prot_Ecto-sp13_S_contig7278.18430.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7278.18430.1
Unique Nameprot_Ecto-sp13_S_contig7278.18430.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length506
Homology
BLAST of mRNA_Ecto-sp13_S_contig7278.18430.1 vs. uniprot
Match: D8LBM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM8_ECTSI)

HSP 1 Score: 595 bits (1534), Expect = 1.160e-209
Identity = 360/507 (71.01%), Postives = 368/507 (72.58%), Query Frame = 0
Query:    1 MFSFLNLQNFNFDFVGDSIPNSGRTGKKKTSSSNGKRESGKQLWLWESHGSSSSSPTANSTANMTPRTEPVVTPPPKRAPLDCPAARA-ETERAKRRSLSKQSALRNNHNEQRRSSVFFRLPDLDKILKGDHANSSXXXXXXXXXXXXXXGRRASRSANGGKGHHQGVGGGDGDFGHSLAAKLSRPVSGRRRGRRASVAPGGSSPGRTRADRLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHXXXXXXXXXDRSRDQKRPSPRSSPRALSAGHRRESCRDCSVISRAPKGLSATRLLEDAQDVARIRSQAGLRAKMEGVCWIASNWCVGGRKGVLSGKRFLVLCDNIVWAELREADRRCSIAAGSVVSGGG-QGGTTRKRAAGFMPLIALEGATIQHCEVANSNNGWIIEVVNPSENVTLWLDPENATALLRWGSVLCQALQTERYDGVGDE 505
            MFSFLNLQNFNFDFVGDSIPNSGRTGKKKTSSSNGKRESGKQLWLWESHGSSSSSPTANSTANMTPRTEPVVTPPPKRAPLDCPAAR  ETERAKRRSLS+QSA+RNN NE RRSSVFFRLPDLDKILKGD+ANSS    XXX       GRRASRSANGGKGHHQG+GG  GDFGHSLAAKLSRPVSGRRRGRRASVAPGGSSPGRTRADRLAA  XXXXXXXXXXX                                                                                                     RESCRD  VISR PKGLSA RLLEDAQDVARIRSQAGLR+KMEG CWIASNWCVG  KG  S K FL LCDN  WAELR+ADRRCSIAAGS +SGGG QGGTTRK+AAGFMPLIALEGA IQHCEVANSNNGWIIEVVNPSENVTLWLDPENATALLRWGSVLCQALQTERYDG  DE
Sbjct:    1 MFSFLNLQNFNFDFVGDSIPNSGRTGKKKTSSSNGKRESGKQLWLWESHGSSSSSPTANSTANMTPRTEPVVTPPPKRAPLDCPAARRPETERAKRRSLSQQSAVRNNTNEHRRSSVFFRLPDLDKILKGDNANSSSSAEXXXAGRKKD-GRRASRSANGGKGHHQGMGGDGGDFGHSLAAKLSRPVSGRRRGRRASVAPGGSSPGRTRADRLAAAEXXXXXXXXXXXEKST-------------------------------------------------------------------------------------------------RESCRDGRVISRTPKGLSAARLLEDAQDVARIRSQAGLRSKMEGFCWIASNWCVGALKGFFSAKSFLFLCDNFFWAELRKADRRCSIAAGSFLSGGGGQGGTTRKQAAGFMPLIALEGAAIQHCEVANSNNGWIIEVVNPSENVTLWLDPENATALLRWGSVLCQALQTERYDGEEDE 409          
BLAST of mRNA_Ecto-sp13_S_contig7278.18430.1 vs. uniprot
Match: A0A6H5J8D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D2_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 4.160e-98
Identity = 273/328 (83.23%), Postives = 277/328 (84.45%), Query Frame = 0
Query:    1 MFSFLNLQNFNFDFVGDSIPNSGRTGKKKTSSSNGKRESGKQLWLWESHGSSSSSPTANSTANMTPRTEPVVTPPPKRAPLDCPAARAETERAKRRSLSKQSALRNNHNEQRRSSVFFRLPDLDKILKGDHANSSXXXXXXXXXXXXXXGRRASRSANGGKGHHQGVGGGDGDFGHSLAAKLSRPVSGRRRGRRASVAPGGSSPGRTRADRLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHXXXXXXXXXDRSRDQKRPSPRSSPRALSAGHR 328
            MFSFLNLQNFNFDFVGDSI NSGRTGKKKTSSSNGKRESGKQLWLWESHGSSSSSPTANS     PRTEPVVTPPPKRAPLDCPAAR ETERAKRRSLS+QSA+RN       SSVFFRLPDLDKILKGD+ANSS               R ASRS  G KGHHQG+GGGDGDFG SLAAKLSRPVSGRRRGRRASVAPGGSSPGRTR DRLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ALH         DRSRD KRPSPRSSPRALSAGHR
Sbjct:    1 MFSFLNLQNFNFDFVGDSISNSGRTGKKKTSSSNGKRESGKQLWLWESHGSSSSSPTANSXXXXXPRTEPVVTPPPKRAPLDCPAARPETERAKRRSLSQQSAVRNXXXXXXXSSVFFRLPDLDKILKGDNANSSSSAEAVAGGSKKDV-RSASRSVTGSKGHHQGMGGGDGDFGQSLAAKLSRPVSGRRRGRRASVAPGGSSPGRTREDRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGD-ALHQKQQQKG--DRSRDHKRPSPRSSPRALSAGHR 324          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7278.18430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBM8_ECTSI1.160e-20971.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8D2_9PHAE4.160e-9883.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7278contigEcto-sp13_S_contig7278:810..4709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7278.18430.1mRNA_Ecto-sp13_S_contig7278.18430.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7278 2..5174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7278.18430.1 ID=prot_Ecto-sp13_S_contig7278.18430.1|Name=mRNA_Ecto-sp13_S_contig7278.18430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=506bp
MFSFLNLQNFNFDFVGDSIPNSGRTGKKKTSSSNGKRESGKQLWLWESHG
SSSSSPTANSTANMTPRTEPVVTPPPKRAPLDCPAARAETERAKRRSLSK
QSALRNNHNEQRRSSVFFRLPDLDKILKGDHANSSSSAEAAAAAGRKKDG
RRASRSANGGKGHHQGVGGGDGDFGHSLAAKLSRPVSGRRRGRRASVAPG
GSSPGRTRADRLAAAEEETRNAAAAAAERSTCVLGNEESQEEGSAGTSPA
AAAAAGGDGGPPFFESKRGSLLLTVGEEEEVLAPAAAAAAEGDALHQKQQ
QQQQDDRSRDQKRPSPRSSPRALSAGHRRESCRDCSVISRAPKGLSATRL
LEDAQDVARIRSQAGLRAKMEGVCWIASNWCVGGRKGVLSGKRFLVLCDN
IVWAELREADRRCSIAAGSVVSGGGQGGTTRKRAAGFMPLIALEGATIQH
CEVANSNNGWIIEVVNPSENVTLWLDPENATALLRWGSVLCQALQTERYD
GVGDE*
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