mRNA_Ecto-sp13_S_contig7165.18276.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: D7FUL4_ECTSI (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUL4_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 3.760e-184 Identity = 273/295 (92.54%), Postives = 278/295 (94.24%), Query Frame = 1
Query: 1 MARVSTTTAGGVGVASTALXXXXXXXXAQLPQGSRAQPGGGGGGDGXXXXXXXXXXXXXXXXXGSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDEDNFTYRYYTSCGFDESFFPFTLNCFRGCCPTDVT 885
MARVSTTTAGGVGVA TAL +LPQGSRAQPGGGG GD XXXXXXXXXXXXXXXX GSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLV+AINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALD VEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAV GEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGAD+TVCLDLCSGYEA+IDED FTYRYYTSCGFDESFFPFTLNC+RGCCPT VT
Sbjct: 1 MARVSTTTAGGVGVARTALLFLLLLL-TRLPQGSRAQPGGGGSGDXXXXXXXXXXXXXXXXXEGSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVIAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDAVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVAGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADSTVCLDLCSGYEASIDEDTFTYRYYTSCGFDESFFPFTLNCYRGCCPTGVT 294
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A6H5KP42_9PHAE (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP42_9PHAE) HSP 1 Score: 431 bits (1107), Expect = 1.220e-147 Identity = 194/231 (83.98%), Postives = 210/231 (90.91%), Query Frame = 1
Query: 193 SDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDEDNFTYRYYTSCGFDESFFPFTLNCFRGCCPTDVT 885
S A+VECA +G+DAHY+EFLAGEG+TM RWT T TGCPNH+NWP+NPN VM++N+S+PAYPML+ GGTTDLSSAAGTIGLMRNGVSM+SAWA+D V EYEDTAFYLEADT DPCGGHATPTG+YHYH TAGCLQEQAGAV GEHSP+LGWSYDGFPIYGQLGPGGVEMKMCGADGA T CLDLCSGYEATIDED FTYRYYTSCGFDESFFPFTLNCFRGCCPT T
Sbjct: 49 SSATVECATDGTDAHYEEFLAGEGITMARWTATETGCPNHINWPLNPNAAGVMSVNQSVPAYPMLIASGGTTDLSSAAGTIGLMRNGVSMFSAWAVDAVVEYEDTAFYLEADTFDPCGGHATPTGAYHYHGTAGCLQEQAGAVKGEHSPVLGWSYDGFPIYGQLGPGGVEMKMCGADGAHDTACLDLCSGYEATIDEDEFTYRYYTSCGFDESFFPFTLNCFRGCCPTGNT 279
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A8J2X3U2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3U2_9STRA) HSP 1 Score: 151 bits (382), Expect = 2.480e-38 Identity = 100/259 (38.61%), Postives = 127/259 (49.03%), Query Frame = 1
Query: 205 VECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPG-----------LVMAINES----IPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYS-AWALD-----PVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGA---VVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYYTSCGFDES--------------FFPFTLNCFRG 864
CA +GS A Y E + + VR +TGCPNH ++ PG LV A +S +PA P L +L + GT+ NGV YS A A D P + D E + D C GH+T +G YHYH CL QA A + G HSP +GW+ DGFPIYG GPGGVE++ CGA GADAT C D C GYE +D DN+ YRYY + + +FP+T+ C RG
Sbjct: 61 TSCAADGSSASYTETITTKSGVSVREI-VSTGCPNHESY-CTGKPGNSCGDEGEQTTLVEATEQSLSVEVPANPKLKNSFTAGELDCSMGTVAYALNGVGFYSGAVAFDLGGNCPQLDVADPE--AEWISFDCCSGHSTGSGGYHYHFPPSCLIAQANADAPIAGGHSPQIGWAQDGFPIYGPFGPGGVEIRNCGASGADATYCQDACGGYEGELDGVDNYKYRYYVTGKVGDLNALPSNPKPDSEALYFPYTIRCHRG 315
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A8J2WVX8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVX8_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.900e-38 Identity = 95/259 (36.68%), Postives = 124/259 (47.88%), Query Frame = 1
