mRNA_Ecto-sp13_S_contig7259.18395.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7259.18395.1
Unique NamemRNA_Ecto-sp13_S_contig7259.18395.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A6H5J663_9PHAE (2-Hacid_dh_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J663_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 9.640e-176
Identity = 264/273 (96.70%), Postives = 268/273 (98.17%), Query Frame = 3
Query:  906 GKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            GKKDLLS+LF LAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEV G TLGV+GYGDIGQAAAVKAKAMGMK+IAQRRRPELSRGDGVADEVLGAGQV GEVIAKSDYILVAAALTPETTGMVGAAELA ARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLF+DNVGNFVKGEEVSIHLVDKRAGY
Sbjct:   72 GKKDLLSRLFPLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVFGTTLGVVGYGDIGQAAAVKAKAMGMKIIAQRRRPELSRGDGVADEVLGAGQV-GEVIAKSDYILVAAALTPETTGMVGAAELAMARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFSDNVGNFVKGEEVSIHLVDKRAGY 343          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A6H5KFZ0_9PHAE (2-Hacid_dh_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFZ0_9PHAE)

HSP 1 Score: 428 bits (1101), Expect = 1.050e-141
Identity = 215/273 (78.75%), Postives = 247/273 (90.48%), Query Frame = 3
Query:  906 GKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            G KDLLSQLF LAPKLAW+HSR  GVD+ALFP L+E+D VSLTNARGLF+S+LAEH VLSCLYFAKDVDRWKRNQ+ RKW+++ V+EV   TLG+IGYGDIG+AAAVKAKAMGMK+IAQRRRPELS GDG+AD+V GAGQV G+VIA+SDYILVAAALTP T GMVGA EL+RA+PHAVII+IGRGPLIDE AMTQML+DGRLRGA+LDVF  EPLP +S LWGLENVLLSPHNADL AH+L+DSVR FA+NV NFVKG+E+SIH+V+K+AGY
Sbjct:   71 GTKDLLSQLFPLAPKLAWVHSRLVGVDAALFPALVEADHVSLTNARGLFASALAEHVVLSCLYFAKDVDRWKRNQKCRKWERYHVAEVSRTTLGIIGYGDIGRAAAVKAKAMGMKIIAQRRRPELSIGDGIADQVFGAGQV-GDVIAQSDYILVAAALTPATMGMVGAEELSRAKPHAVIISIGRGPLIDEVAMTQMLQDGRLRGAALDVFTTEPLPTDSPLWGLENVLLSPHNADLAAHYLSDSVRKFAENVDNFVKGDEMSIHVVNKKAGY 342          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A835Z904_9STRA (D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z904_9STRA)

HSP 1 Score: 342 bits (876), Expect = 3.310e-108
Identity = 177/273 (64.84%), Postives = 212/273 (77.66%), Query Frame = 3
Query:  906 GKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            G + L+S L+   P L W+HSR AGVD  LFPEL+ S RV LTNARGLFSS+LAE+  L+CLYFAKDVDRWK  QRDR W++F V E+ G TLGV+GYGDIGQ+AA  AKA+GM+VIAQRR       DGVADE  G   V G+V+A+SDY+ VAAALTPET GM+GAA LARARPH VIIN+GRGPLIDE A+ + LR+GR+RGA+LDVF  EPLP +S LWG+ NVLLSPHNAD+TA FL+DSVR FA +   F +GE  ++H+VDK  GY
Sbjct:   62 GGRALISSLWPHMPNLKWMHSRFAGVDHVLFPELVAS-RVPLTNARGLFSSALAEYVALACLYFAKDVDRWKAQQRDRVWEKFVVQEIRGQTLGVLGYGDIGQSAARLAKALGMRVIAQRRNAAAPP-DGVADETFGPDGV-GDVVARSDYVCVAAALTPETRGMLGAAALARARPHTVIINVGRGPLIDEAALAEALREGRVRGAALDVFETEPLPRDSALWGMGNVLLSPHNADMTATFLHDSVRRFAQDAARFARGEPFTLHVVDKEKGY 331          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: I2CQU9_NANGC (D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQU9_NANGC)

HSP 1 Score: 291 bits (746), Expect = 7.390e-88
Identity = 158/288 (54.86%), Postives = 206/288 (71.53%), Query Frame = 3
Query:  867 PGAIHEHDVAHLA--GKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            P  +   DV  LA    ++LLS L+     L WIH   AGVD  LFP+LI S  + LTNARGLFSSSLAE+ VL+  YFAKD+ R    + ++KW+++CV E+ GATLG++GYGDIGQA    AKA GM+V+A +RRPEL   DG+AD VLG  + + E+IA+SDY++VAAALTP+T G++ A ELA A+P  VIIN+GRGPL+ EE + + LR+GR++GA++DVF  EPLPA+   W +  VLLSPHN D+TA FL DSVR F +N   FVKG  +  +LVDK+AGY
Sbjct:  127 PSLLGSVDVLLLAPPAGRELLSSLWPSFTNLKWIHCIFAGVDHVLFPDLIHSS-IPLTNARGLFSSSLAEYGVLAMSYFAKDLPRLLAQKAEKKWERYCVEELRGATLGIVGYGDIGQACGRLAKAFGMRVVALKRRPELGGKDGIADAVLGR-EKIDELIAQSDYLIVAAALTPDTRGIISAKELASAKPSLVIINMGRGPLLVEEDVIEALREGRVKGAAMDVFDTEPLPADHPYWEMPQVLLSPHNMDMTATFLFDSVRFFTENCQRFVKGGALR-NLVDKKAGY 411          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A7X2TRU1_9BACT (D-2-hydroxyacid dehydrogenase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7X2TRU1_9BACT)

HSP 1 Score: 275 bits (702), Expect = 1.430e-82
Identity = 144/274 (52.55%), Postives = 196/274 (71.53%), Query Frame = 3
Query:  903 AGKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            +G + LL QL+ +AP+  W+HSR+AG+D  LFPELIES  V LTN  G+FS SL E    + LYFAKD  R  RNQ   +W+QF V EV G T+G++GYGDIG+AAA + KA+GM+VIA RRRPE S+GDG+ DEV G  +++ +++++SDY++ AA LTPET G++G   +A  +   V++N+GRGP+IDE A+   L + R+RGA+LDVF KEPLP     +GLENVLLSPH AD T  +L D+++ F DN   F KGE +  ++V+KR GY
Sbjct:   54 SGTRALLQQLWPIAPRARWVHSRAAGLDGVLFPELIESP-VPLTNGSGVFSRSLGEFVAAAALYFAKDFRRMIRNQAAGRWEQFDVEEVYGKTMGIVGYGDIGRAAAERGKALGMRVIALRRRPEKSQGDGLIDEVFGPDRLL-DLMSESDYVVAAAPLTPETKGLIGVEAIASMKSTGVLMNVGRGPVIDEAALIAALIEKRIRGAALDVFEKEPLPEGHAYFGLENVLLSPHCADHTPTWLEDAMQFFIDNFERFRKGEPLK-NVVEKRLGY 324          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A4P5U6A0_9BURK (2-hydroxyacid dehydrogenase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U6A0_9BURK)

HSP 1 Score: 269 bits (687), Expect = 2.270e-80
Identity = 132/274 (48.18%), Postives = 200/274 (72.99%), Query Frame = 3
