mRNA_Ecto-sp13_S_contig720.18319.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig720.18319.1
Unique NamemRNA_Ecto-sp13_S_contig720.18319.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: D8LGN4_ECTSI (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=D8LGN4_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.070e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV
Sbjct:    5 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 140
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A0N8BNL5_9CRUS (60S ribosomal protein L23 n=27 Tax=Eukaryota TaxID=2759 RepID=A0A0N8BNL5_9CRUS)

HSP 1 Score: 243 bits (621), Expect = 4.820e-81
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR G  GNKYR+TLGLPV AVMNC DNSGAKNLYII+VCGIKGRLNRLP+AG+GDMV+ATV+KGKP+LRKKVMPA+V+RQR+AWRRKDGVFIYFEDN GVIVN KGEMKGSAI GPV KECAD+WPRIASNAGSIV
Sbjct:    6 GRGGLTGNKYRITLGLPVGAVMNCADNSGAKNLYIIAVCGIKGRLNRLPAAGLGDMVLATVKKGKPDLRKKVMPAIVIRQRRAWRRKDGVFIYFEDNAGVIVNPKGEMKGSAITGPVGKECADIWPRIASNAGSIV 141
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: F0WHX9_9STRA (60S ribosomal protein L23 putative n=3 Tax=Oomycota TaxID=4762 RepID=F0WHX9_9STRA)

HSP 1 Score: 240 bits (613), Expect = 8.000e-80
Identity = 115/136 (84.56%), Postives = 126/136 (92.65%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR GA GNK RM LGLPVAAV NC DNSGA+NLYII+VCGIKGRLNRLP+AGVGDMV+ATV+KGKP+LRKKVMPAV++RQRK+WRR+DGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIASNAGSIV
Sbjct:    6 GRGGASGNKLRMALGLPVAAVANCADNSGARNLYIIAVCGIKGRLNRLPAAGVGDMVLATVKKGKPDLRKKVMPAVIIRQRKSWRRRDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASNAGSIV 141
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A1Y1Y5E8_9FUNG (Ribosomal protein L14b/L23e n=8 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1Y5E8_9FUNG)

HSP 1 Score: 236 bits (603), Expect = 2.590e-78
Identity = 113/136 (83.09%), Postives = 127/136 (93.38%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR GA GNK+RM+LGLPV AV+NC DNSGAKNLYII+V GIKGRLNRLP+AGVGDMVMATV+KGKP+LRKKVMPAVV+RQRKAWRR+DGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIAS++G++V
Sbjct:    5 GRGGAAGNKFRMSLGLPVGAVINCADNSGAKNLYIIAVTGIKGRLNRLPAAGVGDMVMATVKKGKPDLRKKVMPAVVIRQRKAWRRRDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASSSGTVV 140
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: M4TPD7_9METZ (60S ribosomal protein L23 n=10 Tax=Eumetazoa TaxID=6072 RepID=M4TPD7_9METZ)

HSP 1 Score: 236 bits (603), Expect = 2.590e-78
Identity = 115/135 (85.19%), Postives = 127/135 (94.07%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 405
            GR G+ G+K+R++LGLPV AVMNC DN+GAKNLYIISV GIKGRLNR+PSAG+GD+V+ATV+KGKPELRKKVMPAVVVRQRK +RRKDGVFIYFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:    5 GRGGSSGSKFRISLGLPVGAVMNCADNTGAKNLYIISVKGIKGRLNRMPSAGIGDLVLATVKKGKPELRKKVMPAVVVRQRKPYRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A1D1YVF2_9ARAE (60S ribosomal protein L23 n=7 Tax=Eukaryota TaxID=2759 RepID=A0A1D1YVF2_9ARAE)

HSP 1 Score: 236 bits (601), Expect = 5.220e-78
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR GA GNK+RMTLGLPV A+MNC DNSGAKNLYIISV GI GRLNRLP+AGVGDMVMATV+KG+P+LRKKVMPAVV+RQRK WRRKDGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIAS++G++V
Sbjct:    5 GRGGASGNKFRMTLGLPVGAIMNCADNSGAKNLYIISVKGIHGRLNRLPAAGVGDMVMATVKKGRPDLRKKVMPAVVIRQRKPWRRKDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASSSGTVV 140
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A0L0HBL9_SPIPD (60S ribosomal protein L23 n=5 Tax=Fungi incertae sedis TaxID=112252 RepID=A0A0L0HBL9_SPIPD)

HSP 1 Score: 235 bits (599), Expect = 1.050e-77
Identity = 111/136 (81.62%), Postives = 127/136 (93.38%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR+GA GNK+RMTLGLPV AVMNC DNSGAKNLYIISV GIKGRLNRLP+AGVGDMV+ATV+KGKP+LRKKVMPAVV+RQRK WRR+DG+++YFEDN GVIVN KGEMKGSAI GPV KECADLWP+IAS++G++V
Sbjct:    5 GRSGASGNKFRMTLGLPVGAVMNCADNSGAKNLYIISVKGIKGRLNRLPAAGVGDMVLATVKKGKPDLRKKVMPAVVIRQRKPWRRRDGIYLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPKIASSSGTVV 140
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: RL23_DANRE (60S ribosomal protein L23 n=15 Tax=Bilateria TaxID=33213 RepID=RL23_DANRE)

HSP 1 Score: 234 bits (597), Expect = 2.130e-77
Identity = 115/135 (85.19%), Postives = 126/135 (93.33%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 405
            GR G+ G K+R++LGLPV AV+NC DN+GAKNLYIISV GIKGRLNRLPSAGVGDMVMATV+KGKPELRKKV PAVV+RQRK++RRKDGVF+YFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:    5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A4D9D4M8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4M8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.120e-77
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR G  G K+R TLGLPVAAV+NC DN+GAKNL+II+V G+KGRLNRLP A +GDMVMA+VRKGKPELRKKVMPAVV+RQRKAWRRKDG+FIYFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASN+G+IV
Sbjct:    6 GRGGTTGAKFRTTLGLPVAAVINCADNTGAKNLHIIAVGGVKGRLNRLPQASLGDMVMASVRKGKPELRKKVMPAVVIRQRKAWRRKDGIFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNSGTIV 141
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BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Match: A0A1R0GXK9_9FUNG (60S ribosomal protein L23 n=2 Tax=Smittium TaxID=4888 RepID=A0A1R0GXK9_9FUNG)

HSP 1 Score: 238 bits (606), Expect = 3.440e-77
Identity = 114/136 (83.82%), Postives = 127/136 (93.38%), Query Frame = 1 
Query:    1 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 408
            GR G+ GNK++M+LGLPV AV+NC DNSGAKNLYII+V GIKGRLNRLPSAGVGDMVMATV+KGKPELRKKVMPAVVVRQRKAWRR+DGV++YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIASN+G++V
Sbjct:  115 GRGGSAGNKFKMSLGLPVGAVINCADNSGAKNLYIIAVTGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVMPAVVVRQRKAWRRRDGVYLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASNSGAVV 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig720.18319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGN4_ECTSI2.070e-93100.00Uncharacterized protein n=5 Tax=Eukaryota TaxID=27... [more]
A0A0N8BNL5_9CRUS4.820e-8185.2960S ribosomal protein L23 n=27 Tax=Eukaryota TaxID... [more]
F0WHX9_9STRA8.000e-8084.5660S ribosomal protein L23 putative n=3 Tax=Oomycot... [more]
A0A1Y1Y5E8_9FUNG2.590e-7883.09Ribosomal protein L14b/L23e n=8 Tax=Zoopagomycota ... [more]
M4TPD7_9METZ2.590e-7885.1960S ribosomal protein L23 n=10 Tax=Eumetazoa TaxID... [more]
A0A1D1YVF2_9ARAE5.220e-7883.0960S ribosomal protein L23 n=7 Tax=Eukaryota TaxID=... [more]
A0A0L0HBL9_SPIPD1.050e-7781.6260S ribosomal protein L23 n=5 Tax=Fungi incertae s... [more]
RL23_DANRE2.130e-7785.1960S ribosomal protein L23 n=15 Tax=Bilateria TaxID... [more]
A0A4D9D4M8_9STRA3.120e-7783.09Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1R0GXK9_9FUNG3.440e-7783.8260S ribosomal protein L23 n=2 Tax=Smittium TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig720contigEcto-sp13_S_contig720:10642..12850 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score275.0
Seed ortholog evalue1.9e-71
Seed eggNOG ortholog2880.D8LGN4
Preferred nameRPL23
Model size411
KEGG koko:K02894
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000184,GO:0000956,GO:0001221,GO:0001223,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0006139,GO:0006355,GO:0006357,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006606,GO:0006610,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010948,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017022,GO:0017038,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019899,GO:0022411,GO:0022625,GO:0022626,GO:0023051,GO:0023056,GO:0030162,GO:0030234,GO:0030867,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032269,GO:0032984,GO:0032986,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042886,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044389,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045786,GO:0045787,GO:0045861,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070180,GO:0070727,GO:0070887,GO:0070972,GO:0071156,GO:0071157,GO:0071158,GO:0071236,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0072716,GO:0072717,GO:0080090,GO:0090068,GO:0090150,GO:0090304,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098772,GO:0098827,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901798,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903506,GO:1903507,GO:1903508,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2000112,GO:2000113,GO:2001141
Exons4
EggNOG free text desc.large ribosomal subunit rRNA binding
EggNOG OGsCOG0093@1,KOG0901@2759
Cds size411
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463986.5330505-CDS-Ecto-sp13_S_contig720:10641..107241681463986.5330505-CDS-Ecto-sp13_S_contig720:10641..10724Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig720 10642..10724 -
1681463986.5653503-CDS-Ecto-sp13_S_contig720:11353..114671681463986.5653503-CDS-Ecto-sp13_S_contig720:11353..11467Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig720 11354..11467 -
1681463986.5750146-CDS-Ecto-sp13_S_contig720:12009..120691681463986.5750146-CDS-Ecto-sp13_S_contig720:12009..12069Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig720 12010..12069 -
1681463986.6248484-CDS-Ecto-sp13_S_contig720:12696..128501681463986.6248484-CDS-Ecto-sp13_S_contig720:12696..12850Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig720 12697..12850 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig720.18319.1prot_Ecto-sp13_S_contig720.18319.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig720 10642..12850 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig720.18319.1

>prot_Ecto-sp13_S_contig720.18319.1 ID=prot_Ecto-sp13_S_contig720.18319.1|Name=mRNA_Ecto-sp13_S_contig720.18319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPS
AGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGV
IVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV*
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mRNA from alignment at Ecto-sp13_S_contig720:10642..12850-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig720.18319.1 ID=mRNA_Ecto-sp13_S_contig720.18319.1|Name=mRNA_Ecto-sp13_S_contig720.18319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig720:10642..12850- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGCGCGCCGGTGCCCAGGGCAACAAGTACCGCATGACCCTCGGTCTGCC
CGTGGCCGCGGTCATGAACTGCTGCGACAACAGCGGTGCCAAGAACCTGT
ACATCATCTCGGTGTGCGGCATCAAGGGTCGCCTGAACCGCCTGCCCTCC
GCCGGTAGGTGTAAGGGCCGCGTCGGTAGATACCACAAACTCTGCGCGCA
GCTACAAGCTGTGTACGAGTGAGCCGCCAAGGAGCAAGATGAGCATACCT
CGAGCAGCAAGTTGTCTACATCAACGCGCGACCACATCCGAGATGAAATA
GTGATTTCCAGACTCGAGCCTTGTGCGATTTTTTTTGGATGACGTGCGTA
GCTTGCCTTCGTGGATAAAACCTCCGCCACCACAAGCGTTTGGTGAAACT
GGTCCTAAGATGTAGGGAACGTTTTCGTCCCATGGTTGTTTGGTAAACAC
GTGCACCGGATACACAGTAGACGAATGCACAACGCACCCGGCTTGGTTGA
CGAAAAAGGTTGTCTCTTAGGATACTCTACTACAAGCCTCCACGTATCTG
GCGTGTCTGTTTTTCTGTTTGCAAGCATCGACCTACGCCACAACTCGATT
CACCGTGCGACGGTGTCAGTCTTGCCCACTGTATCGCTGTTGCACCGCTC
ACTGCTGTTGACGTTCGCGGCGGGCGAACCCGCCCACCCAGACACACGCA
GGCGTTGGAGGGCTCTTACTCATGTTGCCCTCTTTTTGCCCGGTTTGTTT
AACTGTTCACACTGCTGGATGACGCCTGCAGGTGTCGGTGACATGGTGAT
GGCCACTGTCCGCAAGGGAAAGCCGGAGCTCAGGAAGAAGGGTGAGAAAA
ATATTGATTTAGGCCAAGGTCGCACTCTCAAACCAAGCGTTTTACAGCAG
CGCTGGTGTGCATTTATGGTCTCGTCAGCAGTAGCTATGACGATACAAAG
TACTACTGTACACACCCAAACCAAGACCACGAACGATACGTGGATCAAAC
GTGAGCTCTTCTTTCGCACGGGAGGACCTTACCCTCTCTCTCGAACAACG
AGTGTTTTGATCAGGAAATACCTGTAATAGACGGAAACGTAAGCTACACC
GTTCCAGGTCTCGGTGCTCGCTTGCACCCAAACCATGCGATCAAGTCTGT
TCTGAAGTGTGTTTCCCTGAGGTAGCGTCACGTCAACGTTCGCCTTCTGC
