mRNA_Ecto-sp13_S_contig7205.18326.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 1.670e-114 Identity = 235/263 (89.35%), Postives = 237/263 (90.11%), Query Frame = 1
Query: 1906 ATGVGAFPRSSSGPLQGSYHANSRPGVGLPARGGGGQAGVEGVAGARAGGSRGNSPHRQAPPARMYVSDPKFSAGGAGGVXXXXXXXXGRYGYPEGGGPGRXDXXGGMIQRPPGQGMYGRHQHQQHGGGGLLVGQHQTPVKGHHIHHPHLMHHPGGSXXXXXXXXXXXXXXAMVPVPAPSMDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFDEARKLYRKAS 2694
ATGVGAFPRSSSGPLQGSY ANSRPGVGLP RGG GQAGVEGVAGARAGGSRGNSPHRQAPPARMYVSDPKFSAGGA XXXXXXXXGRYGYPEG X XX ++QRPPGQGMYGRHQHQQHGGGGLLVGQHQTPVKGHHIHHPHLMHHPGGS XXXXXXXXXXX SMDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRF EARKLYRKAS
Sbjct: 24 ATGVGAFPRSSSGPLQGSYLANSRPGVGLPTRGGTGQAGVEGVAGARAGGSRGNSPHRQAPPARMYVSDPKFSAGGA---XXXXXXXXGRYGYPEGXXXXXXXXXXXIMQRPPGQGMYGRHQHQQHGGGGLLVGQHQTPVKGHHIHHPHLMHHPGGSSGGXXXXXXXXXXXXXXXXXXXSMDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKAS 283
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: D8LN70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN70_ECTSI) HSP 1 Score: 235 bits (600), Expect = 1.230e-60 Identity = 177/245 (72.24%), Postives = 185/245 (75.51%), Query Frame = 1
Query: 1 VQYHGGVSRGGGEGDAADASGYQNSSAPFDGGRDGGEGGRRGGLGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SFPRRYDYVEYSAPMKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RELNFSDGYTAHRSTSSGDPQVTRHNVRYDPSYDGNPSGGVPFEAEGAPYGGGRVGGTGTGVRVGSRSVAGGAGAGMYDGGSHLYEQGGGRGGEEDGAPYDLG 729
++Y GG+SRGGGE AA A Y S PFDGGRDGGEGGRRGGLGVG XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX SFPRRYDYVEYS PM+FQ REL+FSDGYTAHR+TSSG PQVTRHNVRYDP+YDGNPSGGVPFE EGAPYG GR G TGTGVRVGSRSVAGGAG GMYDGGSHLYEQGG RGGEEDGAPYD+G
Sbjct: 833 LEYRGGLSRGGGEDGAAGAGDYHYGSTPFDGGRDGGEGGRRGGLGVGGSXXXXXXXXXXXXXRHAVQATXXXXXXXXXXXXXXXXXXXXXXXSFPRRYDYVEYSTPMEFQQKQQQQQRALPVAAAERAGRHMAGGSGAGAGGRELDFSDGYTAHRNTSSGGPQVTRHNVRYDPAYDGNPSGGVPFEGEGAPYGRGRGGVTGTGVRVGSRSVAGGAGGGMYDGGSHLYEQGGARGGEEDGAPYDVG 1077
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI) HSP 1 Score: 159 bits (401), Expect = 4.840e-36 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 1
Query: 2443 SMDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFDEARKLYRKAS 2694
SMDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRF EARKLYRK +
Sbjct: 36 SMDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKVT 119
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK) HSP 1 Score: 115 bits (289), Expect = 4.530e-25 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 2464 KRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFDEARKLYRK 2688
KRAELVESPTTRL FK+FYR FRAKEK SF AAK FA CF LP KVHWRLYLEIA+L++RENRF+EAR+LY+K
Sbjct: 18 KRAELVESPTTRLHFKEFYRQFRAKEKASFAAAKAFAATCFDRLPQKVHWRLYLEIAELSKRENRFEEARQLYQK 92
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.340e-22 Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 2446 MDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFDEARKLYRK 2688
MD +KRAEL ESPTTR+ FKDFYR FR KE+ SF AAK +AM CF++LP+KVHW+L+LE+ADLA+RENR EAR+LYR+
Sbjct: 939 MDAIAIKRAELAESPTTRMQFKDFYRQFRIKERLSFEAAKDYAMACFELLPLKVHWKLFLELADLAKRENRIAEARRLYRR 1019
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA) HSP 1 Score: 111 bits (277), Expect = 4.330e-21 Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 2446 MDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFDEARKLYRK 2688