Query:  903 AGKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            +  + L+ Q+F++APKL W+H+R+AG+D+ LFP L++S  V LTN+ G++S SL E    + L+FAKD  R  RNQ   +W+QF V E+ G T+G++GYGDIG+AAA +AK +GM+VIA RR+P+ SR D + DEV+G   ++ E++ +SDY++VAA LTP+T G+VGAA +   +P  V+IN+GRGP++DE  +   LR   +RGA+LDVF +EPLP +   + ++N+LLSPH AD T  +++D++R F  N+G F +GE + ++LVDK++GY
Sbjct:   54 SASRSLVQQVFAMAPKLRWVHTRAAGLDTLLFPALVDSP-VPLTNSSGVYSRSLGEFVAAAMLFFAKDFRRMLRNQAAGRWEQFDVEELHGRTMGIVGYGDIGRAAAAQAKGLGMQVIALRRQPDKSRADSLVDEVMGQSDIL-ELMRRSDYVVVAAPLTPDTRGLVGAAAIGAMKPSGVLINVGRGPVVDEAGLLSALRSKSIRGAALDVFDQEPLPQDHPFYAMDNLLLSPHCADHTQTWVDDAMRFFIVNLGCFSRGEAL-VNLVDKQSGY 324          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A482RWC2_9ARCH (D-2-hydroxyacid dehydrogenase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWC2_9ARCH)

HSP 1 Score: 265 bits (677), Expect = 1.060e-79
Identity = 139/269 (51.67%), Postives = 185/269 (68.77%), Query Frame = 3
Query:  921 LSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAK-SDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            +S++ +  P L W+HS +AGVD  L PEL+ +D ++LTNARG+F+ SLAE+ +L+C YFAKD+ R KR Q    WD+F V+++ G T+G++GYG+IG   A  AKA GMKV+A RR PE S  D + D + G  Q+  +V+ K SD++++  ALT ET G V A  L+ A+   V+INIGRG L+DE A+ Q+LRDG L GA+LDVFC EPLPA+S LW L NVL+SPHNADLT+     SVR F      F+ GE V   +VDK AGY
Sbjct:    1 MSEIINEMPFLVWVHSITAGVDHLLCPELVNNDEITLTNARGVFAGSLAEYVMLACSYFAKDIPRMKRQQASSVWDKFMVTDLRGKTMGIVGYGNIGLHCARLAKAYGMKVLALRRNPEQSVHDKLVDTLYGPSQL--DVLMKESDFLVICMALTSETKGYVDAQHLSMAKKGQVLINIGRGALVDEAALVQVLRDGPLAGAALDVFCTEPLPADSPLWQLPNVLVSPHNADLTSDSRQSSVRYFTQLCQKFISGEGVDEAVVDKSAGY 267          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A3D1ARK2_9BACT (Hydroxyacid dehydrogenase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A3D1ARK2_9BACT)

HSP 1 Score: 265 bits (676), Expect = 1.890e-78
Identity = 135/274 (49.27%), Postives = 197/274 (71.90%), Query Frame = 3
Query:  903 AGKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            AGK+ +  Q F +AP L WIHSR AG+DS LFPEL+ S  V LTNARG+FS SL E  +L  L+FAKDV R  R+Q   KWD F V+E+ G T+G++GYGDIG+AAA +A+AM M+++A RR+P+ S+ D + ++  G   + GE++ + DY++ AA LTP T  ++  A+  + +P AV++N+GRGP+IDE A+ + L++G L GA+LDVF  EPLP +S L+G+ NVL+SPH+AD T  +L+++++ F DN   F +G+ ++ +LVDK AGY
Sbjct:   77 AGKRAVFEQTFHMAPHLEWIHSRYAGLDSVLFPELVRSP-VPLTNARGVFSQSLGEFVILGMLFFAKDVRRLLRSQAAAKWDPFTVTELRGQTVGIVGYGDIGRAAAQRARAMHMRILAVRRQPQKSQNDPLVEQTFGLDGL-GEMLPQCDYVVCAAPLTPATKHLMSRAQFRQMKPGAVVLNVGRGPVIDEAALIEALQEGHLGGAALDVFEVEPLPPDSPLFGMRNVLISPHSADNTKTWLSEAMQCFLDNFDRFHRGQPLA-NLVDKHAGY 347          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A7Y5GF20_9BACT (D-2-hydroxyacid dehydrogenase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7Y5GF20_9BACT)

HSP 1 Score: 261 bits (668), Expect = 1.280e-77
Identity = 138/273 (50.55%), Postives = 196/273 (71.79%), Query Frame = 3
Query:  906 GKKDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            G   LL +L+    ++ W+HS SAG+D+ LFPELIES  V +TN+RG+F+ SL E  + S L+FAK++ R  R Q++  W  F V E+ G T+G++GYG+IG+AAA +A A+GMK IA RRRPELS GD + D  LG   +   ++ ++DY++V+AALTP T GM+G AEL   +  AV+IN+GRGP++ E A+ + LR+ R++GA+LDVF +EPLPA    +GLENVLLSPH+AD TA +L+++++LF  N   FVKGE++  +LVDK  GY
Sbjct:   53 GFAPLLRELWPDVARVRWVHSFSAGLDNVLFPELIESAAV-MTNSRGVFARSLGEFVIASVLFFAKEMRRMVRQQQEGVWAPFDVEEIHGQTMGIVGYGEIGRAAAERAHALGMKTIALRRRPELSGGDPLVDRALGPDGLFN-LLREADYVVVSAALTPSTRGMIGEAELNAMKRSAVLINVGRGPVVVESALVRALRENRIKGAALDVFDQEPLPAGHPFYGLENVLLSPHSADHTATWLDEAMQLFVGNFERFVKGEQLH-NLVDKSEGY 322          
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Match: A0A6U0SYG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0SYG0_9STRA)

HSP 1 Score: 260 bits (664), Expect = 6.730e-77
Identity = 142/274 (51.82%), Postives = 186/274 (67.88%), Query Frame = 3
Query:  912 KDLLSQLFSLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNARGLFSSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVIGYGDIGQAAAVKAKAMGMKVIAQRRRPELSRGDGVADEVLGAGQV-VGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLR--DGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEEVSIHLVDKRAGY 1724
            K+++  L    PKL WIHSR AGVDS L P+L+    V LTNARG+FSSSLAE+ + +C +F+K     ++NQ DRKW++  V E+ GAT+GV G+GDIG++ AV  KA GM+++AQRRRPEL  GD + DE  G GQ  + ++ A+SDY +VAA LTP+T  M+ A  LA  +  AV+IN+GRGPL+DE A+   L   D  L G +LDVF  EPLP  S LW   N LLSPH AD+T  F+ DSV +F +NV  F+ GE +  +LVDK AGY
Sbjct:   60 KEIVDTLLDRMPKLEWIHSRWAGVDSFLTPKLVGRQDVPLTNARGVFSSSLAEYTLFACGFFSKRARELQQNQADRKWEKLTVKELRGATMGVAGFGDIGRSCAVLGKAYGMRILAQRRRPELCEGDPIVDESFGQGQEQLCQMAAESDYFVVAAPLTPQTRQMISADVLASLKQGAVLINVGRGPLVDETALCDALENEDHPLAGVALDVFEHEPLPDTSRLWHNPNALLSPHCADMTPTFMEDSVHMFVENVKLFLAGEPLR-NLVDKDAGY 332          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7259.18395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J663_9PHAE9.640e-17696.702-Hacid_dh_C domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KFZ0_9PHAE1.050e-14178.752-Hacid_dh_C domain-containing protein n=2 Tax=Ect... [more]
A0A835Z904_9STRA3.310e-10864.84D-isomer specific 2-hydroxyacid dehydrogenase n=1 ... [more]
I2CQU9_NANGC7.390e-8854.86D-isomer specific 2-hydroxyacid dehydrogenase n=1 ... [more]
A0A7X2TRU1_9BACT1.430e-8252.55D-2-hydroxyacid dehydrogenase n=1 Tax=Bryobacteral... [more]
A0A4P5U6A0_9BURK2.270e-8048.182-hydroxyacid dehydrogenase n=1 Tax=Comamonadaceae... [more]
A0A482RWC2_9ARCH1.060e-7951.67D-2-hydroxyacid dehydrogenase n=1 Tax=archaeon Tax... [more]
A0A3D1ARK2_9BACT1.890e-7849.27Hydroxyacid dehydrogenase n=1 Tax=Bryobacterales b... [more]
A0A7Y5GF20_9BACT1.280e-7750.55D-2-hydroxyacid dehydrogenase n=1 Tax=Bryobacterac... [more]
A0A6U0SYG0_9STRA6.730e-7751.82Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7259contigEcto-sp13_S_contig7259:1403..7339 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score311.6
Seed ortholog evalue2.2e-82
Seed eggNOG ortholog2880.D8LGJ7
Model size2231
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.hydroxypyruvate reductase activity
EggNOG OGsCOG1052@1,KOG0069@2759
Cds size489
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7259.18395.1prot_Ecto-sp13_S_contig7259.18395.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7259 1907..4450 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463993.4589903-UTR-Ecto-sp13_S_contig7259:1402..19061681463993.4589903-UTR-Ecto-sp13_S_contig7259:1402..1906Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7259 1403..1906 -
1681463993.5211594-UTR-Ecto-sp13_S_contig7259:4450..45221681463993.5211594-UTR-Ecto-sp13_S_contig7259:4450..4522Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7259 4451..4522 -
1681463993.5317326-UTR-Ecto-sp13_S_contig7259:5091..52151681463993.5317326-UTR-Ecto-sp13_S_contig7259:5091..5215Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7259 5092..5215 -
1681463993.5422082-UTR-Ecto-sp13_S_contig7259:6297..73391681463993.5422082-UTR-Ecto-sp13_S_contig7259:6297..7339Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7259 6298..7339 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463993.4712532-CDS-Ecto-sp13_S_contig7259:1906..21171681463993.4712532-CDS-Ecto-sp13_S_contig7259:1906..2117Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7259 1907..2117 -
1681463993.480976-CDS-Ecto-sp13_S_contig7259:2508..26001681463993.480976-CDS-Ecto-sp13_S_contig7259:2508..2600Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7259 2509..2600 -
1681463993.4935055-CDS-Ecto-sp13_S_contig7259:3072..31681681463993.4935055-CDS-Ecto-sp13_S_contig7259:3072..3168Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7259 3073..3168 -
1681463993.5103707-CDS-Ecto-sp13_S_contig7259:4360..44501681463993.5103707-CDS-Ecto-sp13_S_contig7259:4360..4450Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7259 4361..4450 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7259.18395.1

>prot_Ecto-sp13_S_contig7259.18395.1 ID=prot_Ecto-sp13_S_contig7259.18395.1|Name=mRNA_Ecto-sp13_S_contig7259.18395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MGMKVIAQRRRPELSRGDGVADEVLGAGQVVGEVIAKSDYILVAAALTPE
TTGMVGAAELARARPHAVIINIGRGPLIDEEAMTQMLRDGRLRGASLDVF
CKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGEE
VSIHLVDKRAGY*
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mRNA from alignment at Ecto-sp13_S_contig7259:1403..7339-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7259.18395.1 ID=mRNA_Ecto-sp13_S_contig7259.18395.1|Name=mRNA_Ecto-sp13_S_contig7259.18395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5937bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7259:1403..7339- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGGCTCACCAGTGGGCGGCAGCGCATTTTTGGGACATTTTCAAGAAGC AACCACGGCGCCCATGGCAAGAAGAGAATGGCAATGAATTCAAACATGGC TAGTTCGGTTGTCTGTCTGTAGACAGGAGGCGGGGGGACGAAATGTGCAC CTTTTTCAAGGAGATTGCGACTTGATGGGGGGCACTCCAAACTCGGGTAT GGCTGGTGATTTGTTTTCTGTTTTCCGCGGAGATGCTTTGAAGCGTGAGC GTCACAGGTTAGTTGTTTTCAGCACCCCTGATAGTAGGTGTTATTTAGCG AGGTAGGGGTAGGGGAACATGGGAGGCTAAAACAGGCACCTTGTGAGGCC AACGCATCGAGCAATTGTGCCAGCGAGGAGCATAAGCGGGCAATAGAGCA CATGACAAGCGAAGGCAGATGCACATGGTTGCTATTCCCTTGGTTGAATC TTCATTCGGGACATGTCCGGCAGTGAATGAAGATTGGCGAATGAACTGTA ACCCTCCCTTGTCACCACCAACAACCCACGCCGCCCCCCGCCCCATCCCG CACGACCTGGGGAACGTTGATTGAGTGTGACGTACGGCTACGCCTGGCAC ATCGAACAACAGTGAGAAAGCGATCCCACCGTTCTGTAGGACATGAGTGT CGGTCGCAGCAAAGTTCAAAAGAGGAACAGCATCCGTAAGGGTCACTGTA TGATCCCACGCAATATTTGGCAGCAACGTGGAGAGTGGCCGGTTGTTGGC ATCGCAGGAATGGTGGTCCATCTCGAAGGGCACGCGTGACCAATAGTGGA AAGGCTGTAAAGCAACCCCGGCTTCCCTACCCCCGCGTGGACACCACCGA CCACTCTCGCCAATATCCGGGCGCAATCCATGAACATGACGTCGCCCACT TGGCAGGAAAGAAGGACCTGTTGAGCCAGTTGTTCTCCCTGGCGCCCAAG CTGGCATGGATACACAGCCGGAGCGCGGGGGTGGACAGCGCCCTTTTCCC CGAGTTGATCGAATCCGACCGCGTATCTCTGACTAACGCGAGGTAAGCGA AACGACGCAGCAGTGTACGAAGCCATGTTGTTGTCATTGCTGCACGTAGG GGAAAGCTTACAGCAGAAATGCCAGAGTATTGTACATAAAGGGGCACACA ACATTATTACCAGAGAGGATTTTTGTACATAGAGAGGCGCGCCTCATTCA CAACCCGTGTGTTGGCCGGCTGGTTTTCTTCCAGGTAGACACGGGATTCC ACCTCTTTGCACGGCAACATGTTGTGCACGGTACGGGGGGGCACCGTTGA TGTTTAGAGCGGGACAAAATGGTTCTTTTTTCGAAGACGCCGCCGACGCC GACGCCTAGAACGTCAAAAGAAACGACGCTGAGATGCTTTTTTTTAGTCG CTTACTGAAGCCCCTAAATGGCTCGTTTCGAGTCCCTTCATCATTCACTC GTTCCAGGTGTTGTTTCCATCTACTCACCGACACTTTTTTTTTTTGGTCC AACTCGATGCTGACTGTTTCCCCCGGAAAAAAAAATGGCACCATATGGTT CTCCCCCATCATTCGCTACAAAATCAAAGGTGGCTGAATGTACAGTGAAC GAGAGGTAATGTTGCTGCTGTATAAACACACGCGTGGGTCTGATGCTGGT TGGGATGGGGCAGAATATACGAGGAACAAGGAAATGAAAGAATGCACATG TTACGTAGGGCAAACGTGAGACGCATTATCTTTGACAACCTCACTATTAT TACCAACGTGCATTTTCGCGTACATTGCATGTACGTATGTTGTAACATTT