mRNA_Ecto-sp13_S_contig7177.18290.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: D8LNI3_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNI3_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 8.480e-167 Identity = 271/296 (91.55%), Postives = 274/296 (92.57%), Query Frame = 1
Query: 1 VDVPEGAGMSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPT---ENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
VDVPEGAGMSKIRVNVKHDIHGMFQVQSADMMQEV PTD AAPAAAPMDVDGENATGEKAAAPEANGSASPT ENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSAWSKSEIDRAVE+EAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKF SSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQK IDGYMKFANSSDEAY HIEAEEKAKARDCAKKAEKWLFQKLDQQANVP SK+P+
Sbjct: 486 VDVPEGAGMSKIRVNVKHDIHGMFQVQSADMMQEVXXXXXXX--XXXXXPTDAAAPAAAPMDVDGENATGEKAAAPEANGSASPTSPTENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSAWSKSEIDRAVEMEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFGSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKAIDGYMKFANSSDEAYAHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPQSKNPI 779
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A836CK58_9STRA (Heat shock protein 70 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK58_9STRA) HSP 1 Score: 197 bits (502), Expect = 5.470e-54 Identity = 125/298 (41.95%), Postives = 177/298 (59.40%), Query Frame = 1
Query: 1 VDVPEG-AGMS---KIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLV--GSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDP 876
+D+P+ G+S +R+NV+HD++G+ Q+QSA +M+EV +AP PA A M+V+G+ EA G KK + V L +D+ T+AW ++++ AVE EA MANQDRV+KET++KRNELE+Y+Y+MRD++ G L + EA S++L AE+WLYSDEGFDSTKSVYA KLK+L LG P+E+R YE+ NR A EL+ D Y +FANS DE H+ ++K K R A+KAE+WLF +Q +P ++DP
Sbjct: 485 IDIPQQFKGVSPPCSVRINVRHDLNGIIQLQSAQLMEEVAEAP---PAAXXXXXXXXXXXXXA-MEVEGKEG--------EAKGEGKXXXXXXXXXXXXXXXXXXXXXKKKFKPVTLAVDAATAAWKINQVNAAVEAEASMANQDRVVKETSNKRNELEAYIYSMRDRIGSGGDLAPFTAPAEAASMSTALEQAEEWLYSDEGFDSTKSVYAGKLKDLQALGGPLEARLYESQNRDAATAELRLAADVYKRFANSQDETTAHVSDDDKDKVRANARKAEEWLFDMQAKQGALPATQDP 770
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: F0XY57_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY57_AURAN) HSP 1 Score: 190 bits (482), Expect = 3.720e-51 Identity = 118/297 (39.73%), Postives = 171/297 (57.58%), Query Frame = 1
Query: 28 SKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTEN-GGAPAAVAEAKGDEAP------------KKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
S++RVNV H +HG + SA + VV+ P+ PAK+ ++ D A DGE A E +P E+ G A + AK D AP KK+ Y K PL++ + SK+++D A+E+EAQMANQDRV++ET D RNELE+Y+Y MRD ++G LR ++ + F +++ AE+WLY +G+D+TKS YAA+LK+L LG+P+++RF +R A + LQ I+ FANSSDE + H++ E+A RD A KA WL LD+Q + DP
Sbjct: 521 SRVRVNVAHSVHGTVAISSAQL---VVEVPDDEPAKKDDEKKDDAK-------ADGE-------AKSEXXXXXAPAESKDGEAKAESPAKADAAPAGDXXXXXAPTKKKRKYKKTPLEVAATLPKMSKAQLDAALELEAQMANQDRVIQETNDMRNELEAYIYKMRDDVIGDLRPFVADDAKAAFEAAIGGAEEWLYEGDGYDATKSQYAARLKDLHALGSPIQARFKAHEDRPAAVSALQTKIEDLKTFANSSDECFAHVDDSERATVRDAATKAGDWLMDMLDKQGKLEQHDDPA 800
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A5D6YDW0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDW0_9STRA) HSP 1 Score: 189 bits (480), Expect = 4.270e-51 Identity = 120/290 (41.38%), Postives = 165/290 (56.90%), Query Frame = 1
Query: 13 EGAGMSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTENGGAPAAVAEAKGDEA-PKKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