Query: 211 CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPG-----------LV----MAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWAL----DPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGA-------VVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYYTSCGFDES--------------FFPFTLNCFRG 864
CA +GS A Y E + + VR +TGCPNH ++ PG LV +++ +PA P L +L + GTI NGV YS P + + E + D C GH+T +G YHYH CL QA A V HSP +GW+ DGFPIYG LGPGGVE++ CGA GAD+T C D C GYE +D DN+ YRYY + + +FP+T+ C RG
Sbjct: 39 CAADGSSASYTETITTQSGVSVRKI-VSTGCPNHESY-CTGKPGNSCGDEGKQTTLVEGKEQSLSVEVPANPKLKSSYTAEELDCSMGTIAYALNGVGFYSGAVAFVSGGPCPQLDVADATAEWISFDCCSGHSTGSGGYHYHFPPSCLLAQADADAPVGTTVANGHSPQIGWAQDGFPIYGPLGPGGVEIRNCGASGADSTYCQDACGGYEGELDGVDNYKYRYYVTGKVGDLNALPSNPKPDSEALYFPYTIRCHRG 295
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: R1DZX8_EMIHU (EF-hand domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZX8_EMIHU) HSP 1 Score: 151 bits (381), Expect = 2.350e-37 Identity = 102/267 (38.20%), Postives = 125/267 (46.82%), Query Frame = 1
Query: 199 ASVE--CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPML----LEDG--GTTDLSSAAGTIGLMRNGVSMYSAWA------------LDPVEEYEDTAFYLEADTLDPCGGHATPTGS---YHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYY-----------------TSCGFDESFFPFTLNCFRGCCPT 876
A+VE CAY+GSDA Y+E G +H N A SIPAYP ED TDLS G +GL NGV++Y+AWA D V A E +T D CGGH++ + + YHYH CL Q G +G+HSP +GW YDGFP+YG GP GV+M CG GA CLD C+GY + + D F YRYY TS + SFFPFT C GC P+
Sbjct: 368 ANVEAACAYDGSDAWYEESFGGS--------------VHHTN--------SAGAKAVSIPAYPFFNGASYEDALAAATDLSEQGGDVGLTLNGVAIYTAWAGSYDXXXXXXIDEDDVMSETSNAVTAEGETFDRCGGHSSGSSAGFQYHYHIPPTCLLAQLGQYIGQHSPQVGWMYDGFPVYGPFGPDGVQMIKCGQTGAHEVYCLDACNGYYSDDESIDVFKYRYYMSGNTTDQASLRASPLPTSDPVESSFFPFTPLCSLGCKPS 612
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: D8LCJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ4_ECTSI) HSP 1 Score: 140 bits (353), Expect = 2.020e-35 Identity = 70/108 (64.81%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 268 TMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTA 591
TMVRW T+TGCPNHV+W INPN V N SI AYPM+ D GT DLSSA+GTI +MRNGVS V++Y DTAFYLEAD+ DPCGGHATP G YHYH TA
Sbjct: 46 TMVRWAVTDTGCPNHVSWDINPNFAGVSDRNASILAYPMMSADNGTKDLSSASGTICMMRNGVSH--------VQDYFDTAFYLEADSFDPCGGHATPNGFYHYHGTA 145
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A813E7E6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E7E6_POLGL) HSP 1 Score: 132 bits (333), Expect = 2.260e-31 Identity = 92/262 (35.11%), Postives = 122/262 (46.56%), Query Frame = 1
Query: 211 CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMA----INESIPAYPMLLEDGGTT---------DLSSAAGTIGLMRNGVSMYSAWA---LDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHY--HSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGAD--ATVCLDLCSGY---EATIDEDNFTYRYYTSCGFDES--------------FFPFTLNCFRGCCPTDVT 885
CA +GSD Y E ++ T T GCPNH + +N + + ++P YP + G TT DLS IG++ NG ++S +A V+ Y +A YL T D CG T H+ H CL Q G G HSP +GW++DGFP+YG GPGGV M+ C G A VC D C GY + TIDE + YRYY +D+ ++P T CF GCCP+ VT
Sbjct: 25 CAQDGSDYSYTESVSSSPDTR---TVVANGCPNHPWYQLNDRKPYLNTWEGHVTYTMPLYPQFV--GSTTSPSSGSPAIDLSQTGSPIGILFNGGKLFSPYAGSETGQVKNYSTSATYLIGSTFDQCGCFTT----LHFGCHVPPHCLLNQLGQTSGSHSPQIGWAFDGFPVYGPRGPGGVMMQTCSITGGTYGAAVCTDDCGGYYQNDGTIDE--YYYRYYIQGTYDDGDSCSNPGCTSPGADYYPNTPVCFGGCCPSGVT 275
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: R1DKM5_EMIHU (YHYH domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKM5_EMIHU) HSP 1 Score: 128 bits (322), Expect = 3.970e-31 Identity = 92/261 (35.25%), Postives = 117/261 (44.83%), Query Frame = 1
