prot_Ecto-sp13_S_contig726.18399.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig726.18399.1
Unique Nameprot_Ecto-sp13_S_contig726.18399.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 5.550e-59
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
Query:   56 MVEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 157
            MVEQDIIYGGLVA AGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW
Sbjct:    1 MVEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102          
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Match: A0A836CFV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.440e-13
Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   44 QQQRRHARSSLTM-VEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTA-DARKRAEEEADDGW 157
            QQQR  + +++ M ++Q+ I G      GLA+G G+VA TEQ GV++ ERG +      K+QA  +ED  +EE DV  V   MR AL+ ++TEEEL  L A     R++E  DDGW
Sbjct:   44 QQQRAGSSTAIAMEMDQNTIIGIAAGVGGLALGIGLVAFTEQQGVKTAERG-IDEGMANKLQAKLLEDFELEENDVTSVTDRMRAALKQDKTEEELAELAAKQLAARSKEREDDGW 158          
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Match: K0TE04_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TE04_THAOC)

HSP 1 Score: 64.7 bits (156), Expect = 3.580e-10
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 0
Query:   48 RHARSSLTMVEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERGA-LSYERKMKMQAMFMEDDVVEET-DVDDVRYNMRKAL-RANQTEEELLALTADARKRAEEEADDGW 157
            R  RSSL+MV+ +II GG +A  G+  G G+VA  E  G RS+ERG  LS +   ++    MED  V+   D+  +   +  AL  +   E+E L L+ + +KR  EEADDGW
Sbjct:   44 RRPRSSLSMVDTNIILGGGIAVGGVVAGIGLVAFAENMGERSKERGGGLSDDMATRITGGLMEDVEVDSVGDLSSLTDKLEAALMESGGAEQEQLQLSEEDKKRIAEEADDGW 156          
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.760e-10
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   47 RRHARSS-LTMVEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERG--ALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 157
            RR A SS L M++  +I GG  A  GLAVG GM   +EQ   + E+RG  A+S   + KM AMFMED+V+ +T +DD    M  AL A + E    A+     ++     DDGW
Sbjct:   44 RRQASSSQLQMLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLPDTTLDDTVSRMEAALAAAKGE---AAVEEKVEEKPASSIDDGW 154          
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Match: A0A1Z5KBT4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT4_FISSO)

HSP 1 Score: 62.4 bits (150), Expect = 1.920e-9
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   52 SSLTMVEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERGA-LSYERKMKMQAMFMEDDVVEETDVDDV---RYNMRKALRANQTEEELLALTADARKRAEEEADDGW 157
            +SL MV+Q+++ G  V   GLA G G+VA TEQ G R++ERG  LS     ++    +ED  VE + VDD+      +  ALR      E   ++ +A+++A E+ADDGW
Sbjct:   32 TSLQMVDQNVLLGAAVGVGGLAFGIGLVAFTEQQGERAKERGGGLSESMSTRIAGGLLED--VEVSSVDDLGSLTAQLENALRQTGKTGESFEVSEEAKRKALEDADDGW 139          
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Match: A0A8J6C9X7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9X7_DIALT)

HSP 1 Score: 55.1 bits (131), Expect = 1.180e-6
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query:   56 MVEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETD-VDDVRYNMRKAL 129
            M++Q+I+ GG +   G   G  +VA TEQAG R+  RGALS E+  K    FMED+ V+++  +DD+   M  AL
Sbjct:   42 MIDQNILVGGAIGLVGTLGGVALVAFTEQAGERTNARGALSSEQAAKFAGKFMEDEEVDQSGTIDDIVAKMEAAL 116          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig726.18399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LC02_ECTSI5.550e-5999.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFV7_9STRA8.440e-1343.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0TE04_THAOC3.580e-1040.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4ECZ2_9STRA6.760e-1041.23Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5KBT4_FISSO1.920e-939.09Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A8J6C9X7_DIALT1.180e-642.67Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.834
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig726contigEcto-sp13_S_contig726:19184..21348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig726.18399.1mRNA_Ecto-sp13_S_contig726.18399.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig726 18274..22042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig726.18399.1 ID=prot_Ecto-sp13_S_contig726.18399.1|Name=mRNA_Ecto-sp13_S_contig726.18399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
MRSIGALLFFLPFTSAFLAPTASLPRSGRATSPFVSGVQASSQQQQRRHA
RSSLTMVEQDIIYGGLVAAAGLAVGAGMVALTEQAGVRSEERGALSYERK
MKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAE
EEADDGW*
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