACGACGCACAGCAGCAGCAGGCGGGAGGGGGGGCATTCGCGGCGCCGGGG
GCGATGCTGCAAGCCGGATTGGGGCAGGACGCGGCCGCGAGCACAGGAGA
GCGCCGGAGGCGTGCTTCCTCGCTGCCCAGCGGGGGGCCGGACGGTGCCA
TCGCTCCTGGCGGGGGTCAGCACGGGGAGAAGCTAAAGCTGCCGCGGGTG
CTGTGCTTCCCGGTTGCGTTGGGGAGAGGCGTCGTGGACGTTACGCCTAG
GCTCGTCAGCTACTTCGAGGTGCCGTCGGTTGTGGGGGAGAAGGAGTTCA
AGAGACGTGGATCTTTGGTTATTTTTTGTATGTGGTGTGCATAGCGAGGG
CTGGCAGAGAGAATCCCGCGATGGGTGTCACACCAGCCGTTCGATTTCAT
AGTATGCGCCCCTGGGAGGCCCGCCGTATGCGATAGCGGCGGCAACGAGG
ACCTCAAGATAAATGTGTGTGCGACAAGATCATGCCTCCCCCAAGCAGAT
AGATATTCCCGGTCCCCACAATCACCGCCGATTCTTGATGTCACGCACAA
TCCTTACTCCGTTCCCTCCCTTGGTATGGAATTATTTTGTTTCACGCAGG
TGACGATCATTGCCCCGCGGCTGGACGCTCCCCACCCCATTCCCGACTGT
ATCGCTGTCGGGGTCAGCGAGAGCCGCTTCCCCCTCAAGGGCAAGATGCC
CGGCTGGGACTCCCGGTCGTTTGGGTACCACAGCGACGACGGCGGGGCGT
TCCACGACGCCGGAAGCATGCTCTTCAAGTGGGTCGTGATTTTCGTTGTT
GCTCGCGTGGGCGTGTGTTTGCGGGTATCGCAGTGCTGATGGGTAGGGTC
ATGTACTGTAGTTCGAAGAACATCGAATGAGCACTGATGTTTTGCCTTTA
GAGGTGGGCGTGTTCGGCACACACAAGTCTACTTTGGGCATGGAGGACCG
GCTAAGAGAGGGGGCCGGGACAAGACAAATATCGTTCTCTTATTCCGATT
TCTCTTACAAACCCGTACTACCATATAGGTTTTCTTCTTTCAAACCGAAC
CATGTTTTTGTGTGCTTTTTCATGCCCGGGACAAGTCTTACTCTCTCTCA
ACTCCGTGTGCATACATATTCCTCATATGTACACAATCTCTATTACTCCT
ACCAGCAGCCACTTCTGTTCTGGTTTCTCACGCCCTCCCCCCGCCCCCCT
TCTACAATGTTTTCTCTGGGATGGGACCCCCGACCCCCGCCGCTGCAGGT
GTGGCCCCTCCTTCGGCGCCGGCGACGTGGTCGGGTGCGGTCTCGACTAC
AGCGTCGGGGGCGACGCAGCCGACATCTTCTTCACGCTCAACGGAGAGCT
GCTGAACGGAGGTTCCGCCGCATTCCGAGGGGTGAGGGGAACCTTCTACC
CCACGGTGGGGGTTGACTCGGCGTGCCCGGTACGGATCAACCTCGGGGGG
GAGCCGTTCAGGTTCGACCTCGCGGCAGCGCTGCGGGAGGGGGGGCAGGA
GGCGACGGCTCGGGAGGTGTGTGGCGTGGCTCGGGTTGCGTTGTCGTGTG
ATGGGGTGTGGCGTGGATGGGGTTGTGTGTGTCGTGTGATGGTTTGGGGG
AGAAGGAGGAAGCAGCTGGGCCGAGAGCGCGGGGGGGGGGTAGGCGAGAG
AACGAGAGAGAGAGAGAGAGATAAGGAGGGAAGCGGAGCACGCAGGTAGA
CATCAGAGCGTAGCTAGCGTTGGCCTGTAGACTTACAACAACGAAATATA
CGCTCACTGAAGTGTGTTAACTGTTTTCCGACCCCATCGCATGAGGCGAA
ACTGACCCCCCTCTCGCCACCCCTCGCCCCGTGATCCGTCCTCCCTACTA
ACGTCAACGGCGACGCTGACACAATAACACCAGTCGGTGGCCCAGCACGA
GCCCAAGCGCAGCCGCACCGCAGCAGCCGCTGCTTCTGCGCCGGCGGCGG
GCGAGGCAGCGCCGTCGATGCCCGCCGGTGCGAAGGCAGCGGCCGGGGCC
TCATCTCCATCGCCGTCGTTCCCGGGGCGTTCGCGGCAGCAGTCGTTGCC
GCTACCGGACGTTCTGCCGCCGCCCGCGGAGGGGAGCTCCATTAGTGGAG
CTAACCCGCACGTGGCGCTGAGCTACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7281:852..7530-

