mRNA_Ecto-sp13_S_contig724.18371.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig724.18371.1
Unique NamemRNA_Ecto-sp13_S_contig724.18371.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: D8LCA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA5_ECTSI)

HSP 1 Score: 1138 bits (2944), Expect = 0.000e+0
Identity = 569/624 (91.19%), Postives = 584/624 (93.59%), Query Frame = 1
Query:    1 MPLTRIRQAVGVVSLLSAEVAHQQAFGAEAAWGAGSCRCAVLYSGHVRSFVQPRVHLSHKKNLLEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGILNPRSIEYHQEQAGYIPNGCETGCEINAYWQLYKMKAVYRMMEEHEATTGLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSIEGGVCEVLHPHKLACEMLRASGLMGPLTAASDGGQPSSCLDMMNRWHRHACVEMFPPHGYRTQGGLEATADGE-EGKEARLVGSEPGGGLELRDGGRGGGEDERRQPVPTVHRSKDGGEAPWAGAAGGTAAAKTLSFEEATRRIEGVNGNLSDLLGAMRIHVSPTQERLEYYVAHHYPFHQVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDTAATADGKENASPRGPA------LDRFTDEEGKREAALSSSQVYDDGEGTGGRGGDVEDIEEHVLVLNTTADEEERLQAAVNCSLIESLHDVWVSLLDNKFEPSEEICRGPAGPCLHTATPKEAS 1851
            MPLTRIR+AVGVVSLLSAEVAHQ AFGA+AA G  SCRCAVLYSGHVRSFVQPRVHLSHKKNL+EQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVG+LNP SIEYHQEQAGYIPNGCETGCEINAYWQLYKMKAV+RMMEEHEATTGLSY WV+RSRLDIAWMLP+PPLSRFPPTRVYAGHNFFPLSDQFLLSPR FAQSIFGAVSLCYDC+ALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRS EGGVCEVLHPHKLACEMLRASGLMGPLTAA+ GGQPSSCLDMMNRWHRHACVEMFPPH YRT+GG EATAD   EGK ARLVG EPGGG ELRDGGRGG EDE+RQP PTVHRS+DGGEA WAGAA GTAAAKTLSFEEATRR+EGVNGNLSDLLGAMRIHVSP QERLEYYVAHHYPFHQVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSD AATADGKE  SPRGP        D F DEEG+RE A SSSQVYDDGEGTGGRGGDVEDIEE+VLVL TTADEEE LQAAVNCSLIE LHDVWVSLLDNKFEPSEEICRGPAGPCLHTATPKEAS
Sbjct:    1 MPLTRIRRAVGVVSLLSAEVAHQPAFGADAASGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGLLNPLSIEYHQEQAGYIPNGCETGCEINAYWQLYKMKAVFRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRMFAQSIFGAVSLCYDCKALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHRHACVEMFPPHDYRTEGGSEATADDSGEGKNARLVGGEPGGGRELRDGGRGGREDEQRQPAPTVHRSRDGGEAAWAGAADGTAAAKTLSFEEATRRVEGVNGNLSDLLGAMRIHVSPMQERLEYYVAHHYPFHQVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDAAATADGKEGGSPRGPGERRGHTFDLFADEEGQREVASSSSQVYDDGEGTGGRGGDVEDIEENVLVLKTTADEEEGLQAAVNCSLIEPLHDVWVSLLDNKFEPSEEICRGPAGPCLHTATPKEAS 624          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.190e-40
Identity = 111/354 (31.36%), Postives = 161/354 (45.48%), Query Frame = 1
Query:  121 VLYSGHVRSFVQPRVHLSHKKNLLEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGILNPRSIEYHQEQAGYIPNGC------------------------ETGCEINAYWQLYKMKAVYRMM--EEHEATTGLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRES---KVPAQVEGLLRVALRRGHGHGAVPFGYYE-FPVAIVRSIEGGVCEV-LHPHKLACEMLRASGLMGPLTAASDGGQPSSCLDMMNRWHRHACVEMFPPHGYRTQGGLEATADGEEGKEARLVGSEP 1086
            + +SG +RSFV P VH S + NL+E ++ D C VDVF +++ ED V +  +  + E        TP  ++VE A+ +L P  + +HQ+QAG IPNGC                              + YWQLYK  A YRM   EE    +G +Y WV+R RLD+AW  P+PPL  F    V+ G +++P+SD F L PR+F+   F AV   Y C        S   +      G     L R      +P+ +Y  F   I R + GGVC++    +   C +L      G   A         CL+ +  +    C  +FP  G   +  ++A  D E      L+ S P
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPE-------FTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLL------GLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALLDSSP 341          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: A0A7S2B5B2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B5B2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.070e-18
Identity = 86/307 (28.01%), Postives = 127/307 (41.37%), Query Frame = 1
Query:  109 CRCAVLYSGHVRSFVQPRVHLSHKKNLLEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGILNPRS----IEYHQEQAGY-IPNGCETGCEIN-AYWQLYKMKA-VYRMMEEHEATTGLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVR---SIEGGVCEVLHPHKLACEMLRASGLMGPLTAASDGGQPSSCLDMMNRWHRHACVEMF 996
            C   V  SG +RS + P V   H    +E L  + C  ++  H+S   +    +    FE  +         T++E  +  LN         Y  + A Y +PN C +G     AY Q YK+ A ++  +   E   G  Y W+VRSR D+ W+LP PP+    PTRV+  +N++PL D F + PR+ + + F A++  Y C           P  + G   + L +     +VPF Y +    IVR          E L P  L C           L  ++   Q  SC D  N     AC   F
Sbjct:   99 CLIGVCLSGTMRSMITPSVQ-RHFMAAMEHLAGETCEFELLAHVSTGAKDAATHASNSFEANM---------TQIETTLHALNATGKLVHTTYFDDDAHYAVPNSCPSGDPPPMAYHQAYKVAACLHACVLPREKALGRRYTWLVRSRYDLGWVLPPPPVETLNPTRVHVPYNYWPLFDGFAVVPRQLSDAYFTAINTYYRCYEGSEAPVVWFPPSL-GASDMLLTKHLVEHSVPFSYVDVTTVIVRLRRKAREWCGEQLRPFLLQC-----------LFTSTAEDQARSCQDHNNLGASCACERKF 383          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.910e-16
Identity = 78/298 (26.17%), Postives = 121/298 (40.60%), Query Frame = 1
Query:  109 CRCAVLYSGHVRSFVQPRVHLSHKKNLLEQLEIDCHVDVFMHISVEDEVPRRY-------------RKGDFEDALAFTPHTPQETEVEHAVGIL----NPRSIEYHQEQAGYIPNGCETG----CE-----------INAYW-QLYKMKAVYRMMEEHEATTGLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYD--CQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSIEGGVCEVLHPHKLACEMLRASG 897
            CR AV  SG  R+F  P V  +  +NLL  LE  C VD+F+ I   D+V  R              R+   E   A  P       +  A   L       S  Y  +     P  C  G    C            + A W  L  + +   ++   E      Y WV+R+R D+++++P+PPL+      V+  ++  P+SD F + PR +  + F A  LC+   C    A    K     E +L  ALR        P   +++P++IVR+     C+ L   ++ C ++ A G
Sbjct:  476 CRVAVCMSGQWRTFAHPLVRQTFHQNLLGALETSCEVDLFLCIKPSDQVAGRRNEHFSRTTAAPSTREAILEVLRAELPDVLSRVRLVLADEPLPQSNGQTSALYPLDTGTSFPKACANGGGDCCSRSQPSAEVQSALAAAWPSLESVSSCLDLVLREERLRQQDYHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEA----PVQLHDWPLSIVRAPPDSPCQGLPQFQIPCALMTAVG 769          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 7.340e-16
Identity = 84/295 (28.47%), Postives = 116/295 (39.32%), Query Frame = 1
Query:   28 VGVVSLLSAEVAHQQAFGAEAAWGAGSCRCAVLYSGHVRSFVQPRVHLSHKKNLLEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGILNPRSIEYHQEQAGYIPNGCE-------TG----------CEINA-------------------------------------------YWQLYKMKAVYRMM------EEHEATT-------GLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDC 690
            +G +S+ S E        AE       C  AV  SG VRSFV P VHLS +++++E ++ + C VDVF++ S+ DE          E+  A T        +E  +  L+P  + +HQEQAG IPN C        TG             NA                                           YWQLY+  A YR+       +E EA T          Y W+V +R D+AW   +P L  F    V+     +P+S  F L PR F+   F AV   + C
Sbjct:   15 LGCISVASCEFNQDPTTAAEIP----PCAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDE-------DLLEEQDAETIRN-----IEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSKEPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHAC 293          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 7.950e-15
Identity = 71/268 (26.49%), Postives = 101/268 (37.69%), Query Frame = 1
Query:  109 CRCAVLYSGHVRSFVQPRVHLSHKKNLLEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGILNPRSIEYHQEQAGYIPNGCE-----------------------------TGCEINA-------------------------------YWQLYKMKAVYRMM------EEHEATT-------GLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDC 690
            C  AV  SG VRSFV P +H S +++++E ++ + C VDVF++ S+ DE             L           +E  +  L+P  + +HQEQAG IPN C                              TG  +                                 YWQLY+  A YR+       +E EA T          Y W+V +R D+AW   +P    F    V+     +P+S  F L PR F+   F AV   + C
Sbjct:   39 CAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASLGDE------------DLLVEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASKEPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHAC 294          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: A0A7S2FD05_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD05_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.900e-13
Identity = 56/181 (30.94%), Postives = 84/181 (46.41%), Query Frame = 1
Query:  109 CRCAVLYSGHVRSFVQPRVHLSHKKNLLEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGILNPRS----IEYHQEQAGY-IPNGCETGCEIN-AYWQLYKMKA-VYRMMEEHEATTGLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQF 627