+GA + KIRVNV+ D++G+F V S+ +MQE+ K+ EKP A +D D E A AAA + D+A PKKK + KV LK+ + S ++++ A E E +MA+QDR+++ET +KRNELES+VY MR+ + L ++ +E L AAEDWLYSDEGFDSTKSVY AKL EL L +PVE R E+ R A ELQ +++ Y + AN+ DEAY H EEK K R AE WLF +L +Q+ + P++ P
Sbjct: 505 KGAELPKIRVNVQQDVNGVFSVASSQLMQEI---------KDEEKP--------ATVDSDAEAAKESDAAAAD----------------------DKAEPKKKRFRKVELKVQAAVGGLSTADVNAATEQELKMAHQDRIIEETFNKRNELESFVYEMRNHVSDKLAGFVTSDERSALEDKLNAAEDWLYSDEGFDSTKSVYQAKLDELRQLTSPVEFRLSESTERGVATAELQAMLEEYKRMANAGDEAYAHWTQEEKEKLRKTCIDAESWLFDELAKQSELSPTQSPA 755
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A2P4X2Z8_9STRA (Heat shock protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X2Z8_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.280e-48 Identity = 111/288 (38.54%), Postives = 154/288 (53.47%), Query Frame = 1
Query: 16 GAGMSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
GA + KIRVNV+ D++G+F V S+ +MQE+ KE EKPT+ A G++ P E PKKK + K+ L + ++ S +++ A E E +MA QDRV++ET +KRNELES+VY MR+++ L +I +E + L EDWLY+DEGFDSTKSVY KL ++ L +PVE R E+ R A EL V++ Y + NS D+AY H EEK K R AE WLF L +QA++ P+ PV
Sbjct: 70 GAEIPKIRVNVQQDMNGLFSVSSSQLMQEI---------KEEEKPTE---------------AEGDEKXXXXXXXXDKPVE----------------PKKKRFRKIELTVQAQVGGLSVADVSTATEQELKMAQQDRVIEETFNKRNELESFVYEMRNQITDKLAGFITSDEKSNLETKLMETEDWLYTDEGFDSTKSVYQQKLDDMRKLSSPVEFRLTESTERGVAQAELTAVLEEYKRMVNSGDDAYSHWTEEEKTKLRQTCVDAETWLFDGLTKQADLGPTDAPV 317
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A2D5MSP3_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSP3_9BACT) HSP 1 Score: 180 bits (457), Expect = 7.800e-48 Identity = 126/296 (42.57%), Postives = 167/296 (56.42%), Query Frame = 1
Query: 1 VDVPEGAGMSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSA-WSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKL--VGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
+D P+ + +KIRVNVK DI G+ + SA ++E+ PA+E+ K +D A A A +G+ +K P E AE K EAPKKK Y K L + T+ +SK +D A E+EA+M N DRV +ET+ RNELESY+Y MRDK+ G+L+ Y EE F SL AEDWLYSD+GFDSTKSVYA KL E+ G+P+ R YEA +RQ A + ++ Y F SSDE Y HI +E+ R AE WL+ +++Q NV S DPV
Sbjct: 483 IDAPKVSDATKIRVNVKQDISGVITLSSAQSVEEL-------PAEEA-KESDNAKEADAGEAKEGDMEVDKK-----------PEEE------TAEVK--EAPKKK-YKKTNLSFTTHTAMRYSKDAMDSASEVEARMGNADRVARETSAMRNELESYLYDMRDKIGDYGTLKDYATPEELLSFPKSLELAEDWLYSDDGFDSTKSVYADKLSEVRKKGDPIVKREYEAGHRQQAVDTFKGALETYKSFVQSSDEGYAHITDDERDTCRKAIASAEDWLYDMIEKQGNVAQSSDPV 750
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A3R7WRG5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WRG5_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.510e-47 Identity = 111/289 (38.41%), Postives = 152/289 (52.60%), Query Frame = 1
Query: 13 EGAGMSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
E ++RVNV+ DIHG+F+V S MM E+ KE E PKKK + KV LK++S+ + + ++++RA E E MA QDRV++ETA+KRNELE++VY R+ L ++ + D F + L EDWLYSDEGFDSTKSV+ KL EL L PV+ R+ + +R A EL+ VI+ Y K ANS+D+AY H +E K RD + KAE WLF +L+ QANVP ++DPV
Sbjct: 181 ENGEAPRVRVNVRQDIHGLFEVASGQMMVEI---------KEEETXXXXXXXXXXXXXX--------------------------------------GPKKKRFRKVDLKVESQVNGLTAADVNRASEEELTMAQQDRVIEETANKRNELETFVYDNRNHLSDKYSEFVSTSDRDAFDAKLNDMEDWLYSDEGFDSTKSVFQTKLDELRALLKPVDVRYQDHQDRPEAQAELKAVIEEYKKLANSTDDAYSHWTDDESNKLRDVSTKAETWLFDQLNAQANVPLTQDPV 422
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A7S2QV80_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QV80_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.330e-46 Identity = 116/294 (39.46%), Postives = 161/294 (54.76%), Query Frame = 1
