prot_Ecto-sp13_S_contig7166.18278.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7166.18278.1
Unique Nameprot_Ecto-sp13_S_contig7166.18278.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.280e-41
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWL 78
            MAD DRGALKA FRSTGGVRWKRKDNWD AA LHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWL
Sbjct:    1 MADTDRGALKALFRSTGGVRWKRKDNWDTAADLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWL 78          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.420e-20
Identity = 46/78 (58.97%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWL 78
            MA  DR AL A F STGG  W R+DNW+  A    ATW GV+VN QGRV+ + L  NNLQGP+P ELGALA+L  L L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADR--ATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASLCL 76          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.540e-19
Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWL 78
            ++ MDR AL A FRST G  WK   NW+  AGL  ATW GV+VNH GRV+ LSL  NNL GP+P  LGAL+ELK+L++
Sbjct:   39 VSSMDRAALVALFRSTDGANWKTNSNWNTDAGL--ATWEGVKVNHAGRVVGLSLPNNNLHGPIPEALGALSELKKLFM 114          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 7.050e-19
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELW 77
            M+  DR AL A FRSTGG  W R+DNWD  A L  ATW GV VN QGRV+ LSL +NNLQGP+P++LG L+ L  L+
Sbjct:   19 MSSTDREALIALFRSTGGAGWWRRDNWDTDAVL--ATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTALY 93          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.290e-18
Identity = 44/76 (57.89%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKEL 76
            M+ MDR AL A FRST G  WK   NWD  A L  ATW GVEVN +GRV++L L  NNL GP+P  LG L EL  L
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAEL--ATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHL 74          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.370e-18
Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKEL 76
            MA  DR AL A FRSTGG  W +KDNWD AA   +ATW GV+VN +GRV+KL L  NNL+GP+P +LG L+ L+ L
Sbjct:    1 MALTDRDALVALFRSTGGASWDKKDNWDTAA--EIATWSGVQVNDEGRVVKLRLKSNNLRGPIPPQLGNLSFLESL 74          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.500e-18
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKEL 76
            MA  DR AL A FRSTGG  W+++ NWD  A +  ATW GVEVN QGRV+ LSL  N+L+G +P ELGAL+EL+EL
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAI--ATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.180e-18
Identity = 45/76 (59.21%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKEL 76
            M   DR AL + FRSTGG  W R+DNWD  A L  ATW GV VN QGRV+ L L  NNLQG +P ELG LA L+ L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADL--ATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: A0A6H5JA93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA93_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 7.900e-18
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    8 ALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWL 78
            AL A F ST G  WKRK NW+  AGL  ATW GV +NH GRV++L+L  NNL G +P  LGAL+ELK L+L
Sbjct:   56 ALIALFHSTDGANWKRKRNWNTDAGL--ATWEGVRLNHAGRVVELALPNNNLHGSIPEALGALSELKVLYL 124          
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.840e-17
Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    1 MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKE 75
            MA  DR AL A +R+TGG  W+   NWD  A L   TW GV+VN QGRV+KL L  NNL+G +PA LG LA L++
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLK--TWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7166.18278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUC3_ECTSI3.280e-4194.87LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KQQ0_9PHAE2.420e-2058.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUA0_ECTSI1.540e-1958.97Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5L6T0_9PHAE7.050e-1959.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF65_ECTSI1.290e-1857.89Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
D8LCS7_ECTSI1.370e-1859.21LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI2.500e-1860.53LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KQP2_9PHAE3.180e-1859.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA93_9PHAE7.900e-1859.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK91_9PHAE3.840e-1754.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..144
e-value: 7.1E-31
score: 109.0
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 43..128
NoneNo IPR availablePANTHERPTHR46662:SF10coord: 43..128
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 49..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7166contigEcto-sp13_S_contig7166:4122..5476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7166.18278.1mRNA_Ecto-sp13_S_contig7166.18278.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7166 2637..6928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7166.18278.1 ID=prot_Ecto-sp13_S_contig7166.18278.1|Name=mRNA_Ecto-sp13_S_contig7166.18278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MADMDRGALKAFFRSTGGVRWKRKDNWDAAAGLHVATWLGVEVNHQGRVM
KLSLDKNNLQGPMPAELGALAELKELWLHINKLEGPITPEIGSLAALRLL
YLGGNQLSGCIPGALGFLSNLEVLRLENISFPVPFRRSWGNSQH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf