prot_Ecto-sp13_S_contig719.18306.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig719.18306.1
Unique Nameprot_Ecto-sp13_S_contig719.18306.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
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BLAST of mRNA_Ecto-sp13_S_contig719.18306.1 vs. uniprot
Match: A0A6H5JVK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK6_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.030e-33
Identity = 130/190 (68.42%), Postives = 133/190 (70.00%), Query Frame = 0 
Query:   83 GGDEGDLQSVSELGXXXXXXXXXXXXXXX------AADQNPGIEALYGGEISDXXXXXXYDDDEGDLPANNDIAIYSDGDEDDGVGQVPYDEEXXXXXXXXDALGEIANGAAQLAAAAGQHIQXXXXXXXXXXRRLRGENDMTRGEEGDVEYDLALGDIANGAAELAATAAQAGQDIQDEVGGLIEQHDE 266
            GGDEGDLQSVSELG XXXXXXXXXXXXXX      AADQNPGIEALYGGEISDXXXXXX        PANNDIAIYSDGDEDDGVGQVPYDEEXXXXXXX  ALG+IANGAAQLAAAAGQHIQ XXXXXXXXX                                      QAGQD QDE+GGL+EQHDE
Sbjct:   89 GGDEGDLQSVSELGGXXXXXXXXXXXXXXXXXXXXAADQNPGIEALYGGEISDXXXXXXXXXXXXXXPANNDIAIYSDGDEDDGVGQVPYDEEXXXXXXX--ALGDIANGAAQLAAAAGQHIQNXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------QAGQDTQDELGGLVEQHDE 255
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BLAST of mRNA_Ecto-sp13_S_contig719.18306.1 vs. uniprot
Match: D8LMF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.090e-12
Identity = 84/113 (74.34%), Postives = 84/113 (74.34%), Query Frame = 0 
Query:   87 GDLQSVSELGXXXXXXXXXXXXXXXAADQNPGIEALYGGEISDXXXXXXYDDDEGDLPANNDIAIYSDGDEDDGVGQVPYDEEXXXXXXXXDALGEIANGAAQLAAAAGQHIQ 199
            GDLQSVSELGXXXXXXXXXXXXXX AADQNPGIEALYGGEISDXXXXXX                        GVGQVPYD  XXXXXXXX ALG IANGAAQLAAAAGQHIQ
Sbjct:  182 GDLQSVSELGXXXXXXXXXXXXXXSAADQNPGIEALYGGEISDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGQVPYD--XXXXXXXXXALGVIANGAAQLAAAAGQHIQ 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig719.18306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVK6_9PHAE1.030e-3368.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMF0_ECTSI1.090e-1274.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig719contigEcto-sp13_S_contig719:12578..17507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig719.18306.1mRNA_Ecto-sp13_S_contig719.18306.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig719 12578..17507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig719.18306.1 ID=prot_Ecto-sp13_S_contig719.18306.1|Name=mRNA_Ecto-sp13_S_contig719.18306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
ADLDEEPAVPVEDLSEDDDGEEDGGDGGQEDDGGGGIVEGEEDGDDDCDD
EDEEDPRQEVDLGSNDSVEEEEEEEEEEEEEEGGDEGDLQSVSELGGEEE
EEEEEDDDEGSAADQNPGIEALYGGEISDEDDDDEYDDDEGDLPANNDIA
IYSDGDEDDGVGQVPYDEEDDDEDEDDDALGEIANGAAQLAAAAGQHIQD
EADGDEEEDRRLRGENDMTRGEEGDVEYDLALGDIANGAAELAATAAQAG
QDIQDEVGGLIEQHDEDEAEDDDDDANDQKGLQQVDDGGGEEEEEEEEDE
EREPASELLVP*
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