Query: 205 VECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPG---------------LVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYS-AWALDPVEEYEDTAFYLEADTLDPCGGHATP-----TGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYYTSCGFDE------------SFFPFTLNCFRGCCPTDVT 885
C G+ A Y E + G R T + GCPNH N + L +A IPAYP+L + TI + NGV +YS A + + E + D CGGHA G YHYH CL+ Q G + HSP +GWS DGFPIYG+LGPGGV M+ A G T CLD CSG+E I D FTYRYY + + S +PF + C+RGC D++
Sbjct: 10 TSCDPCGASASYTETIDASGTHHKR-TIVSNGCPNHYNLCTGKSDAAGCGAIGVEGTATEALEIAYQIDIPAYPVLATENDAWP-ECEKETIAMALNGVPIYSGAVGSGDCDILDLDDANAEWTSFDFCGGHARCLAFECNGDYHYHFPPSCLETQIGNLTDGHSPQIGWSLDGFPIYGRLGPGGVTMEHT-AQGCTGTYCLDDCSGFEMEIPGLDEFTYRYYFNGPLSDLVSLPTDPKPSASDYPFAMKCYRGCTYADLS 267
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A8J2X2K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2K6_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.660e-30 Identity = 76/180 (42.22%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 403 TTDLSSAAGTIGLMRNGVSMYSAWA----LDP----VEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGA---VVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATI-DEDNFTYRYYTSCGFDES--------------FFPFTLNCFRG 864
T+ L G I NGV YS LDP ++ Y+DTA ++ + D C GH++ TG YHYH CL QA A + HS +GW+ DGFPIYG LGPGGVE++ CGA GA AT C D C GYE + D DN+ YRYY + ++ +FPFT+ C RG
Sbjct: 131 TSSLDCEMGGIAYALNGVVFYSGAVGNKNLDPPCPQLDIYDDTAEWI---SFDCCSGHSSGTGGYHYHFPPSCLIAQANADAPISDGHSSQIGWAQDGFPIYGPLGPGGVEIRNCGASGAHATYCQDKCGGYEGELPDVDNYKYRYYITGKVNDLNSLPSYPKPDDLDLYFPFTIRCHRG 307
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A7S3JW52_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW52_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.540e-30 Identity = 86/266 (32.33%), Postives = 122/266 (45.86%), Query Frame = 1
Query: 211 CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTD---LSSAAGTIGLMRNGVSMYSAW----------ALDPVEEYEDTAFYLEADTLDPCGGHA--TPTGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGY--EATIDEDNFTYRYY-----------------------TSCGFDES--FFPFTLNCFRGCCPTDV 882
CA +GS + E + G R TN CPNH +NPN IP P + D L+ G IG++ +G +YS + +LD +Y ++A Y E + D C HA + SYH H CL +Q G EHSP +G+ +DGFP+YG GP G+ MK C AD+ C+D C G+ + +I D + YRYY T+C + ++ ++PFT C RGCCP+ V
Sbjct: 51 CAKDGSSYTWFEEIDG----TTRRISTNH-CPNHNYIDLNPNTAYPEESTYDIPLEPKFISSTNINDYLLLNEEGGAIGILYDGSMIYSPYGGRLYGALNFSLD--NDYYNSAPYAEGYSFDMCNQHAALSTAASYHSHVPPSCLLDQLGQTDNEHSPQIGFLFDGFPVYGPRGPNGIMMKSCTESTADSVYCVDKCGGFADDGSIINDGYVYRYYIMGTYKVQASCTWDLWANLDGEATNCDYQQASTYYPFTPLCMRGCCPSGV 309 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7165.18276.1 >prot_Ecto-sp13_S_contig7165.18276.1 ID=prot_Ecto-sp13_S_contig7165.18276.1|Name=mRNA_Ecto-sp13_S_contig7165.18276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp MARVSTTTAGGVGVASTALLFLLLLLLAQLPQGSRAQPGGGGGGDGGGGGback to top mRNA from alignment at Ecto-sp13_S_contig7165:375..5272- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7165.18276.1 ID=mRNA_Ecto-sp13_S_contig7165.18276.1|Name=mRNA_Ecto-sp13_S_contig7165.18276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4898bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7165:375..5272- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7165:375..5272- >mRNA_Ecto-sp13_S_contig7165.18276.1 ID=mRNA_Ecto-sp13_S_contig7165.18276.1|Name=mRNA_Ecto-sp13_S_contig7165.18276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7165:375..5272- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |