mRNA_Ecto-sp13_S_contig7165.18276.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7165.18276.1
Unique NamemRNA_Ecto-sp13_S_contig7165.18276.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: D7FUL4_ECTSI (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUL4_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 3.760e-184
Identity = 273/295 (92.54%), Postives = 278/295 (94.24%), Query Frame = 1
Query:    1 MARVSTTTAGGVGVASTALXXXXXXXXAQLPQGSRAQPGGGGGGDGXXXXXXXXXXXXXXXXXGSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDEDNFTYRYYTSCGFDESFFPFTLNCFRGCCPTDVT 885
            MARVSTTTAGGVGVA TAL         +LPQGSRAQPGGGG GD XXXXXXXXXXXXXXXX GSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLV+AINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALD VEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAV GEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGAD+TVCLDLCSGYEA+IDED FTYRYYTSCGFDESFFPFTLNC+RGCCPT VT
Sbjct:    1 MARVSTTTAGGVGVARTALLFLLLLL-TRLPQGSRAQPGGGGSGDXXXXXXXXXXXXXXXXXEGSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVIAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDAVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVAGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADSTVCLDLCSGYEASIDEDTFTYRYYTSCGFDESFFPFTLNCYRGCCPTGVT 294          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A6H5KP42_9PHAE (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP42_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 1.220e-147
Identity = 194/231 (83.98%), Postives = 210/231 (90.91%), Query Frame = 1
Query:  193 SDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDEDNFTYRYYTSCGFDESFFPFTLNCFRGCCPTDVT 885
            S A+VECA +G+DAHY+EFLAGEG+TM RWT T TGCPNH+NWP+NPN   VM++N+S+PAYPML+  GGTTDLSSAAGTIGLMRNGVSM+SAWA+D V EYEDTAFYLEADT DPCGGHATPTG+YHYH TAGCLQEQAGAV GEHSP+LGWSYDGFPIYGQLGPGGVEMKMCGADGA  T CLDLCSGYEATIDED FTYRYYTSCGFDESFFPFTLNCFRGCCPT  T
Sbjct:   49 SSATVECATDGTDAHYEEFLAGEGITMARWTATETGCPNHINWPLNPNAAGVMSVNQSVPAYPMLIASGGTTDLSSAAGTIGLMRNGVSMFSAWAVDAVVEYEDTAFYLEADTFDPCGGHATPTGAYHYHGTAGCLQEQAGAVKGEHSPVLGWSYDGFPIYGQLGPGGVEMKMCGADGAHDTACLDLCSGYEATIDEDEFTYRYYTSCGFDESFFPFTLNCFRGCCPTGNT 279          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A8J2X3U2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3U2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.480e-38
Identity = 100/259 (38.61%), Postives = 127/259 (49.03%), Query Frame = 1
Query:  205 VECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPG-----------LVMAINES----IPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYS-AWALD-----PVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGA---VVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYYTSCGFDES--------------FFPFTLNCFRG 864
              CA +GS A Y E +  +    VR    +TGCPNH ++     PG           LV A  +S    +PA P L       +L  + GT+    NGV  YS A A D     P  +  D     E  + D C GH+T +G YHYH    CL  QA A   + G HSP +GW+ DGFPIYG  GPGGVE++ CGA GADAT C D C GYE  +D  DN+ YRYY +    +               +FP+T+ C RG
Sbjct:   61 TSCAADGSSASYTETITTKSGVSVREI-VSTGCPNHESY-CTGKPGNSCGDEGEQTTLVEATEQSLSVEVPANPKLKNSFTAGELDCSMGTVAYALNGVGFYSGAVAFDLGGNCPQLDVADPE--AEWISFDCCSGHSTGSGGYHYHFPPSCLIAQANADAPIAGGHSPQIGWAQDGFPIYGPFGPGGVEIRNCGASGADATYCQDACGGYEGELDGVDNYKYRYYVTGKVGDLNALPSNPKPDSEALYFPYTIRCHRG 315          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A8J2WVX8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVX8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.900e-38
Identity = 95/259 (36.68%), Postives = 124/259 (47.88%), Query Frame = 1
Query:  211 CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPG-----------LV----MAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWAL----DPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGA-------VVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYYTSCGFDES--------------FFPFTLNCFRG 864
            CA +GS A Y E +  +    VR    +TGCPNH ++     PG           LV     +++  +PA P L       +L  + GTI    NGV  YS         P  + +      E  + D C GH+T +G YHYH    CL  QA A       V   HSP +GW+ DGFPIYG LGPGGVE++ CGA GAD+T C D C GYE  +D  DN+ YRYY +    +               +FP+T+ C RG
Sbjct:   39 CAADGSSASYTETITTQSGVSVRKI-VSTGCPNHESY-CTGKPGNSCGDEGKQTTLVEGKEQSLSVEVPANPKLKSSYTAEELDCSMGTIAYALNGVGFYSGAVAFVSGGPCPQLDVADATAEWISFDCCSGHSTGSGGYHYHFPPSCLLAQADADAPVGTTVANGHSPQIGWAQDGFPIYGPLGPGGVEIRNCGASGADSTYCQDACGGYEGELDGVDNYKYRYYVTGKVGDLNALPSNPKPDSEALYFPYTIRCHRG 295          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: R1DZX8_EMIHU (EF-hand domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZX8_EMIHU)

HSP 1 Score: 151 bits (381), Expect = 2.350e-37
Identity = 102/267 (38.20%), Postives = 125/267 (46.82%), Query Frame = 1
Query:  199 ASVE--CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPML----LEDG--GTTDLSSAAGTIGLMRNGVSMYSAWA------------LDPVEEYEDTAFYLEADTLDPCGGHATPTGS---YHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYY-----------------TSCGFDESFFPFTLNCFRGCCPT 876
            A+VE  CAY+GSDA Y+E   G                +H N           A   SIPAYP       ED     TDLS   G +GL  NGV++Y+AWA             D V      A   E +T D CGGH++ + +   YHYH    CL  Q G  +G+HSP +GW YDGFP+YG  GP GV+M  CG  GA    CLD C+GY +  +  D F YRYY                 TS   + SFFPFT  C  GC P+
Sbjct:  368 ANVEAACAYDGSDAWYEESFGGS--------------VHHTN--------SAGAKAVSIPAYPFFNGASYEDALAAATDLSEQGGDVGLTLNGVAIYTAWAGSYDXXXXXXIDEDDVMSETSNAVTAEGETFDRCGGHSSGSSAGFQYHYHIPPTCLLAQLGQYIGQHSPQVGWMYDGFPVYGPFGPDGVQMIKCGQTGAHEVYCLDACNGYYSDDESIDVFKYRYYMSGNTTDQASLRASPLPTSDPVESSFFPFTPLCSLGCKPS 612          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: D8LCJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ4_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 2.020e-35
Identity = 70/108 (64.81%), Postives = 78/108 (72.22%), Query Frame = 1
Query:  268 TMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTA 591
            TMVRW  T+TGCPNHV+W INPN   V   N SI AYPM+  D GT DLSSA+GTI +MRNGVS         V++Y DTAFYLEAD+ DPCGGHATP G YHYH TA
Sbjct:   46 TMVRWAVTDTGCPNHVSWDINPNFAGVSDRNASILAYPMMSADNGTKDLSSASGTICMMRNGVSH--------VQDYFDTAFYLEADSFDPCGGHATPNGFYHYHGTA 145          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A813E7E6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E7E6_POLGL)

HSP 1 Score: 132 bits (333), Expect = 2.260e-31
Identity = 92/262 (35.11%), Postives = 122/262 (46.56%), Query Frame = 1
Query:  211 CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMA----INESIPAYPMLLEDGGTT---------DLSSAAGTIGLMRNGVSMYSAWA---LDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHY--HSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGAD--ATVCLDLCSGY---EATIDEDNFTYRYYTSCGFDES--------------FFPFTLNCFRGCCPTDVT 885
            CA +GSD  Y E ++    T    T    GCPNH  + +N     +      +  ++P YP  +  G TT         DLS     IG++ NG  ++S +A      V+ Y  +A YL   T D CG   T     H+  H    CL  Q G   G HSP +GW++DGFP+YG  GPGGV M+ C   G    A VC D C GY   + TIDE  + YRYY    +D+               ++P T  CF GCCP+ VT
Sbjct:   25 CAQDGSDYSYTESVSSSPDTR---TVVANGCPNHPWYQLNDRKPYLNTWEGHVTYTMPLYPQFV--GSTTSPSSGSPAIDLSQTGSPIGILFNGGKLFSPYAGSETGQVKNYSTSATYLIGSTFDQCGCFTT----LHFGCHVPPHCLLNQLGQTSGSHSPQIGWAFDGFPVYGPRGPGGVMMQTCSITGGTYGAAVCTDDCGGYYQNDGTIDE--YYYRYYIQGTYDDGDSCSNPGCTSPGADYYPNTPVCFGGCCPSGVT 275          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: R1DKM5_EMIHU (YHYH domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKM5_EMIHU)

HSP 1 Score: 128 bits (322), Expect = 3.970e-31
Identity = 92/261 (35.25%), Postives = 117/261 (44.83%), Query Frame = 1
Query:  205 VECAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPG---------------LVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYS-AWALDPVEEYEDTAFYLEADTLDPCGGHATP-----TGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATIDE-DNFTYRYYTSCGFDE------------SFFPFTLNCFRGCCPTDVT 885
              C   G+ A Y E +   G    R T  + GCPNH N     +                 L +A    IPAYP+L  +           TI +  NGV +YS A      +  +      E  + D CGGHA        G YHYH    CL+ Q G +   HSP +GWS DGFPIYG+LGPGGV M+   A G   T CLD CSG+E  I   D FTYRYY +    +            S +PF + C+RGC   D++
Sbjct:   10 TSCDPCGASASYTETIDASGTHHKR-TIVSNGCPNHYNLCTGKSDAAGCGAIGVEGTATEALEIAYQIDIPAYPVLATENDAWP-ECEKETIAMALNGVPIYSGAVGSGDCDILDLDDANAEWTSFDFCGGHARCLAFECNGDYHYHFPPSCLETQIGNLTDGHSPQIGWSLDGFPIYGRLGPGGVTMEHT-AQGCTGTYCLDDCSGFEMEIPGLDEFTYRYYFNGPLSDLVSLPTDPKPSASDYPFAMKCYRGCTYADLS 267          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A8J2X2K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2K6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.660e-30
Identity = 76/180 (42.22%), Postives = 97/180 (53.89%), Query Frame = 1
Query:  403 TTDLSSAAGTIGLMRNGVSMYSAWA----LDP----VEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGA---VVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGYEATI-DEDNFTYRYYTSCGFDES--------------FFPFTLNCFRG 864
