prot_Ecto-sp13_S_contig7178.18292.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7178.18292.1
Unique Nameprot_Ecto-sp13_S_contig7178.18292.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length705
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7178.18292.1 vs. uniprot
Match: D8LB22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB22_ECTSI)

HSP 1 Score: 1118 bits (2893), Expect = 0.000e+0
Identity = 631/704 (89.63%), Postives = 648/704 (92.05%), Query Frame = 0 
Query:    1 MTDFEKWDRFDADAAEKEIERKARAVVEEAKRVIIAEERLVLKYCLDRAARLKSEAVVSALKAKRGSRRRSATTTEATGNTEDGVLLDGTPKNVDASVARTSADEAHEILKGLRRGLELRDEVVADAEAGNFHRGTRTARECLVELSAAQNLLGKVVAVVSPDDTSDYHSSQTQGAAGATGVTCCGHGGHDXXXXXXXXXXGHTRSVDTGHVGQGCASDSGGGVRGKSDATDLPAQADGRDNDEAEEIPKALEVLRRAKSACRVAEAACLLRGGRVAQATEVLRELLFEDSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHKKNLRRQVSSEGTSAASAACADESHQTPAAAGDTDAAPQKAAIHHGSPTSVSSRVGCGGNVGDQGSLAGTGDVGVETPAPAEDGAVFTAEAMEDPVVAAETPEEEGNPGVAPTAAASCSAGRSRAAARCVNDDGGNVAEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEELDKATAAGLGMHAAVARQDKGGESGAGERHSEKAGCGDGCEGLDGKSEDASSGSQVRATSKCGGERSKGGNAATVVQNMRVGCHLNIAASFLLRKTDFESAVIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVSASVRDDHRCRERREVLAGELAEVVKRLEHARWTKVHVGNGKDELPRV 704
            MTDFEKWDRFDADAAEKEIERKA  VVEEAKRVIIAEE+LVLKYC DRAARLKSEAVVSALKAKRGSRRRSATTTEATGNTEDGV LDG PKNV A VARTSADEAH ILKGLRRGLELRDE+VADAEAGNFHRGTRTARECLVELSAAQ LLGKVVAVVSP DT D H S TQGAAGATG TCCGHGGHDXXXXXXXXXX    SVDTGHVGQGCASDSGGGVRGKS AT +PAQADGR+NDE EEIPKALEVLRRAK+ACRVAEAACLLRGGRVAQ+TEVLRELLFEDSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHK+NLR  VSS+GTSAASAACADESHQTPAAAGDTDAAPQK  IHHGSPT++SSRVGCGGNVGDQGSLA  GDVGVETPAPAEDGA+FT EA EDP VAAETP+EEGNPGVAPTAAA       RAAAR VNDDGG+V EDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLE LDKATAAGLGMHAAVARQDKGGES AG+  SEKAGCGDGCEGLDGKSE+ASSGSQVRATSKCGGER KGG+A TVV+NMRVGCHLNIAASFLLRKTD ESA IHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASV ASVRD HR  E  E LAGELAEVVKRLEHARWTKVHVGNG DELPRV
Sbjct:    1 MTDFEKWDRFDADAAEKEIERKA--VVEEAKRVIIAEEQLVLKYCQDRAARLKSEAVVSALKAKRGSRRRSATTTEATGNTEDGVSLDGAPKNVGALVARTSADEAHAILKGLRRGLELRDEIVADAEAGNFHRGTRTARECLVELSAAQKLLGKVVAVVSPGDTGDNHGSATQGAAGATGGTCCGHGGHDXXXXXXXXXX--XXSVDTGHVGQGCASDSGGGVRGKSAATGVPAQADGRENDEPEEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFEDSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHKQNLRH-VSSKGTSAASAACADESHQTPAAAGDTDAAPQKMTIHHGSPTNLSSRVGCGGNVGDQGSLAVAGDVGVETPAPAEDGAIFTTEATEDPAVAAETPDEEGNPGVAPTAAAXXXXXXDRAAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEALDKATAAGLGMHAAVARQDKGGESAAGQSPSEKAGCGDGCEGLDGKSEEASSGSQVRATSKCGGERGKGGHAVTVVRNMRVGCHLNIAASFLLRKTDLESAAIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVLASVRDGHRRGEGSEALAGELAEVVKRLEHARWTKVHVGNGNDELPRV 699
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7178.18292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB22_ECTSI0.000e+089.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 224..370
e-value: 2.1E-6
score: 29.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 565..684
e-value: 2.3E-15
score: 58.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 259..652
IPR039663AIP/AIPL1PANTHERPTHR11242ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATEDcoord: 586..655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7178contigEcto-sp13_S_contig7178:1450..6782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7178.18292.1mRNA_Ecto-sp13_S_contig7178.18292.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7178 1450..7238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7178.18292.1 ID=prot_Ecto-sp13_S_contig7178.18292.1|Name=mRNA_Ecto-sp13_S_contig7178.18292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=705bp
MTDFEKWDRFDADAAEKEIERKARAVVEEAKRVIIAEERLVLKYCLDRAA
RLKSEAVVSALKAKRGSRRRSATTTEATGNTEDGVLLDGTPKNVDASVAR
TSADEAHEILKGLRRGLELRDEVVADAEAGNFHRGTRTARECLVELSAAQ
NLLGKVVAVVSPDDTSDYHSSQTQGAAGATGVTCCGHGGHDHAHAHAHAH
HGHTRSVDTGHVGQGCASDSGGGVRGKSDATDLPAQADGRDNDEAEEIPK
ALEVLRRAKSACRVAEAACLLRGGRVAQATEVLRELLFEDSKSVAAWVAR
GESFLAMNAPLLAGLHFDRALELDKGCVAAATHKKNLRRQVSSEGTSAAS
AACADESHQTPAAAGDTDAAPQKAAIHHGSPTSVSSRVGCGGNVGDQGSL
AGTGDVGVETPAPAEDGAVFTAEAMEDPVVAAETPEEEGNPGVAPTAAAS
CSAGRSRAAARCVNDDGGNVAEDVRRFVAAACEDYRAGVVLHQEGFLSSS
RQRFLRVLEELDKATAAGLGMHAAVARQDKGGESGAGERHSEKAGCGDGC
EGLDGKSEDASSGSQVRATSKCGGERSKGGNAATVVQNMRVGCHLNIAAS
FLLRKTDFESAVIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLE
AAEASVSASVRDDHRCRERREVLAGELAEVVKRLEHARWTKVHVGNGKDE
LPRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039663AIP/AIPL1