mRNA_Ecto-sp13_S_contig7185.18303.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7185.18303.1
Unique NamemRNA_Ecto-sp13_S_contig7185.18303.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: D7FIS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS0_ECTSI)

HSP 1 Score: 749 bits (1935), Expect = 3.050e-270
Identity = 420/450 (93.33%), Postives = 429/450 (95.33%), Query Frame = 1 
Query:    1 QCLVSFMLVLSLGTLGDRQDSRKGAWRSGLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGRTILLAAMATLLPAVAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRVFGNAKVLIGEVGCCFVLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLPASSSSPSGXXXXXXXXXXXXXXXXXXXAGGAGTNPGHH-RLGKRKAPPLLGRKTSGPAFGDDKEVEFNSRGGGVDGGGGGTPVKHRRHFPGVGSGGGAFPTSWSKDDDRAXXXXXXXXVEEGGGTGRDGASFERRESEKSRPQL 1347
            QCLVSF+LVLSLGTLGDRQDS KGAWRSGLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLC+VGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDF+G+PFLLKDG TI+LAAMATLLPAVAGVCTMWQAQARLGARGLAASSVGRA FSHLLAFRVFGNAKVLIGE+GCC VLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLPASSS PS    XXXXXXXXXXXXXXX AGGAGTNPGHH RLGKRK  PLLGRKTSGPAFGDDKEVE NSRGGGV+GG GG+PVKHRRHFPGVGSGGG FPTSWSKDDDRAXXXXXXXX  EGGGTGRDG S ER ESEK+RPQL
Sbjct:   45 QCLVSFVLVLSLGTLGDRQDSTKGAWRSGLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCMVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFAGDPFLLKDGSTIILAAMATLLPAVAGVCTMWQAQARLGARGLAASSVGRAVFSHLLAFRVFGNAKVLIGEIGCCLVLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLPASSSPPSAPAPXXXXXXXXXXXXXXXSAGGAGTNPGHHHRLGKRKGTPLLGRKTSGPAFGDDKEVECNSRGGGVNGGXGGSPVKHRRHFPGVGSGGGDFPTSWSKDDDRAXXXXXXXXXXEGGGTGRDGVSSERLESEKTRPQL 494
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A6H5KAP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAP8_9PHAE)

HSP 1 Score: 741 bits (1913), Expect = 4.880e-263
Identity = 416/449 (92.65%), Postives = 419/449 (93.32%), Query Frame = 1 
Query:    1 QCLVSFMLVLSLGTLGDRQDSRKGAWRSGLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGRTILLAAMATLLPAVAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRVFGNAKVLIGEVGCCFVLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLPASSSSPSGXXXXXXXXXXXXXXXXXXXAGGAGTNPGHHRLGKRKAPPLLGRKTSGPAFGDDKEVEFNSRGGGVDGGGGGTPVKHRRHFPGVGSGGGAFPTSWSKDDDRAXXXXXXXXVEEGGGTGRDGASFERRESEKSRPQL 1347
            QCLVSFMLVLSLGTLGDRQDSRKGAWRSGLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLC+VGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDG TILLA MATLLPAVAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRVFGNAKVLIGEVGCC VLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLPASSSS   XXXXXXXXXXXXXXXXXXX       PGHHRLGKRKAPPLLGRKTSGPAFGDDKEVEFNSR GGV+G  G TPVKHRRHFPGVG GGGAFPTSWSK+DDRA        VEEGGGT RD ASFER ESE SRPQL
Sbjct:  294 QCLVSFMLVLSLGTLGDRQDSRKGAWRSGLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCVVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGSTILLAVMATLLPAVAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRVFGNAKVLIGEVGCCLVLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGHHRLGKRKAPPLLGRKTSGPAFGDDKEVEFNSREGGVNGREGATPVKHRRHFPGVGRGGGAFPTSWSKEDDRAAGDDTVAAVEEGGGTYRDEASFERHESEISRPQL 742
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A7S2XLI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLI8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.130e-9
Identity = 58/219 (26.48%), Postives = 105/219 (47.95%), Query Frame = 1 
Query:  190 SVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASL---LTAAYTRLLARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGRTILLAAMATLLPAVA------GVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRVFGNAKVLIGEVGCCFVL 819
            SV+F   V  +N CL +V  SF+ VAR+LT+ F      +   A    + +L  ++ +VGF +G   +   +   GT+ GV++SL   L + +T+ +  A     WR+TY  N NA+++ +P+ +++       F     +   G+ ++ +A  T +          G+ T+ Q +A         S   +AA   ++AF ++GN    +G +G   VL
Sbjct:  115 SVVFVGMVTFNNLCLKLVEVSFYNVARSLTIVFNVFFSRILLGATSSNNTILCLLVVIVGFLIGSNGELNFSVV-GTAAGVLSSLFVSLNSIFTKRVLPAVDDNHWRLTYYNNVNATILFLPL-IFI-------FERHIIMEAMGKQLVSSAFWTAMTVAGFFGFSIGIVTVLQIKAT-SPLSHNISGTAKAAVQSMMAFYIWGNPATAMGVIGIFTVL 323
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A0L6WIP1_9AGAR (GDP-fucose transporter 1 n=1 Tax=Termitomyces sp. J132 TaxID=1306850 RepID=A0A0L6WIP1_9AGAR)

HSP 1 Score: 67.8 bits (164), Expect = 6.880e-9
Identity = 59/199 (29.65%), Postives = 100/199 (50.25%), Query Frame = 1 
Query:  220 DNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLA---RAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGRTILLAAMATLLPA-VAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAF-RVFGNAKVLIGEV 801
             N  L  V+ASF+QVAR L LPF  V      R++P   +L+ C +  +GF +GV     +    G   GV++S +TA ++ ++    +     A  +++ TN  ++++L+P+ + VG G P     E F ++ G    L ++A+LL   V    T   + A    RG+AAS +G   F  ++   R    A +L+G +
Sbjct:   76 SNYTLKYVDASFYQVARGLVLPFTIVTSYFAFRSIPSLRILVACGVVTIGFFIGVFLDGTKVSMLGVFFGVVSSGITALHSVVIKESLKVVDGSALLLSWYTNLLSAIVLLPICLLVGEG-PGIM--EIFFVEAGALGFLMSIASLLSIKVTSPITHMVSSA---VRGVAASLLGMWLFHDIITSGRATSIATILLGSI 268
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A7S3L335_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L335_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.900e-8
Identity = 81/291 (27.84%), Postives = 139/291 (47.77%), Query Frame = 1 
Query:    1 QCLVSFMLVLSLGTLGDRQDSRKGAWRS-----GLLTEMARALPPNALLGGWNSKSLLGGGAEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAV--GSRALPPRDLLLPCV-LCLVGFSLGVQSQTPEAFADGTSMGVMASL---LTAAYTRLLARAEPREAWRVTYVTNRNASVILVP-VAVYVGMGDPNDFSGEPFLLKDGRTILLAAMATLLPAVAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRVFGNAKVLIGEVGCCFVLTGLALY 837
            QCL++ ++  + G +G+  +SRK A+++     G  + ++   PP   L  +         A+ V   S++F   + ++N CL +V  SF+ VAR+LT+ F  +   +  GS   P     L C+ + + GF LG + +   + A GT  GV++SL   L + +T+ +  A   + WR+T+  N NA ++ +P + ++        FSG+ F       +LLA     L    G+ T+ Q +A         S   +AA   +LA  ++ N    +G VG   VL G  LY
Sbjct:   69 QCLITAIICYAAGEVGE--NSRK-AYKAIDTDEGGESSISDHKPP--FLSQFPKAEFKTSTAQRVFPLSIVFVGMIASNNFCLKLVEVSFYNVARSLTIVFNVIFTNILLGSSTSPRT---LACLGIVIFGFFLGSKGEVNFSLA-GTIAGVLSSLFVSLNSIFTKKVLPAVDNDHWRLTFYNNINAMILFIPLILIFEHEQLYAAFSGKFFSGLFWSAMLLAGF---LGFSIGIVTVLQIKAT-SPLSHNISGTAKAAVQSILALYIWKNEWTFMGIVGIFTVLGGSLLY 346
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A2H3JLM7_WOLCO (TPT domain-containing protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JLM7_WOLCO)

HSP 1 Score: 62.8 bits (151), Expect = 3.510e-7
Identity = 61/218 (27.98%), Postives = 96/218 (44.04%), Query Frame = 1 
Query:  220 DNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARA---EPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGRTILLAAMATLLP-----AVAGVCTMWQAQARL---------------GARGLAASSVGRAAFSHLLAF-RVFGNAKVLIGEV 801
             N  L  V+ASF+QVAR + LPF      +   A P   +LL C +   GF +GV        A G + GV++S++TA ++ ++ +A       A  +++ TN  ++++L P+ V  G     +  G   LL       L  M+TL       A+ GV     + A L                 RG+AAS +G   F  ++   R    A +L+G V
Sbjct:   65 SNYTLKYVDASFYQVARGMVLPFTVATSYLLLHARPSLRILLACGIVTFGFFIGVFLDGTPVSAVGVTFGVVSSMITALHSVVIKKALDVVKGSALHLSWYTNLLSAILLAPILVLAG-----ELPGITRLLFGPNEAPLGEMSTLATFALGSAITGVFGFLMSIASLLSIKVTSPITHMVSSAVRGVAASLLGMWLFHDIITTGRASSIATILLGSV 277
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: V2WPC2_MONRO (TPT domain-containing protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=V2WPC2_MONRO)

HSP 1 Score: 62.4 bits (150), Expect = 5.770e-7
Identity = 37/118 (31.36%), Postives = 62/118 (52.54%), Query Frame = 1 
Query:  220 DNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARA---EPREAWRVTYVTNRNASVILVPVAVYVG 564
             N  L  V+ASF+QVAR L LPF  V   +   A P   +L  C +  +GF +GV          G   GV++S +TA ++ ++ ++       +  +++ TN  ++++L+PV V VG
Sbjct:   95 SNYTLKYVDASFYQVARGLVLPFTVVTSFIALHARPSLQILFACAIVTMGFFIGVFLDGTSISTKGIFFGVVSSAITATHSVVIKQSLNVVNGSSLLLSWYTNLLSAIVLIPVIVLVG 212
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A067P145_PLEOS (TPT domain-containing protein n=2 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067P145_PLEOS)

HSP 1 Score: 61.6 bits (148), Expect = 9.030e-7
Identity = 38/118 (32.20%), Postives = 63/118 (53.39%), Query Frame = 1 
Query:  220 DNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARAEP---REAWRVTYVTNRNASVILVPVAVYVG 564
             N  L  V+ASF+QVAR L LPF  V   V   + P   ++L C L   GF +GV          G + GV +SL+TA ++ ++ ++       A  +++ TN  ++++L+P+ + VG
Sbjct:   67 SNYTLAHVDASFYQVARGLVLPFTVVATLVFLHSTPSVRIILACSLVTAGFFVGVFLDGVRPSMVGVAFGVASSLITAVHSVVIKKSLAVVNGSALMLSWYTNLLSAIVLIPILILVG 184
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A5C3QTF4_9AGAR (TPT domain-containing protein n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QTF4_9AGAR)

HSP 1 Score: 61.2 bits (147), Expect = 1.290e-6
Identity = 37/120 (30.83%), Postives = 66/120 (55.00%), Query Frame = 1 
Query:  220 DNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARA---EPREAWRVTYVTNRNASVILVPVAVYVGMG 570
             N  L  V+ASF+QVAR L LPF  +   +   + P   +L+ C++  +GF +GV     +    G S GV +S++TA ++ ++ ++       A  +++ TN  ++++LVPV +  G G
Sbjct:   96 SNFTLQYVDASFYQVARGLVLPFTVLTSFIVLHSRPSLRILIGCLVVTMGFFVGVFLDGTQVSLKGVSFGVASSVITAIHSVVIKQSLEIVDGSALLLSWYTNALSAMVLVPVFLLAGEG 215
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BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Match: A0A0C9W9E9_9AGAM (TPT domain-containing protein n=1 Tax=Hydnomerulius pinastri MD-312 TaxID=994086 RepID=A0A0C9W9E9_9AGAM)

HSP 1 Score: 61.2 bits (147), Expect = 1.300e-6
Identity = 39/118 (33.05%), Postives = 62/118 (52.54%), Query Frame = 1 
Query:  220 DNACLGVVNASFFQVARALTLPFVTVMGAVGSRALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRLLARA---EPREAWRVTYVTNRNASVILVPVAVYVG 564
             N  L  V+ASF+QVAR L LPF      V   A P   +L  C +  +GF +GV   + EA   G S GV +S +TA ++ ++ ++       A  +++ TN  ++V+++PV    G
Sbjct:   98 SNYTLKYVDASFYQVARGLVLPFTVATSYVFLLARPSLRILFSCSIVTLGFFVGVFLDSIEASVLGISFGVASSAITAVHSVVIKKSLDVVKGSAMNLSWYTNLLSAVVIIPVIFLAG 215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7185.18303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIS0_ECTSI3.050e-27093.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAP8_9PHAE4.880e-26392.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XLI8_9STRA6.130e-926.48Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A0L6WIP1_9AGAR6.880e-929.65GDP-fucose transporter 1 n=1 Tax=Termitomyces sp. ... [more]
A0A7S3L335_9STRA2.900e-827.84Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A2H3JLM7_WOLCO3.510e-727.98TPT domain-containing protein n=1 Tax=Wolfiporia c... [more]
V2WPC2_MONRO5.770e-731.36TPT domain-containing protein n=2 Tax=Moniliophtho... [more]
A0A067P145_PLEOS9.030e-732.20TPT domain-containing protein n=2 Tax=Pleurotus os... [more]
A0A5C3QTF4_9AGAR1.290e-630.83TPT domain-containing protein n=1 Tax=Pterula grac... [more]
A0A0C9W9E9_9AGAM1.300e-633.05TPT domain-containing protein n=1 Tax=Hydnomeruliu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7185contigEcto-sp13_S_contig7185:2102..7061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score744.6
Seed ortholog evalue2.7e-212
Seed eggNOG ortholog2880.D7FIS0
Preferred nameSLC35C1
Model size1350
KEGG koko:K15279
KEGG TC2.A.7.16
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0005215,GO:0005338,GO:0005457,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006629,GO:0006810,GO:0008150,GO:0008152,GO:0008593,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0012505,GO:0015780,GO:0015783,GO:0015931,GO:0015932,GO:0016020,GO:0022857,GO:0023051,GO:0023057,GO:0030258,GO:0030259,GO:0031090,GO:0031984,GO:0036080,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045746,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0070085,GO:0071702,GO:0071704,GO:0071705,GO:0090480,GO:0098588,GO:0098791,GO:1901264,GO:1901505
Exons7
EggNOG free text desc.GDP-fucose import into Golgi lumen
EggNOG OGsKOG1442@1,KOG1442@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_003170.1
Cds size1332
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7185.18303.1prot_Ecto-sp13_S_contig7185.18303.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7185 2102..7043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463984.2740207-CDS-Ecto-sp13_S_contig7185:2101..26031681463984.2740207-CDS-Ecto-sp13_S_contig7185:2101..2603Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 2102..2603 -
1681463984.2854338-CDS-Ecto-sp13_S_contig7185:3980..41141681463984.2854338-CDS-Ecto-sp13_S_contig7185:3980..4114Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 3981..4114 -
1681463984.2942898-CDS-Ecto-sp13_S_contig7185:4453..45571681463984.2942898-CDS-Ecto-sp13_S_contig7185:4453..4557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 4454..4557 -
1681463984.3063707-CDS-Ecto-sp13_S_contig7185:5003..51321681463984.3063707-CDS-Ecto-sp13_S_contig7185:5003..5132Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 5004..5132 -
1681463984.3174992-CDS-Ecto-sp13_S_contig7185:5247..54261681463984.3174992-CDS-Ecto-sp13_S_contig7185:5247..5426Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 5248..5426 -
1681463984.3279521-CDS-Ecto-sp13_S_contig7185:6347..64691681463984.3279521-CDS-Ecto-sp13_S_contig7185:6347..6469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 6348..6469 -
1681463984.3429277-CDS-Ecto-sp13_S_contig7185:6881..70431681463984.3429277-CDS-Ecto-sp13_S_contig7185:6881..7043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7185 6882..7043 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463984.3543808-UTR-Ecto-sp13_S_contig7185:7043..70611681463984.3543808-UTR-Ecto-sp13_S_contig7185:7043..7061Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7185 7044..7061 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7185.18303.1

