mRNA_Ecto-sp13_S_contig72759.18426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig72759.18426.1
Unique NamemRNA_Ecto-sp13_S_contig72759.18426.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: A0A6H5K4T4_9PHAE (Pseudo-AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T4_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.270e-26
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 
Query:    1 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRRTQKAV 156
            STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVR  QKAV
Sbjct:   79 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRHKQKAV 130
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: D8LHM0_ECTSI (Aryl sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.740e-25
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 
Query:    1 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRRTQKAV 156
            STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVR  QKAV
Sbjct:  139 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRHKQKAV 190
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: D7G187_ECTSI (Aryl sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G187_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 3.230e-20
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 1 
Query:    1 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRRTQKAV 156
            S P RRFFKSH+NLKQLPVG+AKG+KVIYVARNPKDVSVSL+HHVR  Q+ V
Sbjct:  147 SNPERRFFKSHANLKQLPVGTAKGVKVIYVARNPKDVSVSLYHHVRNKQRDV 198
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: D8LJX5_ECTSI (Aryl sulfotransferase, C-terminal Aryl sulfotransferase, N-terminal n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJX5_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 4.510e-17
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 1 
Query:    1 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVR 138
            STP+RRF K+H+NLK LP GSAKGLKVIYVARNPKDV VSL+HHV+
Sbjct:  148 STPDRRFMKTHANLKNLPAGSAKGLKVIYVARNPKDVCVSLYHHVK 193
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: D7G0M1_ECTSI (Aryl sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 4.530e-17
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1 
Query:    1 STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVR 138
            STPNRRF KSH+NL  LPVGSA GLKVIYVARNPKDV VSL+HH++
Sbjct:  100 STPNRRFMKSHANLTDLPVGSAMGLKVIYVARNPKDVVVSLYHHIK 145
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: A0A6H5K098_9PHAE (AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K098_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 4.530e-11
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:   10 NRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHH 132
            ++RFFK+H+NLK LP G A G+KVIYV RNPKDV VSL HH
Sbjct:  130 DKRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHH 170
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: A0A7S2XZC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.070e-8
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:   16 RFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVR 138
            RFFK+H+NL  LP G A   KVIYVARNPKDV VSLFHH +
Sbjct:  150 RFFKTHANLGDLPKGQASP-KVIYVARNPKDVVVSLFHHAK 189
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: A0A6S9GU12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GU12_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 2.020e-8
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 1 
Query:    4 TPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVR 138
            T   R+FK+H+NL+ LP  S+   KVIYVARNPKDV VSL HH +
Sbjct:  145 TEGPRYFKTHANLQDLPGRSSANPKVIYVARNPKDVVVSLLHHAK 189
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: A0A6V1XC27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XC27_HETAK)

HSP 1 Score: 57.4 bits (137), Expect = 2.660e-8
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 1 
Query:   16 RFFKSHSNLKQLPVGSAK--GLKVIYVARNPKDVSVSLFHHVR 138
            RFFKSH+ L  LP G A   GLKV+YVARNPKD  VSL+HH +
Sbjct:  127 RFFKSHATLANLPRGRAPAPGLKVLYVARNPKDTVVSLYHHAK 169
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BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Match: F0YEU1_AURAN (Sulfotransfer_1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEU1_AURAN)

HSP 1 Score: 57.0 bits (136), Expect = 3.060e-8
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:   16 RFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHH 132
            RFFKSH+    LP G A G+KVI +ARNPKD  VSLFHH
Sbjct:   79 RFFKSHATFGDLPRGKAPGVKVIAIARNPKDTVVSLFHH 117
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72759.18426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4T4_9PHAE2.270e-2696.15Pseudo-AST protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D8LHM0_ECTSI6.740e-2596.15Aryl sulfotransferase n=1 Tax=Ectocarpus siliculos... [more]
D7G187_ECTSI3.230e-2080.77Aryl sulfotransferase n=2 Tax=Ectocarpus TaxID=287... [more]
D8LJX5_ECTSI4.510e-1780.43Aryl sulfotransferase, C-terminal Aryl sulfotransf... [more]
D7G0M1_ECTSI4.530e-1780.43Aryl sulfotransferase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K098_9PHAE4.530e-1170.73AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2XZC3_9STRA1.070e-870.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9GU12_HETAK2.020e-860.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1XC27_HETAK2.660e-865.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YEU1_AURAN3.060e-866.67Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig72759contigEcto-sp13_S_contig72759:221..641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score102.8
Seed ortholog evalue4.8e-20
Seed eggNOG ortholog2880.D8LHM0
Model size156
KEGG koko:K01025
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
EggNOG free text desc.sulfotransferase activity
EggNOG OGsKOG1584@1,KOG1584@2759
Cds size156
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463995.5315256-CDS-Ecto-sp13_S_contig72759:220..2981681463995.5315256-CDS-Ecto-sp13_S_contig72759:220..298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig72759 221..298 +
1681463995.5455248-CDS-Ecto-sp13_S_contig72759:563..6411681463995.5455248-CDS-Ecto-sp13_S_contig72759:563..641Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig72759 564..641 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig72759.18426.1prot_Ecto-sp13_S_contig72759.18426.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig72759 221..641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig72759.18426.1

>prot_Ecto-sp13_S_contig72759.18426.1 ID=prot_Ecto-sp13_S_contig72759.18426.1|Name=mRNA_Ecto-sp13_S_contig72759.18426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
STPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRRTQK
AV
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mRNA from alignment at Ecto-sp13_S_contig72759:221..641+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig72759.18426.1 ID=mRNA_Ecto-sp13_S_contig72759.18426.1|Name=mRNA_Ecto-sp13_S_contig72759.18426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=421bp|location=Sequence derived from alignment at Ecto-sp13_S_contig72759:221..641+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCGACACCCAACAGGCGGTTCTTCAAGTCGCACTCTAACCTCAAGCAATT
GCCGGTGGGCAGTGCGAAAGGGCTAAAGGTCAGGAATCGATTGCTCGGGG
TGTTCTGCTTGGCATCAGTGCTGGTATTCAGTACGCCAAACTGGATTTAT
CTCGGCGCTGGCAGGAGTCAGATTGTACCAACTGCTATCCGTAGCCAGTT
ATGTTAGCCTCTGAACGTACGTATCCAAATTTTTGCGTGATATGCGCCCT
TTCTGCTGGTCTTTTTCGGAAATGAAATGTTCGTTTCTTTGTCCGCAATA
CATGACGTCCTTGTATCTCAGCAACTGCCTCCTGCACGAACAGGTTATCT
ACGTTGCGCGGAACCCCAAAGATGTCAGTGTTAGCCTTTTCCACCACGTT
CGCCGCACGCAAAAGGCGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig72759:221..641+

>mRNA_Ecto-sp13_S_contig72759.18426.1 ID=mRNA_Ecto-sp13_S_contig72759.18426.1|Name=mRNA_Ecto-sp13_S_contig72759.18426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=156bp|location=Sequence derived from alignment at Ecto-sp13_S_contig72759:221..641+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCGACACCCAACAGGCGGTTCTTCAAGTCGCACTCTAACCTCAAGCAATT
GCCGGTGGGCAGTGCGAAAGGGCTAAAGGTTATCTACGTTGCGCGGAACC
CCAAAGATGTCAGTGTTAGCCTTTTCCACCACGTTCGCCGCACGCAAAAG
GCGGTG
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