            T+ L    G I    NGV  YS       LDP    ++ Y+DTA ++   + D C GH++ TG YHYH    CL  QA A   +   HS  +GW+ DGFPIYG LGPGGVE++ CGA GA AT C D C GYE  + D DN+ YRYY +   ++               +FPFT+ C RG
Sbjct:  131 TSSLDCEMGGIAYALNGVVFYSGAVGNKNLDPPCPQLDIYDDTAEWI---SFDCCSGHSSGTGGYHYHFPPSCLIAQANADAPISDGHSSQIGWAQDGFPIYGPLGPGGVEIRNCGASGAHATYCQDKCGGYEGELPDVDNYKYRYYITGKVNDLNSLPSYPKPDDLDLYFPFTIRCHRG 307          
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Match: A0A7S3JW52_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW52_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.540e-30
Identity = 86/266 (32.33%), Postives = 122/266 (45.86%), Query Frame = 1
Query:  211 CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTD---LSSAAGTIGLMRNGVSMYSAW----------ALDPVEEYEDTAFYLEADTLDPCGGHA--TPTGSYHYHSTAGCLQEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLDLCSGY--EATIDEDNFTYRYY-----------------------TSCGFDES--FFPFTLNCFRGCCPTDV 882
            CA +GS   + E + G      R   TN  CPNH    +NPN          IP  P  +      D   L+   G IG++ +G  +YS +          +LD   +Y ++A Y E  + D C  HA  +   SYH H    CL +Q G    EHSP +G+ +DGFP+YG  GP G+ MK C    AD+  C+D C G+  + +I  D + YRYY                       T+C + ++  ++PFT  C RGCCP+ V
Sbjct:   51 CAKDGSSYTWFEEIDG----TTRRISTNH-CPNHNYIDLNPNTAYPEESTYDIPLEPKFISSTNINDYLLLNEEGGAIGILYDGSMIYSPYGGRLYGALNFSLD--NDYYNSAPYAEGYSFDMCNQHAALSTAASYHSHVPPSCLLDQLGQTDNEHSPQIGFLFDGFPVYGPRGPNGIMMKSCTESTADSVYCVDKCGGFADDGSIINDGYVYRYYIMGTYKVQASCTWDLWANLDGEATNCDYQQASTYYPFTPLCMRGCCPSGV 309          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7165.18276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUL4_ECTSI3.760e-18492.54YHYH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5KP42_9PHAE1.220e-14783.98YHYH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A8J2X3U2_9STRA2.480e-3838.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2WVX8_9STRA2.900e-3836.68Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
R1DZX8_EMIHU2.350e-3738.20EF-hand domain-containing protein n=2 Tax=Emiliani... [more]
D8LCJ4_ECTSI2.020e-3564.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813E7E6_POLGL2.260e-3135.11Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
R1DKM5_EMIHU3.970e-3135.25YHYH domain-containing protein n=1 Tax=Emiliania h... [more]
A0A8J2X2K6_9STRA1.660e-3042.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JW52_9STRA2.540e-3032.33Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7165contigEcto-sp13_S_contig7165:375..5272 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score532.3
Seed ortholog evalue1.4e-148
Seed eggNOG ortholog2880.D7FUL4
Model size888
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.YHYH protein
EggNOG OGs2CZR0@1,2SBB2@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-03_002690.1
Cds size888
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7165.18276.1prot_Ecto-sp13_S_contig7165.18276.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7165 375..5272 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463982.0292277-CDS-Ecto-sp13_S_contig7165:374..4521681463982.0292277-CDS-Ecto-sp13_S_contig7165:374..452Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 375..452 -
1681463982.040445-CDS-Ecto-sp13_S_contig7165:1172..12741681463982.040445-CDS-Ecto-sp13_S_contig7165:1172..1274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 1173..1274 -
1681463982.050342-CDS-Ecto-sp13_S_contig7165:2179..22301681463982.050342-CDS-Ecto-sp13_S_contig7165:2179..2230Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 2180..2230 -
1681463982.0603983-CDS-Ecto-sp13_S_contig7165:2847..30371681463982.0603983-CDS-Ecto-sp13_S_contig7165:2847..3037Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 2848..3037 -
1681463982.0705934-CDS-Ecto-sp13_S_contig7165:3563..36851681463982.0705934-CDS-Ecto-sp13_S_contig7165:3563..3685Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 3564..3685 -
1681463982.0813215-CDS-Ecto-sp13_S_contig7165:4339..44301681463982.0813215-CDS-Ecto-sp13_S_contig7165:4339..4430Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 4340..4430 -
1681463982.0918-CDS-Ecto-sp13_S_contig7165:5018..52721681463982.0918-CDS-Ecto-sp13_S_contig7165:5018..5272Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7165 5019..5272 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7165.18276.1

>prot_Ecto-sp13_S_contig7165.18276.1 ID=prot_Ecto-sp13_S_contig7165.18276.1|Name=mRNA_Ecto-sp13_S_contig7165.18276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
MARVSTTTAGGVGVASTALLFLLLLLLAQLPQGSRAQPGGGGGGDGGGGG
DVPGGDEVPGGDEGSDASVECAYNGSDAHYDEFLAGEGLTMVRWTGTNTG
CPNHVNWPINPNPGLVMAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRN
GVSMYSAWALDPVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCL
QEQAGAVVGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADATVCLD
LCSGYEATIDEDNFTYRYYTSCGFDESFFPFTLNCFRGCCPTDVT*
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mRNA from alignment at Ecto-sp13_S_contig7165:375..5272-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7165.18276.1 ID=mRNA_Ecto-sp13_S_contig7165.18276.1|Name=mRNA_Ecto-sp13_S_contig7165.18276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4898bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7165:375..5272- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCACGGGTCTCTACCACAACAGCTGGCGGGGTCGGGGTCGCTAGCAC GGCACTGCTGTTCCTGCTGCTGCTGCTGCTGGCACAGTTGCCTCAAGGCT CGCGTGCTCAGCCGGGAGGAGGCGGCGGCGGCGATGGCGGCGGGGGGGGT GACGTTCCCGGCGGAGACGAAGTTCCTGGAGGGGATGAGGGTTCTGATGC ATCCGTGGAGTGTGCGTACAACGGGAGCGACGCCCACTACGACGAGTTCC TAGCGTGAGAAGAAGTGGATCAGATGGATTATGTTTTGCCGGGGCGCGTT TTGGGCGACTGATGTTGTGGCGTCTGTTTTCATCTACCATGCGCGAAAAA TCGCTCGTTTCGTTGCGCAGGTCCAAGTTTTGTTGGATAACTTAGTTAGT CATCTGGTTGTTGTTGCTTGCATTATTTGCACGCGCCTCGTAATACTGAG