>prot_Ecto-sp13_S_contig7185.18303.1 ID=prot_Ecto-sp13_S_contig7185.18303.1|Name=mRNA_Ecto-sp13_S_contig7185.18303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=444bp
MLVLSLGTLGDRQDSRKGAWRSGLLTEMARALPPNALLGGWNSKSLLGGG
AEAVGLASVLFSLAVFADNACLGVVNASFFQVARALTLPFVTVMGAVGSR
ALPPRDLLLPCVLCLVGFSLGVQSQTPEAFADGTSMGVMASLLTAAYTRL
LARAEPREAWRVTYVTNRNASVILVPVAVYVGMGDPNDFSGEPFLLKDGR
TILLAAMATLLPAVAGVCTMWQAQARLGARGLAASSVGRAAFSHLLAFRV
FGNAKVLIGEVGCCFVLTGLALYASCRGGAAVAQAGNVAVPGAAREHFLP
ASSSSPSGPTPSASPPSDTASGSSPSPAGGAGTNPGHHRLGKRKAPPLLG
RKTSGPAFGDDKEVEFNSRGGGVDGGGGGTPVKHRRHFPGVGSGGGAFPT
SWSKDDDRAAGDDTVAAVEEGGGTGRDGASFERRESEKSRPQL*
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mRNA from alignment at Ecto-sp13_S_contig7185:2102..7061-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7185.18303.1 ID=mRNA_Ecto-sp13_S_contig7185.18303.1|Name=mRNA_Ecto-sp13_S_contig7185.18303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4960bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7185:2102..7061- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGTGCCTGGTGAGCTTCATGCTGGTTCTGTCGCTAGGAACCCTCGGAGA
TCGCCAGGACTCCAGGAAGGGGGCATGGCGAAGCGGGCTGCTGACCGAGA
TGGCCCGGGCCCTGCCGCCGAACGCTCTCTTGGGCGGGTGGAACTCCAAG
AGCTTGCTTGGGGGAGGGGCCGAGGCGGTGGTGAGTGCTACCTGTTTTGG
CCGGCTTCAGACGCTTTTTTGGTGCGCAAATATGTTGTTGTTGTTGTTGT
TGTTGTTGTTTTCGTTATCTTCTCCACACCGGAAAACCGTTCCGGTCTGC
GCCCAGCACCTTCTGACGACCGTACTGGTCCAGCTGTATATTTAGGTGCC
CCCCGATATTCTTCAGGCTTGTCCGCAGGCCAGTCATGTCTTGTATGTGT
GCTTTGCGCGAGATTCTGCCTGTTTTTCGTGCACCGTTAAGCTCTCGCAC
GCGTTGCAGGTGGGTGGGTGGGTGGGATGTTGCGAGAGAGGGCAGTGAGC
CCCACGCCAGCGATCGTTTCCTTCTCTTTCATCCCCAAGTGTGTTTTGTC
CGCCCCGCGTGCGTTCGTTCGTTTGAAACGCGCCGAGAAAAGGGCTTGGC
TTCGGTGCTCTTCTCCCTGGCCGTCTTTGCCGATAACGCCTGCCTGGGGG
TCGTCAACGCCTCGTTCTTCCAGGTGGCCAGGGCCCTCACCCTCCCGTTT
GTAACCGTAATGGGGTGAGCTTACAGTAGTGGGCCCTAAGTAACGCCCTT
TGAACAAACGCCGATGGCCCTGTGCCGGTGGAATTGCTGGGCACAAACTG
AATCACCAATCCATTCTGTAGATTGAATAGCGCCAGTCGATTGGCCGGGC
ACATACCAGTGTTATTGAAAGCCCCGGCTGTCTTGTATTTGCTCCGCAAA
TCATGTTTGTGACAAACCCCACGGGTTTTCCAGTTTTCTTTTCGCTGGTG
GATAATACGGCAAGTTGTGCAGATGTCTCCGTCTAGTCGCCCGAATGAGT
AAAGCTCGACATTCTCCATCCAGAGCACGGTTGCTCCCGCGAAAATTATC
GAGAGCTTTTGTTTGGGCGCTGTTCCGGTCGACCGCGTTCGTCCGACGCC
GACTCTTCCGACCCATCCCCCTTGGCCACACCAAAGACTCGGCTCTGGTT
GGCGTGTTTCCGCCAACACTCAAGCGCGTGCGCCCTGCTGGCATGGGATA
AGCCAAACCCGTGTTGAGGGAGGACCCCGAGTTCTCACTGCTGTGGGCTA
GTATGTACACGAAGCTTGTGGATGGAAGTTTGCTGTGTTGGCCGGCCAGA
AGCCGAAACAACCCCCGGAATGGCGTTTGGGTCCGACGGACGGGTTGCAA
CAACTAGGACCTAGTAGGGGGGGTGTGGTATAGCGCGTAGCCCTCTGCCG
