prot_Ecto-sp13_S_contig7275.18425.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7275.18425.1
Unique Nameprot_Ecto-sp13_S_contig7275.18425.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7275.18425.1 vs. uniprot
Match: D7FSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ0_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 3.400e-92
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0 
Query:    1 MALYKSPVPGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTGEGLADSAARAEGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQE 149
            MALYKSPV GTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTGEGLAD+AARAEGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQE
Sbjct:  482 MALYKSPVAGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTGEGLADAAARAEGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQE 630
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BLAST of mRNA_Ecto-sp13_S_contig7275.18425.1 vs. uniprot
Match: A0A6H5K079_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K079_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 2.440e-90
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 0 
Query:    1 MALYKSPVPGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTGEGLADSAARAEGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQE 149
            MALYKSPV GTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTGEGLAD+AARA GEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQE
Sbjct:  812 MALYKSPVAGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTGEGLADAAARAAGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQE 960
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BLAST of mRNA_Ecto-sp13_S_contig7275.18425.1 vs. uniprot
Match: A0A835YHQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ7_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.720e-45
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 0 
Query:    1 MALYKSPVPGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTG-------EGLADSAARAEGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPG---------SGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILP 145
            MALYK P+P T++VRLGAS  V A P EL+G+LLE+AAMLGPDY+VD QE++ET SS   T                    +   HDTA+ WFSCTH+RQR+ RDFV+LRC+RPLP           GG+I+Y+SVDHP  PP P YVRG++++ GFV+LP
Sbjct:  235 MALYKWPIPRTRRVRLGASATVRAAPPELLGLLLESAAMLGPDYVVDGQEMIETLSSTAGTAGXXXXXXXXXXXXXXXXXADAGAHDTAIIWFSCTHRRQRMRRDFVVLRCYRPLPSIATGGGTGSGGGLISYASVDHPAFPPGPAYVRGRIEMCGFVVLP 395
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7275.18425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSJ0_ECTSI3.400e-9298.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K079_9PHAE2.440e-9097.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHQ7_9STRA1.720e-4552.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 3..153
e-value: 5.0E-14
score: 54.5
IPR002913START domainPFAMPF01852STARTcoord: 96..148
e-value: 4.7E-8
score: 32.7
IPR002913START domainPROSITEPS50848STARTcoord: 97..212
score: 11.837
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 7..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7275contigEcto-sp13_S_contig7275:4761..7042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7275.18425.1mRNA_Ecto-sp13_S_contig7275.18425.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7275 4761..7049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7275.18425.1 ID=prot_Ecto-sp13_S_contig7275.18425.1|Name=mRNA_Ecto-sp13_S_contig7275.18425.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MALYKSPVPGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQE
LLETFSSGVNTGEGLADSAARAEGEGPKHDTAVYWFSCTHKRQRICRDFV
ILRCFRPLPGSGGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQEE
GGGNGNGNDNDDDETSLHHSDAEHNRRGGPRRKKRQRLRGGKGGGAAAAA
AAGRRRSRSSASAIGDYAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom