mRNA_Ecto-sp13_S_contig7193.18309.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Match: A0A6H5JEJ7_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ7_9PHAE) HSP 1 Score: 400 bits (1029), Expect = 4.300e-133 Identity = 234/312 (75.00%), Postives = 240/312 (76.92%), Query Frame = 1
Query: 1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRW-------------------------------------------YNSKPLVTRIGEKIREYRLAIASGKPSIILVVLAVICALVAVILATTEVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWTETSEEAQREAPSGRLAATIAKDPAAKGTDRPQVLDEPATQSTGTQTSDSAMMPDDGSSRNSQSLGKTEETTSSPSTGNPEIE 807
KSDSMTVDEM DFKKAIADSAAQANGLEFFNFSER EKCLAALNIAD PIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR+ +K LVTRIGEKI EYRLAIASGKPSII VVLA+I VAVILATTEVN+NEPSTGLADWSEVILKIQQV+G DRVVTAVDS ETLDVLMEVLMD+RK WTETSEEAQREAPSGR AATI KDPAAKGTD PQV DEPATQST TQTS S MMPDDGSSRNSQSL KTEE TS ST NP IE
Sbjct: 135 KSDSMTVDEMIDFKKAIADSAAQANGLEFFNFSERAWEKCLAALNIADEPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRYPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDEMKKRYEAFKKQEAKLLVTRIGEKIWEYRLAIASGKPSIISVVLALIFTFVAVILATTEVNLNEPSTGLADWSEVILKIQQVKGSDRVVTAVDSGEETLDVLMEVLMDDRKMWTETSEEAQREAPSGRKAATIGKDPAAKGTDHPQVPDEPATQSTATQTSGSVMMPDDGSSRNSQSLRKTEEATSFSSTSNPAIE 446
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Match: D7FUI5_ECTSI (Sept5, septin GTPase, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI5_ECTSI) HSP 1 Score: 317 bits (812), Expect = 1.410e-100 Identity = 194/317 (61.20%), Postives = 211/317 (66.56%), Query Frame = 1
Query: 1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRW-------------------------------------------YNSKPLVTRIGEKIREYRLAIASGKPSIILVVLAVICALVAVILATTEV------NVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWTETSEEAQREAPSGRLAATIAKDPAAKGTDRPQVLDEPATQSTGTQTSDSAMMPDDGSSRNSQSLGKTEETTSSPSTGNPEI 804
KSDSMTVDEM FKKAI DSAAQANG+EFFNFSER KCL ALNIAD PIWLGERRPPPYAVISSQVDDPNG AHAPDPVRR+ +KPLV IGEKIREYR IASGKPSI+ VVLAVICA+VAVILA T+V N NEPSTGLADWSEVILKIQQ+EG DR++TA+D E L VLMEVLMD+RK WTETSEEAQ V D+PAT+S GT+TS S +PDDGSSRN+QSLG TEE TSSPSTG+PEI
Sbjct: 142 KSDSMTVDEMIGFKKAIVDSAAQANGVEFFNFSERAWGKCLGALNIADEPIWLGERRPPPYAVISSQVDDPNGNAHAPDPVRRYPWGDCHVMRPEHSDNTYLQCLLLEVGFQDMKDEMRKRYEAFKTEEAKPLVIVIGEKIREYRHPIASGKPSILFVVLAVICAIVAVILAHTQVHKGYCVNGNEPSTGLADWSEVILKIQQLEGSDRILTAIDPGEEPLYVLMEVLMDDRKIWTETSEEAQ-------------------------VPDKPATRSAGTRTSGSTTIPDDGSSRNNQSLGSTEEPTSSPSTGDPEI 433
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Match: D8LDE5_ECTSI (Sept2, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE5_ECTSI) HSP 1 Score: 277 bits (709), Expect = 4.020e-88 Identity = 159/233 (68.24%), Postives = 167/233 (71.67%), Query Frame = 1
Query: 1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRW-------------------------------------------YNSKPLVTRIGEKIREYRLAIASGKPSIILVVLAVICALVAVILATTEV---NVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWT 561
KSDSMTVDEMFDFKKAIADSAA+ANGLEFF FSER EKCLAALNIAD PIWLGERRPPPYAVISSQVDDPNG AHA DPVRR+ +KPLVTR+GEK REYRLAIASGKPS ILVVLAVI A VAVILA T+V N NEPSTGLADW E+ILKIQQVEG DR+VT VDSE ETLDVLM+VLMD RK WT
Sbjct: 190 KSDSMTVDEMFDFKKAIADSAAKANGLEFFTFSERAWEKCLAALNIADEPIWLGERRPPPYAVISSQVDDPNGNAHAHDPVRRYPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDKMRKRYEAFKKQEAKPLVTRVGEKNREYRLAIASGKPSTILVVLAVIFAFVAVILAATQVHAVNGNEPSTGLADWRELILKIQQVEGSDRIVTTVDSEEETLDVLMKVLMDNRKIWT 422
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Match: D7FUI7_ECTSI (Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI7_ECTSI) HSP 1 Score: 127 bits (318), Expect = 3.940e-30 Identity = 93/255 (36.47%), Postives = 126/255 (49.41%), Query Frame = 1
Query: 1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRWYN--------------------------SKPLVTRIGEKIREYRLAIAS--------------------GKPSIILVVLAVICALVAVILATTEVNVN-----------EPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWTETSEEAQREAP 594
KSDSMTVDEM +FK AI D AAQ + L+FF FSE +C AL D P WLGER+PPPYAVISS+VD+ + +P W K + TR ++E G+ S+++++ AV+CALVAV+LA VN P LA+W++VI KIQ++EG DR++ A DS E L +L++VLM+ K TE +AQ + P
Sbjct: 201 KSDSMTVDEMKEFKTAIVDLAAQDDQLKFFQFSETSWNECKGALGPTDPPNWLGERQPPPYAVISSKVDESHRGIRSPARRYPWGTCHVMETAHSDNTYLQCLLLEVGFQDMKKEMKTRYKAFVKEQTRPTTEVTVDAIKRLPRWVAHKVQGRGRKSVLVLISAVVCALVAVVLAHLRCGVNGTPPIEGGGMYNPPESLANWAKVIEKIQKLEGWDRILAAADSGEEHLAILIDVLMEYYKN-TELRNKAQEKHP 454
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Match: D8LDE4_ECTSI (Sept1, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE4_ECTSI) HSP 1 Score: 125 bits (315), Expect = 9.720e-30 Identity = 92/260 (35.38%), Postives = 127/260 (48.85%), Query Frame = 1
Query: 1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR--WYNSKPLVTRIGEK---------------------------------IREYRLAIASGKP--------------------SIILVVLAVICALVAVILATTEVNVN-----------EPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWTETSEEAQ 582
KSDSMTVDEM DFK I D AAQ N LEFF FS+ +CL L P WLGER+PPPYAVISS+VD+P+G +P RR W + + T + I E + + P S++ + +A +CA+VAV+LA V+ P GLADW++VI KIQ++EG +R++ AV+S E LDVL++VL+++ K E+A+
Sbjct: 191 KSDSMTVDEMKDFKTGIVDLAAQDNELEFFQFSDTSWNECLTTLGFTATPDWLGERQPPPYAVISSKVDEPHGGLIR-NPARRYPWGTCRVMETTHSDNTYLQCLLLEVGFQDMKDEMKARYKAFVKEQTRPITEVTVGVIKSLPRRASYAALNVVHEAEGRRPKSVLALTMAAVCAMVAVMLAYLLCGVSGAPPILGGGMHNPPEGLADWAKVIEKIQELEGWERILAAVNSGGEHLDVLIDVLIEDYKIKYGAEEQAR 449
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Match: A0A6H5JBY2_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBY2_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.090e-19 Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRW 252
KSDSMTVDEM DFK AI D AAQ N L+FF FSE +CL AL P WLGER+PPPYAVISS+VD+P+G +P RR+
Sbjct: 194 KSDSMTVDEMKDFKAAIVDLAAQDNELKFFQFSEMSWNECLTALGFTVTPSWLGERQPPPYAVISSKVDEPHGGLFR-NPARRY 276 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7193.18309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7193.18309.1 >prot_Ecto-sp13_S_contig7193.18309.1 ID=prot_Ecto-sp13_S_contig7193.18309.1|Name=mRNA_Ecto-sp13_S_contig7193.18309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp MTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGback to top mRNA from alignment at Ecto-sp13_S_contig7193:5122..7395- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7193.18309.1 ID=mRNA_Ecto-sp13_S_contig7193.18309.1|Name=mRNA_Ecto-sp13_S_contig7193.18309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2274bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7193:5122..7395- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7193:5122..7395- >mRNA_Ecto-sp13_S_contig7193.18309.1 ID=mRNA_Ecto-sp13_S_contig7193.18309.1|Name=mRNA_Ecto-sp13_S_contig7193.18309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=495bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7193:5122..7395- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |