prot_Ecto-sp13_S_contig7179.18293.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7179.18293.1
Unique Nameprot_Ecto-sp13_S_contig7179.18293.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7179.18293.1 vs. uniprot
Match: A0A6H5KSP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSP8_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.890e-32
Identity = 78/93 (83.87%), Postives = 80/93 (86.02%), Query Frame = 0 
Query:    1 MIHAATGWPTLDHRLMFEPTPCFSIISSGAPPSQAPSSXXXXXXXX-----RNVGDNSSGSGNGSPIASAGTQAGAAGLGQGYTGHDDEIGVI 88
            M HAATGWPTLDHRL FEPTPCFSIISSGA P QAPSSXXXXXXXX     R VG+NSS SG+GS  ASAGTQAGAAGLGQGYTGHDDEIGVI
Sbjct:    1 MTHAATGWPTLDHRLRFEPTPCFSIISSGASPFQAPSSXXXXXXXXXXXXXRKVGNNSS-SGHGSATASAGTQAGAAGLGQGYTGHDDEIGVI 92
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BLAST of mRNA_Ecto-sp13_S_contig7179.18293.1 vs. uniprot
Match: D7G0H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H1_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.610e-25
Identity = 70/89 (78.65%), Postives = 72/89 (80.90%), Query Frame = 0 
Query:    1 MIHAATGWPTLDHRLMFEPTPCFSIISSGAPPSQAPSSXXXXXXXXRNVGDNSSG-SGNGSPIASAGTQAGAAGLGQGYTGHDDEIGVI 88
            MIHAATGWPTLDHRL FEPTPCFSIISSGA P QAPSSXXXXXXXX          SG+GS  A AGTQAGAAGLGQG TG+DDEIGVI
Sbjct:    1 MIHAATGWPTLDHRLRFEPTPCFSIISSGASPFQAPSSXXXXXXXXXXXXXXXXXXSGHGSATAPAGTQAGAAGLGQGCTGYDDEIGVI 89
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7179.18293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSP8_9PHAE1.890e-3283.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0H1_ECTSI2.610e-2578.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7179contigEcto-sp13_S_contig7179:5913..7051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7179.18293.1mRNA_Ecto-sp13_S_contig7179.18293.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7179 5670..7051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7179.18293.1 ID=prot_Ecto-sp13_S_contig7179.18293.1|Name=mRNA_Ecto-sp13_S_contig7179.18293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MIHAATGWPTLDHRLMFEPTPCFSIISSGAPPSQAPSSSSRSGGGGRNVG
DNSSGSGNGSPIASAGTQAGAAGLGQGYTGHDDEIGVI
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