CCGACGTCGGTGTGTTTTCTTGCCTCTCATGTGTCTTCCCCGCTCCTGCG
TTTGCGGTCGGAAGTGTTCGCTTGGTGACGCAACACAGACAGCGGTTGTT
CTTCGTATATCACGCTTGCCTTCCGGCTGTGTTCGGGTGTTGGTCATTGC
GAGTGTGTTGATTGTTATCATCCTCCGCGCTAACCGGCTATTGTGTGGTA
TCTGTCTGTCTTTCTGTCTGCCTGCCTGTTTTCAGGGCTGTTGGATCCAG
AGCGCTGCCGCCCCGGGATCTGCTGCTCCCGTGCGTGCTGTGTCTGGTGG
GATTCTCTCTGGGCGTTCAGTCGCAGACGCCGGAGGCCTTCGCTGACGGG
ACCTCGATGGGGGTCATGGCCAGCCTGCTGACGGCCGCGTACACCCGACT
TCTGGCTCGTGCGGGTGGGTGTGGGTGTGGATGGTGTTGTCTTCTTGTTG
TTGTCTTGTTGTTGTTGTTGTTGTCAACCTGCACGGACAACCGATAATCG
CCCCCTTTTTCTTTTTTGTTTCGTTCCAGAACCGAGGGAGGCGTGGCGAG
TGACGTACGTGACCAACAGAAACGCTTCGGTAATTCTCGTACCCGTGGCG
GTATACGTGGGCATGGGAGACCCTAACGATTTTTCGGGAGAGCCCTTCTT
GCTCAAAGGTGAGGAAAGACATTGGATGCTTTCTTGTAACAATGGCCAGG
AGGTTGTCGTGAGAGGTGTAAACTGAATGGAGAAAATGAAGGACCGATAT
GAGGAAAGACATTGGATGCTTTCTTGTAACAATGGCCGGGGGGTTGTCGT
GAGAGGTGTACTGATGGAGAAAATGAACGACCGATAACGGGAGAGGAGGA
GGGTCCCCGCAGTACCACTGTGGCGTATTTCTTATCCCCTGTGCCCCCTT
TTAACCCGAGTTCTGGATGGCACAGGAATATGTTAGTTTCCTTCGATGCT
TCGGTGGGGCGGGGGCAGGGGCGTGGTTGAGTGGAATTTGGTGCGGGCGG
CGGTGCTTGGAAACAATGTGGAAGAGCTCTAAACTTCGCCGTGTGCTTTT
CGCTCTGTTTTCGTGACTTCTTTTTATTTTTTCCGCGGCGTAAAAATCTT
TCAGATGGCCGCACGATTCTTTTGGCGGCGATGGCGACCTTGCTTCCCGC
AGTTGCCGGGGTTTGCACCATGTGGCAGGCGCAGGCACGGCTGGGGGCCC
GGGGATTGGTGAGATTTCTTGTTTTTCGATGCATTCAATCTGTCCTTGAT
CGGGCAGAATTCTCGAGCTCGCTTGGCGTCTTGATTGTCCCCATGTTTTG
ATTACCCCCCACACCCACCCTTTCCTCGCCATCACGTTCATTCTCTCCCC
AACCTCTCTCTTTTTCCCTTTTTTTACGGGTAGTTGGCCCGTGACCACGG
AAGGCGACCGCGTGAGTTAGACAAAGAGTAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACCACAACCACAACCACAACCACAACTACAA
CCACCACCACGACCCCTCGGTGCCCTTTGTCGGTCGGTCTGTCTCAGGCG
GCCTCTTCGGTGGGCCGCGCGGCGTTCTCGCACCTCCTAGCTTTCCGCGT
CTTTGGCAACGCCAAGGTGCTGATCGGAGAGGTCGGCTGCTGCTTCGTGC
TCACCGGGCTGGCGCTGTACGCATCGTGCAGGTGCGTCCGTGGCCGCGGG
TGCTTGATCTTCTCCCTTCGTCTATGCTGCGCCGCTGTTTTGTGTTTGTG
ACAAGAGGGAATTACCCTCGACAAGGCAGGCCTTGGGGGAGATTTTACCC
TTTTATGCGGAGGGGATCTCACATCCACATGTCGACAAGAAAGGGGGGAC
AAAAAAGCGTGTGCGCGAAGCCAGTGTTTCTTTCGCCGCGTGTTTTGTTT
TTTTTTGTCGCTGCGCGCGACGGTTGAGTGTTCCGGCACGCTCTTCTCTT
CTCCCCCGTGGCCGTCGTCGTGTGCGTCGAGGAGGTGCACTGAAGGTGTA
CTGCCGCCTCAGTTGGTGGTCGCTCGGGCCTCTCCCACTCGCTTTGCTCT
TTGCGAGTGTTGGGCACCGGGCCGTTGTCGCTCGGTAATCACAGGGGGGC
TGGCGATTTGTGGTGGGGCCGGGCCGGGCCTTGCGAGGGTTATCCTTCAT
CCCGCGCGTCCCCCGGTTTGTCGACGTGACGCTGCTCGCATCGCTGAGCC
TTTGTGGCCGTCACACGACAGTTGCACGCGCTACGGCTCATGTCTCCGTC
TGCGCTGGGTGTAGGAGAGGGTGCAAGTCGGTAACAACGAAGGCTTCTTG
CACTCTTCTTTTTCGGTGTGGCCGCGGCCTAGCAAGGGGCCTGCTTCAGG
GAGATTTTGGGAGAATTGAGGACAAGTATGCCTCGAACGCGCGTACGAAT
GCGACGTACGAAAGCTTCTCACTGTTTCCATGTGCATACGTACAACCGCC
GTTGACGCCATGGCACGCCCCATCTATGTGCCGCGGAGGTCTTCGTCCCG
TCACGTGTTTCACTGAACTAGATGGGAAGAACAGCCTTGTGACCGACTCA
TAGCTTGACCCAACACCGCCGAGTCGCCGGAGGAATTCTGGTGTGACCAT
AGTTTGCTCATTTTCTCAGCTGTGATAATAGCTTAATCGCTGGGACCGAG
GCCTAGCTATTCGAAGTCGCTCTCTATGGCCTCTTTACCGTCAGCACAAC
ATCAGATTCCCACGAGTGACCCCTGTCCACACCCCTTGTTCCTGCGGCTG
GCTTGCCGCCCTTCGCGCCTGAGATCCCCCCCTGGAGCCATGCTAGCACA
TCACCAAGTGCGAAGCGCCGGTGAGGTATTCAGCGAGTCGCTCGATCCCG
TGAACGCCTGGCGTTCTCCGTCCCGGCTTTGTAGGGATGCGAGACCAACC
GCCTGGCGACTACGGCATGCACGGCTATAAGTACATCTCGCGATAGACAT
GTCCTAGCCTGAAGCAAGCACTTTACGCAGCATTCCCCCCCGTTTTTTTT
TTATGGGCCCGCTGTCCACTTTACTGCTGTGCGCCTTGACTTTTTGCGAC
CAACCTAGAGGAGGAGCCGCCGTGGCGCAGGCCGGCAACGTGGCCGTGCC
CGGGGCGGCCCGCGAACACTTCTTGCCCGCCTCCTCCTCATCCCCGTCCG
GCCCGACCCCGTCTGCCTCGCCGCCGTCGGATACGGCTTCGGGTTCGTCG
CCGTCGCCGGCGGGAGGGGCGGGAACAAACCCCGGTCATCATCGCCTCGG
AAAGAGGAAGGCCCCTCCGTTGCTAGGCAGGAAGACGTCCGGCCCCGCGT
TTGGCGACGACAAAGAGGTGGAGTTCAACAGCCGCGGAGGCGGCGTCGAC
GGTGGCGGGGGGGGAACACCCGTCAAGCACCGGAGGCATTTCCCGGGGGT
GGGGAGCGGGGGTGGCGCCTTCCCCACGAGCTGGAGCAAGGACGACGATA
GAGCCGCTGGCGACGATACCGTGGCGGCGGTCGAAGAGGGGGGGGGTACC
GGCAGAGACGGAGCTTCATTCGAACGGCGCGAGTCCGAGAAATCTCGGCC
GCAGTTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7185:2102..7061-

>mRNA_Ecto-sp13_S_contig7185.18303.1 ID=mRNA_Ecto-sp13_S_contig7185.18303.1|Name=mRNA_Ecto-sp13_S_contig7185.18303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1332bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7185:2102..7061- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGTTCTGTCGCTAGGAACCCTCGGAGATCGCCAGGACTCCAGGAA
GGGGGCATGGCGAAGCGGGCTGCTGACCGAGATGGCCCGGGCCCTGCCGC
CGAACGCTCTCTTGGGCGGGTGGAACTCCAAGAGCTTGCTTGGGGGAGGG
GCCGAGGCGGTGGGCTTGGCTTCGGTGCTCTTCTCCCTGGCCGTCTTTGC
CGATAACGCCTGCCTGGGGGTCGTCAACGCCTCGTTCTTCCAGGTGGCCA
GGGCCCTCACCCTCCCGTTTGTAACCGTAATGGGGGCTGTTGGATCCAGA
GCGCTGCCGCCCCGGGATCTGCTGCTCCCGTGCGTGCTGTGTCTGGTGGG
ATTCTCTCTGGGCGTTCAGTCGCAGACGCCGGAGGCCTTCGCTGACGGGA
CCTCGATGGGGGTCATGGCCAGCCTGCTGACGGCCGCGTACACCCGACTT
CTGGCTCGTGCGGAACCGAGGGAGGCGTGGCGAGTGACGTACGTGACCAA
CAGAAACGCTTCGGTAATTCTCGTACCCGTGGCGGTATACGTGGGCATGG
GAGACCCTAACGATTTTTCGGGAGAGCCCTTCTTGCTCAAAGATGGCCGC
ACGATTCTTTTGGCGGCGATGGCGACCTTGCTTCCCGCAGTTGCCGGGGT
TTGCACCATGTGGCAGGCGCAGGCACGGCTGGGGGCCCGGGGATTGGCGG
CCTCTTCGGTGGGCCGCGCGGCGTTCTCGCACCTCCTAGCTTTCCGCGTC
TTTGGCAACGCCAAGGTGCTGATCGGAGAGGTCGGCTGCTGCTTCGTGCT
CACCGGGCTGGCGCTGTACGCATCGTGCAGAGGAGGAGCCGCCGTGGCGC
AGGCCGGCAACGTGGCCGTGCCCGGGGCGGCCCGCGAACACTTCTTGCCC
GCCTCCTCCTCATCCCCGTCCGGCCCGACCCCGTCTGCCTCGCCGCCGTC
GGATACGGCTTCGGGTTCGTCGCCGTCGCCGGCGGGAGGGGCGGGAACAA
ACCCCGGTCATCATCGCCTCGGAAAGAGGAAGGCCCCTCCGTTGCTAGGC
AGGAAGACGTCCGGCCCCGCGTTTGGCGACGACAAAGAGGTGGAGTTCAA
CAGCCGCGGAGGCGGCGTCGACGGTGGCGGGGGGGGAACACCCGTCAAGC
ACCGGAGGCATTTCCCGGGGGTGGGGAGCGGGGGTGGCGCCTTCCCCACG
AGCTGGAGCAAGGACGACGATAGAGCCGCTGGCGACGATACCGTGGCGGC
GGTCGAAGAGGGGGGGGGTACCGGCAGAGACGGAGCTTCATTCGAACGGC
GCGAGTCCGAGAAATCTCGGCCGCAGTTGTAG
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