MD +KRAEL ESPTTR+ FKDFYR FR KE+ SF AAK +A+ CF++LP++VHW++ LE+ADLA+RENR EAR+LYR+
Sbjct: 589 MDAMAIKRAELAESPTTRMQFKDFYRQFRIKERLSFEAAKDYAIACFELLPLRVHWKILLELADLAKRENRIAEARRLYRR 669
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 6.180e-16 Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 2464 KRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFK-------------MLPVKVHWRLYLEIADLARRENRFDEARKLYR 2685
KR+EL ESP+TRL FK+FYR FR KEK SF AA+ +A +C + LP ++HWR+YLE+ADLA+RENRF EAR+LYR
Sbjct: 322 KRSELTESPSTRLKFKEFYREFRLKEKESFEAAQKYANQCLQPEQYVGSGEANPHSLPEELHWRIYLEMADLAKRENRFTEARRLYR 408
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: A0A448YUD9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUD9_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.850e-16 Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 2449 DEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFK--MLPVKVHWRLYLEIADLARRENRFDEARKLY 2682
D KRAEL ESP TR AFK+FYR R++E+TSF AA+ FAM LP +HWR+YLE+ADLA+R NRF+EAR+LY
Sbjct: 981 DPADAKRAELTESPATRSAFKEFYRKLRSEERTSFQAAENFAMLSLSDGSLPESIHWRVYLELADLAKRSNRFEEARRLY 1060
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: B7FTG6_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTG6_PHATC) HSP 1 Score: 91.7 bits (226), Expect = 2.880e-15 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 2449 DEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFK--MLPVKVHWRLYLEIADLARRENRFDEARKLYRK 2688
D + KRAELVE+ TR+AFK+FYR FR++E+ SF A+ FA++ LPV VHWR+YLE+ADLA+R NRF EAR LY++
Sbjct: 142 DPGERKRAELVENAATRIAFKEFYRCFRSEERFSFQKAEEFALDALDNGSLPVSVHWRVYLELADLAKRSNRFVEARSLYQR 223
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Match: A0A7S1VNZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNZ6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 5.950e-15 Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 2446 MDEKQVKRAELVESPTTRLAFKDFYRAFRAKEKTSFHAAKVFAMECFK--MLPVKVHWRLYLEIADLARRENRFDEARKLYRK 2688
+D + KRAELVE TR FK+FYR FRAKE+TSF A+ FA + +P KVH+++YLE+ADLA+R NRF+EAR LYRK
Sbjct: 56 VDPAEAKRAELVEDHATRAVFKEFYRKFRAKERTSFKEAEAFAEASLQDPNIPDKVHYKIYLELADLAKRSNRFEEARGLYRK 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7205.18326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7205.18326.1 >prot_Ecto-sp13_S_contig7205.18326.1 ID=prot_Ecto-sp13_S_contig7205.18326.1|Name=mRNA_Ecto-sp13_S_contig7205.18326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=898bp VQYHGGVSRGGGEGDAADASGYQNSSAPFDGGRDGGEGGRRGGLGVGGGGback to top mRNA from alignment at Ecto-sp13_S_contig7205:358..7399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7205.18326.1 ID=mRNA_Ecto-sp13_S_contig7205.18326.1|Name=mRNA_Ecto-sp13_S_contig7205.18326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7042bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7205:358..7399- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7205:358..7399- >mRNA_Ecto-sp13_S_contig7205.18326.1 ID=mRNA_Ecto-sp13_S_contig7205.18326.1|Name=mRNA_Ecto-sp13_S_contig7205.18326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2694bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7205:358..7399- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |