prot_Ecto-sp13_S_contig717.18283.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig717.18283.1
Unique Nameprot_Ecto-sp13_S_contig717.18283.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length232
Homology
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BLAST of mRNA_Ecto-sp13_S_contig717.18283.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 9.560e-72
Identity = 128/145 (88.28%), Postives = 129/145 (88.97%), Query Frame = 0 
Query:    3 RGGRAASGSRRRVSEAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAQVVSVAPAASPAA-------ILNFAGHVPGVGSRSSTRCSPLDFLEAPTVVTPESQTAS 140
            RG  AASGSRRRVSEAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAQVVSVAPAA  A        I    GHVPGVGSRSSTRCSPLDFLEAPTVVTP+SQTAS
Sbjct:  717 RGNPAASGSRRRVSEAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAQVVSVAPAADAAHPSCDSPNISRRXGHVPGVGSRSSTRCSPLDFLEAPTVVTPKSQTAS 861
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BLAST of mRNA_Ecto-sp13_S_contig717.18283.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 7.670e-46
Identity = 80/82 (97.56%), Postives = 82/82 (100.00%), Query Frame = 0 
Query:   12 RRRVSEAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAQVVSV 93
            RRRVS+AGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKA+VVSV
Sbjct:  573 RRRVSDAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAEVVSV 654
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig717.18283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG36_9PHAE9.560e-7288.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU3_ECTSI7.670e-4697.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig717contigEcto-sp13_S_contig717:18457..19643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig717.18283.1mRNA_Ecto-sp13_S_contig717.18283.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig717 18456..19643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig717.18283.1 ID=prot_Ecto-sp13_S_contig717.18283.1|Name=mRNA_Ecto-sp13_S_contig717.18283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
GSRGGRAASGSRRRVSEAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCV
ADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAQVVSVAPAASPA
AILNFAGHVPGVGSRSSTRCSPLDFLEAPTVVTPESQTASGGGSSSSSSR
ESAAVAAAEGLAVLAAAGEAATAAAEAAVGNARRGGEEEGDASRRSGVAG
GPPAVGSGESSSAVASKDGGSAVAPLEGKGNG
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