prot_Ecto-sp13_S_contig7180.18297.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7180.18297.1
Unique Nameprot_Ecto-sp13_S_contig7180.18297.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7180.18297.1 vs. uniprot
Match: D7G6L1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L1_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.760e-27
Identity = 88/131 (67.18%), Postives = 90/131 (68.70%), Query Frame = 0 
Query:    4 LGRGCGRLSWPRKALRKKAEVKSAAVAARKVRA----PALTAALRSNDKNVKAPPGTKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLDSSKNDQASKDPVSASPPNKSGREEKKTRDDTTST 130
            L RG GRLSWPRKALRKK E KSA VAA+K R     PA TAA R+NDKNVKAPPGTKK                  XXXXXXXXXX       NLD SKNDQASK PVSASP NKSGREEKKTRDDTTST
Sbjct:  262 LRRGRGRLSWPRKALRKKGEAKSATVAAQKARTTKETPAPTAARRNNDKNVKAPPGTKKPAATLGQSAAKSKKILNKXXXXXXXXXXRAAPAAANLDPSKNDQASKGPVSASPSNKSGREEKKTRDDTTST 392
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BLAST of mRNA_Ecto-sp13_S_contig7180.18297.1 vs. uniprot
Match: A0A6H5JEG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEG3_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.020e-5
Identity = 42/88 (47.73%), Postives = 42/88 (47.73%), Query Frame = 0 
Query:   19 RKKAEVKSAAVAARKVRA----PALTAALRSNDKNVKAPPGTKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLDSSKNDQ 102
            RKK E KSAAVAARK R     PALTAALR NDKNVKAP GTKK                                   NLD SKNDQ
Sbjct:  251 RKKGEAKSAAVAARKARTTKETPALTAALRYNDKNVKAPFGTKKPAATLDPSAAKSKKRLNKALPGTKKSAERAAPAAANLDPSKNDQ 338
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7180.18297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6L1_ECTSI2.760e-2767.18Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JEG3_9PHAE1.020e-547.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7180contigEcto-sp13_S_contig7180:4588..7265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7180.18297.1mRNA_Ecto-sp13_S_contig7180.18297.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7180 3961..7265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7180.18297.1 ID=prot_Ecto-sp13_S_contig7180.18297.1|Name=mRNA_Ecto-sp13_S_contig7180.18297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
MRCLGRGCGRLSWPRKALRKKAEVKSAAVAARKVRAPALTAALRSNDKNV
KAPPGTKKAAATLDPSAAKSKTSLIKAAPGTKKPAERAAPAAANLDSSKN
DQASKDPVSASPPNKSGREEKKTRDDTTST
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