prot_Ecto-sp13_S_contig7202.18323.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7202.18323.1
Unique Nameprot_Ecto-sp13_S_contig7202.18323.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length301
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7202.18323.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 1.250e-90
Identity = 156/202 (77.23%), Postives = 162/202 (80.20%), Query Frame = 0 
Query:  102 GDESALACLWRLWTPCRKKCKQDLPKAEGCPGKHEIRSCHTGDRCTLANEGIYADLTFALDFGFSPAAGGXXXXXXXXXXXXXXXXXVFQERWRSRVGDALTSAVASLLPESCGVLPGDVAISARHPDSTAADAAAAVGGDE---QLSPPSTETSVVVASVHFWKPESAMLSASDGGNLDRNGCVSVLSAPGTASDLEVLVE 300
            GD+SALACLWR+WTPCRKKCKQDLPKAEGCPGKHEIRSCHTG RCTLANEGIYADLTFALDFGFSPAAG                  +FQ+RWRSRVGDAL SAVAS+LPESCGVLPGDVAISARHPDS A  A           QL PPS E S VVASVHFWKP SAMLSASDGGNLDRNGCVSVLSAPGTASD+E LVE
Sbjct:  762 GDDSALACLWRVWTPCRKKCKQDLPKAEGCPGKHEIRSCHTGTRCTLANEGIYADLTFALDFGFSPAAG--DTPDDNDNAGAAAAAAIFQDRWRSRVGDALASAVASILPESCGVLPGDVAISARHPDSAAGTAXXXXXXXXXXXQLPPPSPEASGVVASVHFWKPGSAMLSASDGGNLDRNGCVSVLSAPGTASDIEALVE 961
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7202.18323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LN99_9PHAE1.250e-9077.23Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7202contigEcto-sp13_S_contig7202:1793..3908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7202.18323.1mRNA_Ecto-sp13_S_contig7202.18323.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7202 1793..3910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7202.18323.1 ID=prot_Ecto-sp13_S_contig7202.18323.1|Name=mRNA_Ecto-sp13_S_contig7202.18323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp
GGDKKGPDGHKRDDDDGDDGDGFGGGDTGGGGGGGTKDEPRQTRDDDDGD
DGDGFGSGGGGEGGDGGDGGSNGGGEGGGGEKNGGVTGKKRRSGDGGDAA
AGDESALACLWRLWTPCRKKCKQDLPKAEGCPGKHEIRSCHTGDRCTLAN
EGIYADLTFALDFGFSPAAGGAPDDDENAGAAAAAAAAVFQERWRSRVGD
ALTSAVASLLPESCGVLPGDVAISARHPDSTAADAAAAVGGDEQLSPPST
ETSVVVASVHFWKPESAMLSASDGGNLDRNGCVSVLSAPGTASDLEVLVE
T
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