prot_Ecto-sp13_S_contig72744.18423.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig72744.18423.1
Unique Nameprot_Ecto-sp13_S_contig72744.18423.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp13_S_contig72744.18423.1 vs. uniprot
Match: UPI00140DA057 (SOS response-associated peptidase family protein n=1 Tax=Marinobacter salicampi TaxID=435907 RepID=UPI00140DA057)

HSP 1 Score: 85.9 bits (211), Expect = 2.440e-19
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0 
Query:    2 WLTADGQVPDMVSRYLSKPQVTVPLRVASVSTFKRGTVSRDSEMLSAD 49
            WL +DGQVPDMVSRYL++PQ+TVPLRVA VSTFKRGTVS DSEMLSAD
Sbjct:  184 WLNSDGQVPDMVSRYLTQPQLTVPLRVAHVSTFKRGTVSLDSEMLSAD 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72744.18423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00140DA0572.440e-1985.42SOS response-associated peptidase family protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig72744contigEcto-sp13_S_contig72744:504..653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig72744.18423.1mRNA_Ecto-sp13_S_contig72744.18423.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig72744 504..677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig72744.18423.1 ID=prot_Ecto-sp13_S_contig72744.18423.1|Name=mRNA_Ecto-sp13_S_contig72744.18423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
MWLTADGQVPDMVSRYLSKPQVTVPLRVASVSTFKRGTVSRDSEMLSAD*
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