prot_Ecto-sp13_S_contig718.18295.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig718.18295.1
Unique Nameprot_Ecto-sp13_S_contig718.18295.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length472
Homology
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BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot
Match: A0A6H5KJM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM1_9PHAE)

HSP 1 Score: 617 bits (1591), Expect = 5.330e-218
Identity = 431/471 (91.51%), Postives = 438/471 (92.99%), Query Frame = 0 
Query:    1 MDLPSSATMGDACFSPSSGGDGKRKRNRKAKKFADYVAWEEEAPTEREEEPTEDGQHHNKRNRKGKSTATQQTPQQSSPFGATPVASSSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRAVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXEEAARMGKEQESSPAVLQPRTGTVEGQEEAKAVNAREAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVSNTTVAPCSIPPAPXXXXGGPP 471
            MD+PSS T+GDACFSP++GGDGKRKRNRKAKKFADYVAWEEEA TEREE PT+DGQHHNKRNRKGKSTATQQTP QSSPF ATPVAS SPSDTAPAT SHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGR VSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX  AAR GKEQESS AVLQPRT  VEGQEEAKAV+AREAAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXX                SGATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVS+T VAPCSIPPAPXXXXGGPP
Sbjct:    1 MDVPSSTTVGDACFSPTTGGDGKRKRNRKAKKFADYVAWEEEATTEREE-PTDDGQHHNKRNRKGKSTATQQTPNQSSPFAATPVASPSPSDTAPATDSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRGKEQESSAAVLQPRTDMVEGQEEAKAVHAREAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHTTASLTSG-----SGATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVSSTNVAPCSIPPAPXXXXGGPP 465
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BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot
Match: D7FN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN54_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.290e-137
Identity = 218/233 (93.56%), Postives = 221/233 (94.85%), Query Frame = 0 
Query:    1 MDLPSSATMGDACFSPSSGGDGKRKRNRKAKKFADYVAWEEEAPTEREEEPTEDGQHHNKRNRKGKSTATQQTPQQSSPFGATPVASSSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRAVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADP 233
            MD+PSS TMGDACFSPS+GGDGKRKRNRKAKKFADYVAWEEEA TEREEEPTEDGQHHNKRNRKGKSTATQQTP QSSPF ATPVAS SPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGR VSLGSISKRIKTSQAELTGLNERINVLK    +  P
Sbjct:    1 MDVPSSTTMGDACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATTEREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKISPVREQP 233
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJM1_9PHAE5.330e-21891.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN54_ECTSI1.290e-13793.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..227
NoneNo IPR availablePANTHERPTHR45614:SF53coord: 26..321
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 26..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig718contigEcto-sp13_S_contig718:4898..8768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig718.18295.1mRNA_Ecto-sp13_S_contig718.18295.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig718 4729..8886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig718.18295.1 ID=prot_Ecto-sp13_S_contig718.18295.1|Name=mRNA_Ecto-sp13_S_contig718.18295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=472bp
MDLPSSATMGDACFSPSSGGDGKRKRNRKAKKFADYVAWEEEAPTEREEE
PTEDGQHHNKRNRKGKSTATQQTPQQSSPFGATPVASSSPSDTAPATGSH
DTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVME
ALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRAVSL
GSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDK
SLEEDPFYSVAYKATCTAATKAAKAAAAAARATAAAQARKKAAENAVAVA
ASAAAAEATRQAEEAARMGKEQESSPAVLQPRTGTVEGQEEAKAVNAREA
AAAAAAAAAATVAAATAAAATASAATAASAAAATAAVASHTTASLTSSSG
ATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVS
NTTVAPCSIPPAPPAPPGGPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015495Myb-like_TF