GAGTGTTTCCGCAGGTGTGCTCCGCATTTTGTCGTTGTTTTTCGTACGTC
TCCGCTAACTCCCCTTTCGCTAGTAGGCACGTTTGAACGGTAGAAAGCAG
AGGTGCCCTGGCTCCCCCATCATCTAACAGGGCATGTCGTTTGACTGCCC
CCCATTGCCGTCACCCTCCCCTCCCCCCTACAGTGATGCCCGCCGTTGTG
GTGAGGCAGCGCAAGGCCTGGAGGCGGAAGGACGGTGTGTTCATCTACTT
CGAGGACAACGGCGGCGTTATTGTCAACAACAAGGGCGAGATGAAGGGTG
AGCTTGGCGTCTTTTTCGTCAGACGGCAGCGAGGCCGTTTCGCTTCAAGA
ACGGCCTAGACCTTGCCGTTGTGCGGAGACACGATTTGGAGGTTGTCAGC
CCGTTAGAGCGATGGAAGAGCAGCAGCAGCAGCAACAGCCAGCAATAGCA
GCAGTTGTGCTTGGGTTGTTTGGACTCGTTTGGCTTCGTTGCTTCGCCGT
TGCTGTGGGGTGGGGGAATGAAATAAATATTGACTGACCTTTGCCTAAGC
TAGTCGTGCTTCTGCCGTCGAGGAAATGCGCGCCGGGTTCTGTTTATTCC
CGGCTTGGGTTGTAGACGCTAGTCTTCGATGTACGAGCCCTTGTTCTTGA
AAGGCGTGTGCCATTCCTGATTTTTGCCTCCTTTTGGGCCGCTGTTATCG
CACTGGGCACAGCGTCTTCGCGCCTTGCTTGGACCTCACAGCCCTCTTGA
AGCCCGTCTAAATTACGGTTGAGCGGCATGGACAAAACAAGCTCCGCCCT
GAGAACATGGACCAAGCGCCTTTACTCATTTTGGTGAACGAGGTTTGAGT
TGTTCATGCGTTGCCCCGCACCTCACTCTTATGCTTGCCGCTCAATTTGC
TGTCACCCCTCCCGTTTTTTGTGCAGGTTCCGCGATCAACGGCCCCGTGG
CCAAGGAGTGCGCCGACCTGTGGCCCCGTATCGCCAGCAACGCTGGGTCC
ATCGTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig720:10642..12850-

>mRNA_Ecto-sp13_S_contig720.18319.1 ID=mRNA_Ecto-sp13_S_contig720.18319.1|Name=mRNA_Ecto-sp13_S_contig720.18319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=411bp|location=Sequence derived from alignment at Ecto-sp13_S_contig720:10642..12850- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGCGCGCCGGTGCCCAGGGCAACAAGTACCGCATGACCCTCGGTCTGCC
CGTGGCCGCGGTCATGAACTGCTGCGACAACAGCGGTGCCAAGAACCTGT
ACATCATCTCGGTGTGCGGCATCAAGGGTCGCCTGAACCGCCTGCCCTCC
GCCGGTGTCGGTGACATGGTGATGGCCACTGTCCGCAAGGGAAAGCCGGA
GCTCAGGAAGAAGGTGATGCCCGCCGTTGTGGTGAGGCAGCGCAAGGCCT
GGAGGCGGAAGGACGGTGTGTTCATCTACTTCGAGGACAACGGCGGCGTT
ATTGTCAACAACAAGGGCGAGATGAAGGGTTCCGCGATCAACGGCCCCGT
GGCCAAGGAGTGCGCCGACCTGTGGCCCCGTATCGCCAGCAACGCTGGGT
CCATCGTGTAG
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