GCGTTGGTCTTGTACGCAACTTTGTCTGAAAGTCTGCGCGCGCCTTGGTT AAAGCTTCTTGCACACCAACATCAACGCTTATGGGAGGCTCGTTGCACAC TAACGTCAACGTTCGTTCGAAACGCACGGGGGGACAGGCCATCCCGAAAC CCACAGAAGAACCGCCCTGTCGCTGCGTGCTTTGACGTGTGTACAGCATT TGGGCTTTTATTGTGGCGCCAAAAACAAACGTTGACCTCTTCTTTCTCTC TTTCCTCCCGTTCCTTCTCTTTGGCTTATTTCGCTCACTCGCTTTTGTGT GCGTCACTTGCTGCGGCGCGAAAGGGGGTTGTTCAGCTCGTCCCTTGCGG AGCACGCGGTTCTGTCGTGCCTGTACTTCGCGAAGGACGTGGACCGCTGG AAGAGGAACCAACGAGACAGGAAGTGGGACCAGTTCTGCGTGTCAGAGGT GCGACGATCAAAGTTCCTGGCCACCTTCTCTGTGGACCCTCTGTTTCCTA CTCTATACACGACCTCGGCATTGTTTCAGTGTTTACGTGTGTCGTGTATT GTCTCGAATCTGATCCTCTGTTCACCTCACCGCCTTCTGTCCGCTATCCT TTTGAGCGGTCAGTGGTCTTGGTGTTGTTTTTTTTACGGGGGGTTGGCCT TCTGGCTGCCTGGACACTGCATTGTCGGGACATGTGAGTTCATAATCCAC CCCCCCCTTATGTTTCGCATTCAACAATGCTGTCAGGAATGAGCTACAGA TGAATCCGTTAACCGGCCTCCGGAAGCAGTAGCCAAACATCAACAGAACG CAAAATTGCCTCCGTCGCCTAAACCCCCCCCGATTTGTTCAACGCAAAAC ACAAGATCGCACTAGGCGTACACCTTGTTCGCCCGGCACCCGGGAATGGC TTGCTGCATCGCATGACCACACCTTGCCATGCTCGTCGTGTTCGGCACAA ACACGTGGCCCGTCTTCCCGCGACTCATGGGCGGGGCACGAACGACAAAC TTTCCACGCGTAAATAGGTGTTGGGTGCCACTCTGGGGGTTATTGGGTAC GGAGACATCGGCCAAGCGGCGGCCGTGAAGGCCAAGGCGATGGGAATGAA GGTCATCGCCCAGAGGCGGCGGCCGGAGCTGTCACGGGGGGACGGGGTCG CCGATGAGGTTCTCGGCGCCGGCCAGGTAGTGCTACCAAGATTGGGGGGG GGGACATCGTAGACAGAGAGAGGTAGGGGGGGGGTACTTATAGCGGTGTA TGCCGTAGTCGTTAGCCCATTGACCTCGCATACCTACAAAGCCGGGACGG AGCACGCCGGTTTCTCACCGAACCAGGCTCTCACATCACCAAGCGCGAAG CGCAGTGAGGTACTCGGTGAGTCGTATGACGGGTGCGCTGCACCCTGCCA AGGGTGTTCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTGC GTATGACTTTATCTATTTTCTGGTGCTATGACTTCCAGAGACAGTAATAA GCACTGTGTAACTGCCTCGAGGGTGCTTGACCATTTCAACACAACATAGT GTGATTATCCCCCGTGCGCGGAGTGAGGGTTGTCGACCACGAACAACATA ATCTACTCGATCACCATTCATAGTTACCGCAAAAGAAAACCAAACCCAAA GAAAAAGCGGTCACCTGGTTGCTGAGCTCACGAAGTGATAGGCTAGTTTT GCAACATCGCTGCCAAACGACGAAAACCCAACCCCGATGGAAACACCGGG GAAGGGCGAGGAGGGGGGGGGGTCGATCTGGGAAGTGATGTGTGCCGAGG GGCGGGTAGATGGGCTGCTGCCGTTACGATCCTAGAAGGCACGATGGGTA TCGAACAGCGCGCCACGGACATCTTCACACGTGTGAACGGGAAACTGCGC TACAAATACCTTTTCTTTCGAGCGCCCATGTGTGTCTATCCTGATGTTAA TTCTTCATGTTCGTCATCTAGGAGAATGACGACTGGTCGCCACGCTTACC CATTGAATGCCGCGGACTCCGCGTTGCCGTAACGCGATCACTGAACGATC GATCAAGTTCATTTTTTGCCGCCCCTATTGCTCTCGTTTGTTGCGACGGC TTTTTTGCTGCATCGCAGCTGCAAAGCAGCAACGTCCTGCCCGTGGGTGT GACGCGTGTCACCAGTCTGCCATGCTTTCTCATTGATTATTTCATTGTTC ATAGTGGCTAGCACTACACAGCACGCTGTTTCCTTGTGCGACACAGACAG CTGTCTCTGAGCGAGATTCGTGTGTGCTACATTTTGTGGTTGCTACATTG CAGTTTGTAGTATCGCCATCGTCATTCATTTGTTTTCTTATGCACTCGGG GTGCTTGTTTGTATTTCGCAGGTGGGCGAGGTCATCGCCAAGTCTGACTA CATACTGGTGGCGGCAGCGTTGACGCCCGAGACAACAGGCATGGTTGGAG CCGCGGAGCTCGCAAGGGTGAGGATCCTCACTATAGTTGGTGTTTCGTCG GTGGAGGCTAGGCCAGCACACATGCAAAGAACGGATTTTTTGTCTGGATC ACTGCTTTTTAGGCAGTTCATTGGAGGCCGAGTTTGCCGTTTCGAAACGG CCTCGGTCGACGGTGCCCGCTACAGGTACATCCGCTGAGCTTGTGCAAGC AAAAGCCGCACGTATGCAAGCTCTGCCAGCACCTCTTTGCGTTTGCTGTG GTGTAGCACTTCATTTTTCTCTCTGTGTTGTTCGAGTTTACGTGCCATTG CCGCCGAGCATCATAGGCTGCAGTGACTCAATTGTGATCCTCGCACGAGA CTGACTGGTCCAAACACCGTGGCAGCCGTCAGTGTAGATCTTTCACGTGC AGGTAACTCGCGATGATGCTCAACCGATTGTATTGTGTCTACCGTACAGT GAGCTTTTCCCTCTCATCCCACTCTTTCTCTCTCTGCAGGCGAGACCCCA CGCCGTGATCATCAACATAGGCCGTGGACCTCTCATCGACGAGGAGGCGA TGACACAAATGCTGCGGGATGGACGACTAAGGTGTGTGTGTGTGCGAGAC GGAGAGCCAGAGTTGAGACAGGGGGGAACAAAGAGAGAGAGAGAGAGAAA GTCAATGTAGTCGACGAACGCAGAGGCGAGAACAGCGAGAGTTTTTGTTT GGGTCACATTGTTTTCACAAGGCCATCGATGACGCGACCTCTATTTGGAT GATTCGGACAACTTGTCCGAAAACACAAACTGTGGAATGAGGCACCAAGG GTGTTCCTATCTTCCGAGCTCAATGCGAGAAAAGCTTCCAGCTCAGCCGA TTGATTTTGTGTTCTTACTCCTGACCCACATTTGCCCTGATCTGATACTC CGCATACCTTTTCGCTTCGTCCATTTTTTGTTGCATCTTTTTTGGCACTT GTCCACACGAAAAAAAATCAAGGGGTGCTTCTTTGGACGTGTTCTGCAAA GAGCCCCTGCCCGCGGAGAGCGATCTGTGGGGCTTGGAGAACGTGCTACT GTCGCCTCACAACGCCGACCTGACGGCGCACTTCTTGAACGACAGCGTCC GCTTGTTTGCTGACAACGTGGGCAACTTTGTCAAGGGCGAAGAGGTGTCG ATCCACCTTGTGGATAAGAGAGCGGGATATTAAACTGCAATTTCCCCGAT TTAGCCTTGTAGGCAACGTTGTCAAGTTTTGTCCAAAGGGGGCGAGAGCA GACAGCAATAGTGCAGACAGTTTTGCTACAATGATGTTGTCAAGTTGGTT GGTTGGGTTGTTACTTCAACGTTGGCTGCTTGGTTTGGTCTGGCCGGATG GTTTTGTCTATGATGTTGGTACTCTTCGTCATGACGTGCTTCGTAGTGCT TTGAGAGTCCGATGCTGTACAAGAACCGGGGTCCGATGTGACTGATTTTG TTTCGATTTGTGTTGTCGTGCGTTTGGTAGACGTCAGCAGGATTTGTCTC TGGTTTTCTTTGATTGGTTCGTGCACCAATGAGATTGTTCTTGTGGTTTT GGAGGTGGCCAAGTCACACGAGGCGATCAGTCGGAAGTTCAACTTGGAAG ATGACCCGAAAAAGTTCGATTTTTCATTTCGTGTGAACGTTTCATCTAAC GCGGTTGATGCACGTCAAATTCGCCGCATTTGCCTGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7259:1403..7339-

>mRNA_Ecto-sp13_S_contig7259.18395.1 ID=mRNA_Ecto-sp13_S_contig7259.18395.1|Name=mRNA_Ecto-sp13_S_contig7259.18395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=489bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7259:1403..7339- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAATGAAGGTCATCGCCCAGAGGCGGCGGCCGGAGCTGTCACGGGG
GGACGGGGTCGCCGATGAGGTTCTCGGCGCCGGCCAGGTAGTGGGCGAGG
TCATCGCCAAGTCTGACTACATACTGGTGGCGGCAGCGTTGACGCCCGAG
ACAACAGGCATGGTTGGAGCCGCGGAGCTCGCAAGGGCGAGACCCCACGC
CGTGATCATCAACATAGGCCGTGGACCTCTCATCGACGAGGAGGCGATGA
CACAAATGCTGCGGGATGGACGACTAAGGGGTGCTTCTTTGGACGTGTTC
TGCAAAGAGCCCCTGCCCGCGGAGAGCGATCTGTGGGGCTTGGAGAACGT
GCTACTGTCGCCTCACAACGCCGACCTGACGGCGCACTTCTTGAACGACA
GCGTCCGCTTGTTTGCTGACAACGTGGGCAACTTTGTCAAGGGCGAAGAG
GTGTCGATCCACCTTGTGGATAAGAGAGCGGGATATTAA
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