ACGAGCGCGCTAAGACGATCTGTAGCTTGCAGGCATTGCTGACAAGCTAA TACACTTTGCCCGTCTCCCCGACAACATTGCTGCCGCCCCCCCTGCCCCC TCGGTGTTTGTAGCCTCCCCCATCCTCAACAATGCCCCCATGTCTCCAAC TGCACTTTAATAATCACCTTCTCTGCGAGAGTATCACCATCAAACGCACA GCCAGCAAAGGCGAGGTCGCGACAGTCAAGTTCGTGGGCAGGGAGCGACG TGGGGCCCGCTCGTTGATTCCACACGATGCCTTCTTTCACCCAGTCTGCC TTTCCCGTCGCAAACCAAAATCGTTTTTTTTCTGTAGTAGTGCAGTATTT GCAAACCTGTTTTTGTGCGTTGTGTGTGTCGTCTGTCCCCAGTGGCGAAG GTTTGACGATGGTGCGATGGACAGGCACAAACACGGGATGCCCGAATCAC GTCAACTGGCCCATCAACCCCAACCCCGGACTGGTGAGCGAGGTCATGTC GGATTGAATCACACCGAAGCCAGTCATCATTTTAAGCCGGACCGCAGTCG CGAGAAATTAATGTTCACGAGAAAGTTGAACAGGGAAAGGGCACGCAGAC TCTATCCCTAACCCAACTTTCACGATTGCATTGTAAATCCAACGACGTCT TTTCTTCAAAATAAAACTTTCGAAGGCCGGTGATCAAGCCACCACGGAGC GCGCTGCCCAACATGAAGCTGTGCGCGTGTTGTCTTCTACTCCCATTGTT CCTTTCGGGCTTGCTTTCGATTTTTCTAGCGTGGTGTAAGGGTGTCTCTC GGGGTGGTTTTTGTGTGTCGGATTCCCGCCAACCAGGTGTCGTCGTGTTG GTGCATCGTTTCTGGTTTTTGTTACCGTTGTGTCGTTATGTTGAGTTGTT GTTCCTTTCCGTGTTTCGTTTGTTCTTATCCCGTCGCCCGCGAAAGGCAC CTTTTTGGTTCACCCTACGGCCGAGCCTCGCCGCGTCTGCTGAAGGCTTG GGGGTCACGCCTAATGGCTTCCTCATTTGGTGGCGCTTGCCTTCGTTTTC CCTTTCACTTAGCGCGGCACTTGGGGGACATTGTCGACGGGCTTGACGAA ATCAACTCAACTTGTCGACACATCTTTCCAACAACAGGTTATGGCCATCA ACGAATCGATCCCGGCCTACCCCATGCTTCTCGAGGACGGGGGTACGACG GACCTGAGCTCTGCCGCCGGGACGATCGGGCTAATGCGCAACGGGGTTTC TATGTACAGGTAGGCAGTCTGGCCACCGCGAGCCTCGTTCAGCATCCCCT GTGAACAGAGAGAGGAGCCTCGCTCAGCATCCCTTGTGCACAGAGAGAGT GTGCGCCGTGCATCATCGCGCCTCTGCTTATAGGTGCTTTGTTCGTGCGG AGGTATGATTCGCCTACTGGTTGAGGGTTGAGGAAAGTGTTCGGTCTACT TCCCTCATCGAAGACGAAGCAGCAGCGATTTATTTCTTAGGAGAGAACGC TGACGCTCGTACCTCGACGTCACCAAAACATGTCGCCCTGCGAGTCGTAG AGGAGTGACGGGGAACAAATTCAAGTCTCCATGGCCATCCTATCATCACG GTACAGCATGCCGTGCTTTTTCCGCAATCGTTCGTAGAGACGCCGCTCTT CTGTTCTCATCACCTCGCTCGCCCCCGCGCTTACTTTCAAGAGCCGCTGT GCGCCTCCCTTGTCGTGTTTTTTCTGTAACAACGATGATGCGGCTGCTGC TGATGATGATGATGATGATGGACGACAACGAAAAGCGCGTGGGCGCTTGA CCCCGTCGAAGAGTACGAAGACACGGCCTTCTACCTGGAAGCCGACACGT TGGACCCCTGCGGGGGGCACGCGACTCCCACGGGGTCCTACCACTACCAC AGCACGGCGGGGTGCCTGCAAGAACAGGCGGGGGCGGTCGTGGGGGAGCA CTCTCCGCTGCTGGGCTGGTCATACGTAAGTCTGATTTGTTCCTTTTTTT GTTTCTTTTTTTTCCGAACCGAAAAAACAGCAGGGGCTTGCGGGGGTACT ACAGACGGCACCCATACATACCGTCCGTACCTTACCGTAGAGGTCCCTGT TTTGTGCCGGTTGTCGGTGTAGTGCTGGTAGTTTCGGTGGGCACCCACCG CAATGCAGTACAAGAAACTACGTACCTTGGAACAGTGCCGGTGTCCGGTA CAGTACCGTTACAAAACAGAGACCTCACCGTAGTTGTTGTTTTTTCTTGG GGGAACATTGAATGGAACGCTACATTTCGCCGATGAAGGCTGCAAGCCGA TCGGAGTCAACACGCTAGTGAGAGGTTAGTTGATGGTTCCAGGGAGGGCT GGATGAAAGTCTCTGGAGCAAGAGTGACGAACAGGGAAAATGGAAAGGTG GACGGGCGCTAACGCAAGACCTTTCATGCGCCAAGTTTGACTAGAAAATG GACGCGTTGAGAACCAACCACTCTCGGGAGCTGGCTGGCATGTGTATGTT TACGTGTTTTCCTCCTTCGTCTGCCATTCTCCACTGTCCAACCCCCAGCC CTCTCTTCCGTTCCCTTCCCTTTCCGCGCGACGCCATCTCAGGACGGCTT TCCCATCTACGGGCAGCTGGGGCCTGGTGGAGTGGAGATGAAGGTATGTA TAGTTCGTGAGTGTTGTTGTCGTGTGACTGCTGACTTGTCTTCCAAAACC CCCAAAAAAATTAATTTAAACAATGAACACCATATAAACCTTGTCTTCCA AAAAACAAAAAAATGCGTAATATAAATAATAAACACCATATAAACCTTGT CTTCCAAAAACCCCAAAAATAATAAACTTAAATGAAAAACACCATATAAA TTATTGCGTCCCCAAATCTGAAATATATATATTTCCAAAACCACGCCGAA CCCAAACAAACAATTTCTTGATCTCCGCGTCAGTTTGTTTCGGGATCCGG TGGCCTACCCTACATAAATGCACCGGATCTGCGGTTTGTCCACATTCACT TTTCCTATTAGCACCTCGCCGCCATCCCTACTACTATCGGAGCCATGAGG CGATCGTGAACATGTTTCGCACGTTTTCTACAACCAGGTTCAACGTATCG CGTCTTCTGAGAGGATCGTAAATATCGGTTCCCCGCTGTCCTTAGAAGTG AACGGGGCAGGCCTCTCTTTCGTTTTTTCTGACCGACCCCCTTCGTATTC CAGACAACAAGGGGCCAAAAACCGACAATAAAACACGTCTCTCCAGATGC CTTGGAACAAGAACATGATCCCCATTAGATCACCCCGCCGTGCCACGCTG GAAGCGGGGGCGCAACGCTCCGGCCATGCGGCACGCGATAAGTTCCCCAC ACGTCGCAACTGCTGCATATTTGGCGGCCACAGAAGATTGGCCCACTGAA GCCGAACCACCAATCACTGCGGCGCCGCCCTCTGTTGCGTGATGACGATG CATGTACCCGGATCACAGACAACCTCGCGGTCGAAAGTCTCGGGTCACCT AAACCACTGGAACCTGTTGTGCCGAAAATGTTTGGCGGTGTGTGACAGAT GTGTGGAGCAGATGGGGCGGACGCGACCGTCTGCCTCGACTTGTGCTCCG GGTACGAGGCCACCATCGACGAGGACAACTTCACGTACCGCTACTACACG GTACGTTACCGTATACCGCATACCGCAACATGGATGGAATAAAAGCGCGC GATCGCTGTCATGATTCTATGTGCTTCTTTTGTAGACGGCGATTAATGTA TTTTGAAGTGTAAGCAAGACGGACTTCTCACGAACGGCGGGTACTTGTGT TGTGTTGCTGGGCTTGTCGGACGCGACTACGGAGAGTTTGGGCAGCCTTC ATGCACCATATCTACTCTGAAAATCACGGTTCACACGTGCACAAGCTAGG TAGCGCAAGCTGCATATGTAATCGTCAGTCCTCGGATTTCATAACCACAC ATATTCATCAATGCCTATGTGCACAGGGACGTTTTATCACCATCGTGTCA GTTGGTGCGCATGTGTTAGTCGCCCATCCTCAACCAAGCGCGTTTCATCA TCCTCATCTCATCCACCGCAGATCGACTATTTTTGCCTAGCCATGAACAC GAGGCCATCTGCTACGAACGAACGAAGTTCGCAGCCCTTGGAGTTAATCG TTGTTGTTTGGCGACACTCCGCGGCTGTACTCCGCTCGATGGTAATATGG GTGAACCGCCAGCACAACCGCCTTACTCGTGCCAAACGACAATCGTTGTT GAGCCCGAATAATGATGATCGTCTTTTTTCCGTGCTGCTGCTGGTGTTTT CTTTTGATTGTTGTTCGTTGTTCGTTGTTCGACCGATGCGTGCGTGCCTG TGTGTGCGCCCGTTGTCCAGTCATGTGGCTTCGACGAGTCCTTTTTCCCC TTCACCCTCAACTGCTTCCGCGGCTGCTGCCCGACGGACGTCACGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7165:375..5272-

>mRNA_Ecto-sp13_S_contig7165.18276.1 ID=mRNA_Ecto-sp13_S_contig7165.18276.1|Name=mRNA_Ecto-sp13_S_contig7165.18276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7165:375..5272- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCACGGGTCTCTACCACAACAGCTGGCGGGGTCGGGGTCGCTAGCAC
GGCACTGCTGTTCCTGCTGCTGCTGCTGCTGGCACAGTTGCCTCAAGGCT
CGCGTGCTCAGCCGGGAGGAGGCGGCGGCGGCGATGGCGGCGGGGGGGGT
GACGTTCCCGGCGGAGACGAAGTTCCTGGAGGGGATGAGGGTTCTGATGC
ATCCGTGGAGTGTGCGTACAACGGGAGCGACGCCCACTACGACGAGTTCC
TAGCTGGCGAAGGTTTGACGATGGTGCGATGGACAGGCACAAACACGGGA
TGCCCGAATCACGTCAACTGGCCCATCAACCCCAACCCCGGACTGGTTAT
GGCCATCAACGAATCGATCCCGGCCTACCCCATGCTTCTCGAGGACGGGG
GTACGACGGACCTGAGCTCTGCCGCCGGGACGATCGGGCTAATGCGCAAC
GGGGTTTCTATGTACAGCGCGTGGGCGCTTGACCCCGTCGAAGAGTACGA
AGACACGGCCTTCTACCTGGAAGCCGACACGTTGGACCCCTGCGGGGGGC
ACGCGACTCCCACGGGGTCCTACCACTACCACAGCACGGCGGGGTGCCTG
CAAGAACAGGCGGGGGCGGTCGTGGGGGAGCACTCTCCGCTGCTGGGCTG
GTCATACGACGGCTTTCCCATCTACGGGCAGCTGGGGCCTGGTGGAGTGG
AGATGAAGATGTGTGGAGCAGATGGGGCGGACGCGACCGTCTGCCTCGAC
TTGTGCTCCGGGTACGAGGCCACCATCGACGAGGACAACTTCACGTACCG
CTACTACACGTCATGTGGCTTCGACGAGTCCTTTTTCCCCTTCACCCTCA
ACTGCTTCCGCGGCTGCTGCCCGACGGACGTCACGTGA
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