>mRNA_Ecto-sp13_S_contig7281.18434.1 ID=mRNA_Ecto-sp13_S_contig7281.18434.1|Name=mRNA_Ecto-sp13_S_contig7281.18434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2130bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7281:852..7530- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCAAGGCCGGCCAAAGTAAGGACGACGGCGGGATACTCTCGCGGAT
GCGCCAGCTCCAAGGAGACATGCCTGCTGGCGAAGGCGAAGGCGCAAGCG
GTGCCGCCGGCGCGAAAGAAGACGAGGGGAATGGGGCCGGGGCCCTACCG
CCGGTCCTCCGGCTCCTCTCAGCCGACGTGCTGACAGAGGCGTGCACGCT
TCTCGACCCCCGCTCCCTCGCGACGGCGGCGGCGGCGTGCCGGTCGTTCC
GCGACGTGTGCCAGGGGGCGTACCCGTGGAGGGGACTGTGTTGTCGGGAG
TGGGAGCTGTCGGACGCCGCGGAGGAGGAAGAGGGAGCGGCGGTGAGTTC
GGCGCCAGCAGTGCCAGTGCCCCGCAGCCGGCTGCACTTTCGGGACTCCA
TCCTCGGGTGCGACTTCCGCAAGCTTTTCCCCCTGATCGAGCAGATGCCC
TCGGGCTTCGACTGCTCCTTGCTCCGTGATGGCTCTCCCGCCAACGGTGC
AAACAACGCCGACGGTGTTGATGCCCAAGAACCCGACGACGATAACCACC
AGGAAGAGGCGGACAACCATGACGGCGCAGCAGCAGCAGCTGCAGCAGCA
GCAGCTGAAGGGGACGGTGAAGATGACGGTGATGCCGCGATCAACCAAGG
GGCGGCAGCGCCGGCAGCAGCAGGTGGCGGCGTGGCGGCGCAGGCTCCCG
AGGAAGCAGAAGAGAAGGCCGGCGAGTTCGTGATCAGGGGGGTCCGGCGG
CGTCCGGCGAAGAGGCCTCTATCTCCGGGCGTAGCAGCAGCAGCAGCTCC
GGCGTGGGCCTCAACGGCAACGGAGGAGGGGCAGCGGCCGCGCTCGTCCT
CCTCCTCGTCCTCCGGCGACGTGGCCCTGCAGGTGGAGTTCCGCGGGGGG
CTTGGCGTCGGGAACCGCTGCGTGCGGGCCGACCTACCGCTCCCGAGCAC
GGTGCTGCGGGAGCGAACGGGGGCCGGAGCGAGGTCTAGCCTGGCGAGGC
ACTTGGAGACGTCCCCGCTGGCCCTGTTCCGCTGGCTGCTGGCCAAGATG
GCGTCGACGGCGAGCGGCGGCGCTGGCGCCGGCGGCGGCTCGGGCGCCGG
GCGTGCTTCCCCTGCCTCTCCCGCTTTGGCTGTACACCCGGGTCAAGTCG
GGGACCACCACTTTCAACACGACGCACAGCAGCAGCAGGCGGGAGGGGGG
GCATTCGCGGCGCCGGGGGCGATGCTGCAAGCCGGATTGGGGCAGGACGC
GGCCGCGAGCACAGGAGAGCGCCGGAGGCGTGCTTCCTCGCTGCCCAGCG
GGGGGCCGGACGGTGCCATCGCTCCTGGCGGGGGTCAGCACGGGGAGAAG
CTAAAGCTGCCGCGGGTGCTGTGCTTCCCGGTTGCGTTGGGGAGAGGCGT
CGTGGACGTTACGCCTAGGCTCGTCAGCTACTTCGAGGTGACGATCATTG
CCCCGCGGCTGGACGCTCCCCACCCCATTCCCGACTGTATCGCTGTCGGG
GTCAGCGAGAGCCGCTTCCCCCTCAAGGGCAAGATGCCCGGCTGGGACTC
CCGGTCGTTTGGGTACCACAGCGACGACGGCGGGGCGTTCCACGACGCCG
GAAGCATGCTCTTCAAGTGTGGCCCCTCCTTCGGCGCCGGCGACGTGGTC
GGGTGCGGTCTCGACTACAGCGTCGGGGGCGACGCAGCCGACATCTTCTT
CACGCTCAACGGAGAGCTGCTGAACGGAGGTTCCGCCGCATTCCGAGGGG
TGAGGGGAACCTTCTACCCCACGGTGGGGGTTGACTCGGCGTGCCCGGTA
CGGATCAACCTCGGGGGGGAGCCGTTCAGGTTCGACCTCGCGGCAGCGCT
GCGGGAGGGGGGGCAGGAGGCGACGGCTCGGGAGTCGGTGGCCCAGCACG
AGCCCAAGCGCAGCCGCACCGCAGCAGCCGCTGCTTCTGCGCCGGCGGCG
GGCGAGGCAGCGCCGTCGATGCCCGCCGGTGCGAAGGCAGCGGCCGGGGC
CTCATCTCCATCGCCGTCGTTCCCGGGGCGTTCGCGGCAGCAGTCGTTGC
CGCTACCGGACGTTCTGCCGCCGCCCGCGGAGGGGAGCTCCATTAGTGGA
GCTAACCCGCACGTGGCGCTGAGCTACTGA
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