Query: 1 VDVPEGAGMSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAAPMDVDGENATGEKAAAPEANGSASPTENGGAPAAVAEAKGDEAPKKKVYTKVPLKIDSKT-SAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
+D P+ A KIRVN+K D+ G+ + SA ++E+ + E KE+EK + +GE GE A APKKK Y K L + T SK +++ VE+EA+MAN DR+ KETA RNELESY+Y+MRDK++G L+ Y EA FS +L + EDWLYSDEGFD+TKSVY+ KL E+ G P+E R EA+ RQ + + ++ Y F S+DE Y HI +EK R +AE WL+ +++QA+V + DPV
Sbjct: 495 IDAPQSADPVKIRVNIKQDVSGIITLSSAQAVEEIPQEEEEV--KEAEKEGE-----------EGETKEGE--------------------AXXXXXXXXXAPKKK-YKKTLLNFVTDTFMTLSKQDMNETVELEARMANADRIAKETAAMRNELESYLYSMRDKMIGELKDYATESEATTFSKALESTEDWLYSDEGFDTTKSVYSDKLNEVKKFGAPIEKREVEASTRQKSINSFKGSLELYKGFVQSNDEKYAHIGDDEKDTCRAAISEAETWLYDMIEKQASVAQNVDPV 754
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A024U593_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U593_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.020e-45 Identity = 94/188 (50.00%), Postives = 124/188 (65.96%), Query Frame = 1
Query: 316 KVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
K + KV LK++S+ + S SE+ RA E E MA QDRV++ETA+KRNELE++VY MR+ L ++ + + F + L EDWLYSDEGFDSTKSVY AKL EL + P+++R+ E NR A +LQ +I+ Y K ANS+DE Y H E+ AK RD A AE WLF +L+ QANVP + PV
Sbjct: 558 KRFRKVELKVESQVNGLSSSEVTRASEDELAMAQQDRVIEETANKRNELETFVYDMRNHLGEKYSEFVSTADRESFEAKLNDMEDWLYSDEGFDSTKSVYQAKLDELRVVSKPIDARYQEHQNRPDAQAKLQALIEEYKKLANSTDEKYSHWTDEDSAKVRDAATNAETWLFDQLNAQANVPLTAAPV 745
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Match: A0A8K1C8P5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8P5_PYTOL) HSP 1 Score: 174 bits (440), Expect = 2.430e-45 Identity = 93/191 (48.69%), Postives = 123/191 (64.40%), Query Frame = 1
Query: 307 PKKKVYTKVPLKIDSKTSAWSKSEIDRAVEIEAQMANQDRVLKETADKRNELESYVYAMRDKLVGSLRTYIEGEEADKFSSSLTAAEDWLYSDEGFDSTKSVYAAKLKELMDLGNPVESRFYEANNRQGAATELQKVIDGYMKFANSSDEAYVHIEAEEKAKARDCAKKAEKWLFQKLDQQANVPPSKDPV 879
PKKK + KV LK+D+ + +E+ A E E MA+QDRV++ET +KRNELES+VY MR+++ L +I E + LT EDWLYSDEGFDSTKSVY KL EL L +PVE R E+ R A +ELQ V++ Y + ANS++E Y H EE+ K R A AE WLF++L +Q N+ P+ PV
Sbjct: 721 PKKKRFRKVELKVDADVPGLTNTEVTAATEQEVAMAHQDRVIEETFNKRNELESFVYDMRNQVSDRLAEFISESERNTLEDQLTVVEDWLYSDEGFDSTKSVYQGKLDELRKLSSPVEFRLSESTERATATSELQSVLEDYKRMANSTEELYAHWTPEEREKLRKAATDAEAWLFEELSKQGNLKPTDTPV 911 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7177.18290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7177.18290.1 >prot_Ecto-sp13_S_contig7177.18290.1 ID=prot_Ecto-sp13_S_contig7177.18290.1|Name=mRNA_Ecto-sp13_S_contig7177.18290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp MSKIRVNVKHDIHGMFQVQSADMMQEVVKAPEPAPAKESEKPTDTAAPAAback to top mRNA from alignment at Ecto-sp13_S_contig7177:477..6387- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7177.18290.1 ID=mRNA_Ecto-sp13_S_contig7177.18290.1|Name=mRNA_Ecto-sp13_S_contig7177.18290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5911bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7177:477..6387- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7177:477..6387- >mRNA_Ecto-sp13_S_contig7177.18290.1 ID=mRNA_Ecto-sp13_S_contig7177.18290.1|Name=mRNA_Ecto-sp13_S_contig7177.18290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=855bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7177:477..6387- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |