prot_Ecto-sp13_S_contig720.18319.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig720.18319.1
Unique Nameprot_Ecto-sp13_S_contig720.18319.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: D8LGN4_ECTSI (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=D8LGN4_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.070e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV
Sbjct:    5 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 140          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A0N8BNL5_9CRUS (60S ribosomal protein L23 n=27 Tax=Eukaryota TaxID=2759 RepID=A0A0N8BNL5_9CRUS)

HSP 1 Score: 243 bits (621), Expect = 4.820e-81
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR G  GNKYR+TLGLPV AVMNC DNSGAKNLYII+VCGIKGRLNRLP+AG+GDMV+ATV+KGKP+LRKKVMPA+V+RQR+AWRRKDGVFIYFEDN GVIVN KGEMKGSAI GPV KECAD+WPRIASNAGSIV
Sbjct:    6 GRGGLTGNKYRITLGLPVGAVMNCADNSGAKNLYIIAVCGIKGRLNRLPAAGLGDMVLATVKKGKPDLRKKVMPAIVIRQRRAWRRKDGVFIYFEDNAGVIVNPKGEMKGSAITGPVGKECADIWPRIASNAGSIV 141          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: F0WHX9_9STRA (60S ribosomal protein L23 putative n=3 Tax=Oomycota TaxID=4762 RepID=F0WHX9_9STRA)

HSP 1 Score: 240 bits (613), Expect = 8.000e-80
Identity = 115/136 (84.56%), Postives = 126/136 (92.65%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR GA GNK RM LGLPVAAV NC DNSGA+NLYII+VCGIKGRLNRLP+AGVGDMV+ATV+KGKP+LRKKVMPAV++RQRK+WRR+DGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIASNAGSIV
Sbjct:    6 GRGGASGNKLRMALGLPVAAVANCADNSGARNLYIIAVCGIKGRLNRLPAAGVGDMVLATVKKGKPDLRKKVMPAVIIRQRKSWRRRDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASNAGSIV 141          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A1Y1Y5E8_9FUNG (Ribosomal protein L14b/L23e n=8 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1Y5E8_9FUNG)

HSP 1 Score: 236 bits (603), Expect = 2.590e-78
Identity = 113/136 (83.09%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR GA GNK+RM+LGLPV AV+NC DNSGAKNLYII+V GIKGRLNRLP+AGVGDMVMATV+KGKP+LRKKVMPAVV+RQRKAWRR+DGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIAS++G++V
Sbjct:    5 GRGGAAGNKFRMSLGLPVGAVINCADNSGAKNLYIIAVTGIKGRLNRLPAAGVGDMVMATVKKGKPDLRKKVMPAVVIRQRKAWRRRDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASSSGTVV 140          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: M4TPD7_9METZ (60S ribosomal protein L23 n=10 Tax=Eumetazoa TaxID=6072 RepID=M4TPD7_9METZ)

HSP 1 Score: 236 bits (603), Expect = 2.590e-78
Identity = 115/135 (85.19%), Postives = 127/135 (94.07%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 135
            GR G+ G+K+R++LGLPV AVMNC DN+GAKNLYIISV GIKGRLNR+PSAG+GD+V+ATV+KGKPELRKKVMPAVVVRQRK +RRKDGVFIYFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:    5 GRGGSSGSKFRISLGLPVGAVMNCADNTGAKNLYIISVKGIKGRLNRMPSAGIGDLVLATVKKGKPELRKKVMPAVVVRQRKPYRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A1D1YVF2_9ARAE (60S ribosomal protein L23 n=7 Tax=Eukaryota TaxID=2759 RepID=A0A1D1YVF2_9ARAE)

HSP 1 Score: 236 bits (601), Expect = 5.220e-78
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR GA GNK+RMTLGLPV A+MNC DNSGAKNLYIISV GI GRLNRLP+AGVGDMVMATV+KG+P+LRKKVMPAVV+RQRK WRRKDGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIAS++G++V
Sbjct:    5 GRGGASGNKFRMTLGLPVGAIMNCADNSGAKNLYIISVKGIHGRLNRLPAAGVGDMVMATVKKGRPDLRKKVMPAVVIRQRKPWRRKDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASSSGTVV 140          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A0L0HBL9_SPIPD (60S ribosomal protein L23 n=5 Tax=Fungi incertae sedis TaxID=112252 RepID=A0A0L0HBL9_SPIPD)

HSP 1 Score: 235 bits (599), Expect = 1.050e-77
Identity = 111/136 (81.62%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR+GA GNK+RMTLGLPV AVMNC DNSGAKNLYIISV GIKGRLNRLP+AGVGDMV+ATV+KGKP+LRKKVMPAVV+RQRK WRR+DG+++YFEDN GVIVN KGEMKGSAI GPV KECADLWP+IAS++G++V
Sbjct:    5 GRSGASGNKFRMTLGLPVGAVMNCADNSGAKNLYIISVKGIKGRLNRLPAAGVGDMVLATVKKGKPDLRKKVMPAVVIRQRKPWRRRDGIYLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPKIASSSGTVV 140          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: RL23_DANRE (60S ribosomal protein L23 n=15 Tax=Bilateria TaxID=33213 RepID=RL23_DANRE)

HSP 1 Score: 234 bits (597), Expect = 2.130e-77
Identity = 115/135 (85.19%), Postives = 126/135 (93.33%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 135
            GR G+ G K+R++LGLPV AV+NC DN+GAKNLYIISV GIKGRLNRLPSAGVGDMVMATV+KGKPELRKKV PAVV+RQRK++RRKDGVF+YFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:    5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A4D9D4M8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4M8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.120e-77
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR G  G K+R TLGLPVAAV+NC DN+GAKNL+II+V G+KGRLNRLP A +GDMVMA+VRKGKPELRKKVMPAVV+RQRKAWRRKDG+FIYFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASN+G+IV
Sbjct:    6 GRGGTTGAKFRTTLGLPVAAVINCADNTGAKNLHIIAVGGVKGRLNRLPQASLGDMVMASVRKGKPELRKKVMPAVVIRQRKAWRRKDGIFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNSGTIV 141          
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A1R0GXK9_9FUNG (60S ribosomal protein L23 n=2 Tax=Smittium TaxID=4888 RepID=A0A1R0GXK9_9FUNG)

HSP 1 Score: 238 bits (606), Expect = 3.440e-77
Identity = 114/136 (83.82%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 136
            GR G+ GNK++M+LGLPV AV+NC DNSGAKNLYII+V GIKGRLNRLPSAGVGDMVMATV+KGKPELRKKVMPAVVVRQRKAWRR+DGV++YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIASN+G++V
Sbjct:  115 GRGGSAGNKFKMSLGLPVGAVINCADNSGAKNLYIIAVTGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVMPAVVVRQRKAWRRRDGVYLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASNSGAVV 250          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGN4_ECTSI2.070e-93100.00Uncharacterized protein n=5 Tax=Eukaryota TaxID=27... [more]
A0A0N8BNL5_9CRUS4.820e-8185.2960S ribosomal protein L23 n=27 Tax=Eukaryota TaxID... [more]
F0WHX9_9STRA8.000e-8084.5660S ribosomal protein L23 putative n=3 Tax=Oomycot... [more]
A0A1Y1Y5E8_9FUNG2.590e-7883.09Ribosomal protein L14b/L23e n=8 Tax=Zoopagomycota ... [more]
M4TPD7_9METZ2.590e-7885.1960S ribosomal protein L23 n=10 Tax=Eumetazoa TaxID... [more]
A0A1D1YVF2_9ARAE5.220e-7883.0960S ribosomal protein L23 n=7 Tax=Eukaryota TaxID=... [more]
A0A0L0HBL9_SPIPD1.050e-7781.6260S ribosomal protein L23 n=5 Tax=Fungi incertae s... [more]
RL23_DANRE2.130e-7785.1960S ribosomal protein L23 n=15 Tax=Bilateria TaxID... [more]
A0A4D9D4M8_9STRA3.120e-7783.09Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1R0GXK9_9FUNG3.440e-7783.8260S ribosomal protein L23 n=2 Tax=Smittium TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 15..136
e-value: 7.7E-60
score: 214.8
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 18..136
e-value: 4.1E-36
score: 123.8
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..135
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 15..136
score: 19.138
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20coord: 1..136
e-value: 3.4E-69
score: 232.8
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 6..136
NoneNo IPR availablePANTHERPTHR11761:SF2260S RIBOSOMAL PROTEIN L23coord: 1..135
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 75..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig720contigEcto-sp13_S_contig720:10642..12850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig720.18319.1mRNA_Ecto-sp13_S_contig720.18319.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig720 10642..12850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig720.18319.1 ID=prot_Ecto-sp13_S_contig720.18319.1|Name=mRNA_Ecto-sp13_S_contig720.18319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPS
AGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGV
IVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000218Ribosomal_L14P
IPR036853Ribosomal_L14_sf
IPR019972Ribosomal_L14P_CS