            C   V  SG +RS + P V   H    +E L  + C  ++  H+S   +    +    FE  +         T++E  +  LN         Y  + A Y +PN C +G     AY Q YK+ A ++  +   E   G  Y W+VRSR D+ W+LP PP+    PTRV+  +N++PL D F
Sbjct:   99 CLIGVCLSGTMRSMITPSVQ-RHFMAAMEHLAGETCEFELLAHVSTGAKDAATHASNSFEANM---------TQIETTLHALNATGKLVHTTYFDDDAHYAVPNSCPSGDPPPMAYHQAYKVAACLHACVLPREKALGRRYTWLVRSRYDLGWVLPPPPVETLNPTRVHVPYNYWPLFDGF 269          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.910e-10
Identity = 39/133 (29.32%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  505 YKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYD--CQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSIEGGVCEVLHPHKLACEMLRASG 897
            Y WV+R+R D+++++P+PPL+      V+  ++  P+SD F + PR +  + F A  LC+   C    A    K     E +L  ALR        P   +++P++IVR+     C+ L   ++ C ++ A G
Sbjct:   21 YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEA----PVQLHDWPLSIVRAPPDSPCQGLPQFQIPCALMTAVG 149          
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Match: A0A7S0CV21_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CV21_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 3.720e-5
Identity = 48/162 (29.63%), Postives = 76/162 (46.91%), Query Frame = 1
Query:  118 AVLYSGHVRSFVQPRVHLSHKKNLLEQL-EIDCHVDVFMHISVED---------EVPRRYRK---GDFEDALAF---TPHTPQETEV--EHAVGILNPRSIEYHQEQAGYIPNGCETGCEINAYWQLYK-MKAVYRMMEEHEATTGLSYKWVVRSRLDIAWM 546
            A+LYSGHVRSFV P V  SH +N ++ L E   ++ +F  I  +D          V R   K   G+    + F   +P TP   E+  E   G  N     Y  ++   + N       +  +W  ++ +K VY++  + E T+G+ + ++VR R D  WM
Sbjct:  104 ALLYSGHVRSFVLPGVRNSHVENFIQPLIERGANITIFASIRYDDFFRGRAPFPSVNRSAAKSWFGELGARVVFETGSPETPNVPELYKERCEGWSN-----YKLQKEQSLQN-------LGRFWNTWRRVKEVYQLATKFEHTSGMRFDYIVRLRPDFLWM 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig724.18371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LCA5_ECTSI0.000e+091.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FK46_ECTSI3.190e-4031.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B5B2_9STRA1.070e-1828.01Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WLT0_9STRA1.910e-1626.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5KVJ6_9PHAE7.340e-1628.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5E2_ECTSI7.950e-1526.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FD05_9STRA9.900e-1330.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WMN0_9STRA3.910e-1029.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0CV21_9EUKA3.720e-529.63Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig724contigEcto-sp13_S_contig724:10231..13245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score91.7
Seed ortholog evalue1.3e-15
Seed eggNOG ortholog2880.D7G5E2
Model size1854
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2CY2I@1,2S1H1@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-14_005480.1
Cds size1854
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463991.5372853-CDS-Ecto-sp13_S_contig724:10230..115811681463991.5372853-CDS-Ecto-sp13_S_contig724:10230..11581Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig724 10231..11581 -
1681463991.5508275-CDS-Ecto-sp13_S_contig724:12017..121421681463991.5508275-CDS-Ecto-sp13_S_contig724:12017..12142Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig724 12018..12142 -
1681463991.5613494-CDS-Ecto-sp13_S_contig724:12550..126871681463991.5613494-CDS-Ecto-sp13_S_contig724:12550..12687Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig724 12551..12687 -
1681463991.5722167-CDS-Ecto-sp13_S_contig724:13004..132451681463991.5722167-CDS-Ecto-sp13_S_contig724:13004..13245Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig724 13005..13245 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig724.18371.1prot_Ecto-sp13_S_contig724.18371.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig724 10231..13245 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig724.18371.1

>prot_Ecto-sp13_S_contig724.18371.1 ID=prot_Ecto-sp13_S_contig724.18371.1|Name=mRNA_Ecto-sp13_S_contig724.18371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=618bp
MPLTRIRQAVGVVSLLSAEVAHQQAFGAEAAWGAGSCRCAVLYSGHVRSF
VQPRVHLSHKKNLLEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAF
TPHTPQETEVEHAVGILNPRSIEYHQEQAGYIPNGCETGCEINAYWQLYK
MKAVYRMMEEHEATTGLSYKWVVRSRLDIAWMLPMPPLSRFPPTRVYAGH
NFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRESKVPAQVEGLLR
VALRRGHGHGAVPFGYYEFPVAIVRSIEGGVCEVLHPHKLACEMLRASGL
MGPLTAASDGGQPSSCLDMMNRWHRHACVEMFPPHGYRTQGGLEATADGE
EGKEARLVGSEPGGGLELRDGGRGGGEDERRQPVPTVHRSKDGGEAPWAG
AAGGTAAAKTLSFEEATRRIEGVNGNLSDLLGAMRIHVSPTQERLEYYVA
HHYPFHQVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDTA
ATADGKENASPRGPALDRFTDEEGKREAALSSSQVYDDGEGTGGRGGDVE
DIEEHVLVLNTTADEEERLQAAVNCSLIESLHDVWVSLLDNKFEPSEEIC
RGPAGPCLHTATPKEAS*
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mRNA from alignment at Ecto-sp13_S_contig724:10231..13245-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig724.18371.1 ID=mRNA_Ecto-sp13_S_contig724.18371.1|Name=mRNA_Ecto-sp13_S_contig724.18371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3015bp|location=Sequence derived from alignment at Ecto-sp13_S_contig724:10231..13245- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCTCACTCGGATACGGCAAGCGGTCGGTGTCGTAAGTCTCCTCTC TGCTGAGGTCGCTCATCAACAAGCATTTGGTGCCGAGGCAGCGTGGGGAG CGGGGTCGTGCAGATGTGCAGTGTTGTACTCGGGGCACGTACGAAGCTTC GTACAGCCGCGGGTCCACCTTTCTCACAAGAAGAATCTGCTCGAGCAACT GGAGATCGACTGCCATGTGGATGTCTTCATGCACATATCAGGTGAACTAC ACAATCAAGGCCACGTGAAGCCATGTTAGACGACATGATGAGAAAATCGT GGTGCCGTGGCAGATACACATGCACAAACAATGTAGAATGGTCGTTTTGC AACTGTCTCCTTTTCTAGGCCCTGTCGTGAACAACAAATTTAGCCCTCGG GCCGGGTGGTAGTGGTTAGTGCCCGCTTTTGTATCCTTAGCGAGGAAGCC TTCTGGTGTTTTCCGTCCTCGAAACATGTTCTCGTGGGAGGCACAGATCT CTGACCTGTTTATCCCTTGCCATTAACCGACCGGGCGAACATGCTTGGTG AGATACAGTCGAAGACGAGGTTCCGCGCCGATATCGCAAAGGCGACTTCG AAGATGCTCTGGCCTTCACCCCTCATACTCCCCAAGAAACCGAAGTCGAG CATGCGGTGGGGATACTCAACCCACGCTCGATCGAATACCACCAGGTGCG ATGCTGTACTGTACGAAGCAAGCCAGCCAGGTATGATTCGGAACCAAGAT TGGACTCTACAGCAGTTGAAATTAATTTTTTTTTCTCGTCTCAACTATCA CCACCCAGCCAGGAAATACGATTTTTGTGAGAGAGAGGATGGGTGGGAGA CGATGCTATCACGAGCCACAAGCCATCATTTACGAGGTTGTGAAGTGCAA TCGCCCGATGAGACTGTTAATAATCAACGTATTTGTTTACGTAGTAGGAG CAATTGAACGTATGAGCTCCTCTAGCCTGGAGGGTACACATGGATTGATG TCAGCATGTTTGTCATTCAACAACGCGCTATGATGCTCGTTGTTCTATGC TCTTTTGCCGCATCAAATTCCCGACGATGCACCACATGCCTCGGACTACA TAGGAGCAAGCGGGCTATATCCCCAACGGGTGCGAGACCGGCTGCGAGAT AAACGCCTACTGGCAACTGTACAAAATGAAGGCTGTGTACCGCATGATGG AGGAGCATGAGGCCACTACTGGACTGTCGTGAGTGACATATGGCATGTTT ACATTAAACAGATGACGTGCAGAACCATCTTCAGTCGTTCTGTATCGTAT TACCTCCGGCCACTCATGTTGCGCACTCCACTTTTTTTTCAGTGTTCCTC CTTTCGGATACCGTGCACACGATGGTCAGATACGTGCCACATGGAACACA TGGAACATGTGGCTTCTGCTGCACGACTCACTCCCGGGTGGAATTTTTGC ATGGCTCCTGCATTTAGATTGCTGCAGCTGACCGGAGTTGCTTGAAAAAG CGCGTGGCATGACGCTCTTCCTTGGCTTTTGCTGCGCAGACCGCACGCAG CGGGCATGCAGCTGCGGTTGAAACCCGTAACAGACCCTCTGTTTGCCACC GCCAACAACAGCCATTGTCAGCACTTAAAATGTTTTCCGTTTCGGCCCAA TACTCTCGAACAAGGTACAAGTGGGTAGTTCGCTCCAGGCTGGACATCGC GTGGATGCTCCCGATGCCGCCGTTGAGTCGATTCCCGCCGACCCGCGTGT ACGCGGGCCACAACTTCTTCCCCCTCTCCGATCAGTTCCTGCTCTCGCCT CGGAGGTTCGCCCAGAGCATATTCGGGGCGGTCAGCCTGTGCTACGATTG CCAAGCCCTCGAGGCCCACCGTGAGTCCAAGGTGCCGGCGCAGGTGGAGG GTCTCCTGCGCGTGGCGCTGCGGCGAGGCCACGGCCACGGCGCCGTCCCG TTCGGGTACTACGAGTTCCCCGTGGCGATCGTGCGGAGCATCGAGGGCGG CGTCTGCGAGGTGTTGCACCCGCACAAGCTTGCGTGCGAGATGCTGCGGG CGTCCGGCTTGATGGGCCCCTTGACAGCGGCGTCAGACGGCGGGCAGCCA TCATCCTGCTTAGACATGATGAACCGGTGGCACCGACATGCCTGCGTGGA AATGTTCCCGCCCCACGGCTATCGTACGCAAGGCGGGCTGGAGGCAACCG CGGACGGTGAAGAAGGAAAAGAGGCCAGATTGGTCGGCAGCGAGCCCGGA GGCGGGCTGGAGCTCCGTGATGGCGGGAGGGGTGGAGGGGAGGATGAGCG ACGCCAGCCCGTTCCCACGGTTCACCGTAGCAAGGATGGAGGTGAAGCAC CATGGGCGGGTGCTGCCGGTGGCACTGCTGCTGCGAAAACCCTGTCCTTC GAAGAGGCCACCCGGCGGATCGAAGGGGTCAACGGCAACCTCAGCGATCT ACTCGGAGCGATGAGGATACACGTCTCCCCTACGCAAGAACGACTGGAGT ACTACGTGGCCCACCACTACCCTTTCCACCAGGTCAACCCCCTCCGCCGG CCCGACCGCGGGCCTCTCGATCAAATCGCAGTCATCGAGGGCTACCGCCT GTCTCAGGCAGACTTCAACCGGCTTGCCCTTTCTTTCTCGTGCTTCCTGT CGGATACCGCCGCCACCGCCGATGGGAAGGAAAACGCTTCGCCGCGAGGC CCTGCTTTGGATCGTTTCACCGACGAAGAGGGAAAAAGGGAGGCCGCATT GTCATCGTCGCAGGTTTACGATGATGGTGAGGGAACGGGCGGTAGGGGTG GTGATGTCGAGGACATCGAAGAACACGTCCTGGTGCTGAACACTACGGCT GACGAAGAGGAACGACTGCAAGCGGCCGTGAACTGCTCTTTGATAGAATC GCTGCATGACGTCTGGGTGTCGTTGCTCGACAACAAATTCGAGCCATCGG AGGAGATTTGTCGCGGACCTGCCGGGCCTTGCTTGCACACGGCAACGCCG AAAGAAGCCAGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig724:10231..13245-

>mRNA_Ecto-sp13_S_contig724.18371.1 ID=mRNA_Ecto-sp13_S_contig724.18371.1|Name=mRNA_Ecto-sp13_S_contig724.18371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1854bp|location=Sequence derived from alignment at Ecto-sp13_S_contig724:10231..13245- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCTCACTCGGATACGGCAAGCGGTCGGTGTCGTAAGTCTCCTCTC
TGCTGAGGTCGCTCATCAACAAGCATTTGGTGCCGAGGCAGCGTGGGGAG
CGGGGTCGTGCAGATGTGCAGTGTTGTACTCGGGGCACGTACGAAGCTTC
GTACAGCCGCGGGTCCACCTTTCTCACAAGAAGAATCTGCTCGAGCAACT
GGAGATCGACTGCCATGTGGATGTCTTCATGCACATATCAGTCGAAGACG
AGGTTCCGCGCCGATATCGCAAAGGCGACTTCGAAGATGCTCTGGCCTTC
ACCCCTCATACTCCCCAAGAAACCGAAGTCGAGCATGCGGTGGGGATACT
CAACCCACGCTCGATCGAATACCACCAGGAGCAAGCGGGCTATATCCCCA
ACGGGTGCGAGACCGGCTGCGAGATAAACGCCTACTGGCAACTGTACAAA
ATGAAGGCTGTGTACCGCATGATGGAGGAGCATGAGGCCACTACTGGACT
GTCGTACAAGTGGGTAGTTCGCTCCAGGCTGGACATCGCGTGGATGCTCC
CGATGCCGCCGTTGAGTCGATTCCCGCCGACCCGCGTGTACGCGGGCCAC
AACTTCTTCCCCCTCTCCGATCAGTTCCTGCTCTCGCCTCGGAGGTTCGC
CCAGAGCATATTCGGGGCGGTCAGCCTGTGCTACGATTGCCAAGCCCTCG
AGGCCCACCGTGAGTCCAAGGTGCCGGCGCAGGTGGAGGGTCTCCTGCGC
GTGGCGCTGCGGCGAGGCCACGGCCACGGCGCCGTCCCGTTCGGGTACTA
CGAGTTCCCCGTGGCGATCGTGCGGAGCATCGAGGGCGGCGTCTGCGAGG
TGTTGCACCCGCACAAGCTTGCGTGCGAGATGCTGCGGGCGTCCGGCTTG
ATGGGCCCCTTGACAGCGGCGTCAGACGGCGGGCAGCCATCATCCTGCTT
AGACATGATGAACCGGTGGCACCGACATGCCTGCGTGGAAATGTTCCCGC
CCCACGGCTATCGTACGCAAGGCGGGCTGGAGGCAACCGCGGACGGTGAA
GAAGGAAAAGAGGCCAGATTGGTCGGCAGCGAGCCCGGAGGCGGGCTGGA
GCTCCGTGATGGCGGGAGGGGTGGAGGGGAGGATGAGCGACGCCAGCCCG
TTCCCACGGTTCACCGTAGCAAGGATGGAGGTGAAGCACCATGGGCGGGT
GCTGCCGGTGGCACTGCTGCTGCGAAAACCCTGTCCTTCGAAGAGGCCAC
CCGGCGGATCGAAGGGGTCAACGGCAACCTCAGCGATCTACTCGGAGCGA
TGAGGATACACGTCTCCCCTACGCAAGAACGACTGGAGTACTACGTGGCC
CACCACTACCCTTTCCACCAGGTCAACCCCCTCCGCCGGCCCGACCGCGG
GCCTCTCGATCAAATCGCAGTCATCGAGGGCTACCGCCTGTCTCAGGCAG
ACTTCAACCGGCTTGCCCTTTCTTTCTCGTGCTTCCTGTCGGATACCGCC
GCCACCGCCGATGGGAAGGAAAACGCTTCGCCGCGAGGCCCTGCTTTGGA
TCGTTTCACCGACGAAGAGGGAAAAAGGGAGGCCGCATTGTCATCGTCGC
AGGTTTACGATGATGGTGAGGGAACGGGCGGTAGGGGTGGTGATGTCGAG
GACATCGAAGAACACGTCCTGGTGCTGAACACTACGGCTGACGAAGAGGA
ACGACTGCAAGCGGCCGTGAACTGCTCTTTGATAGAATCGCTGCATGACG
TCTGGGTGTCGTTGCTCGACAACAAATTCGAGCCATCGGAGGAGATTTGT
CGCGGACCTGCCGGGCCTTGCTTGCACACGGCAACGCCGAAAGAAGCCAG
CTAG
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