prot_Ecto-sp13_S_contig7164.18275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7164.18275.1
Unique Nameprot_Ecto-sp13_S_contig7164.18275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length588
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7164.18275.1 vs. uniprot
Match: D7FTS4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS4_ECTSI)

HSP 1 Score: 1034 bits (2673), Expect = 0.000e+0
Identity = 545/594 (91.75%), Postives = 556/594 (93.60%), Query Frame = 0 
Query:    1 MVSRPFRITAVNKLAHCVLAVGSAAEKGPETSASGADEHRHILLVGFEDICRLRHFLVVACESWAIRNGVGTPAKELLSCAPVAAQRYLAGVLEVMTGPLRDQV-------DAQVELMEDLADEMILDAVVKEAFFSTGDIFFEISRRLEAAAATVAACSAVNTAAGETAFCHDGFDVRRAVVSDARLISATAAVLDAAFFHSIQIPQRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCEDGADRRDIDTGGRNDLKGFSPAGVERLAEDTMSPLDTLSTGILDRVVRALNGISDVVSLFNIENEHLGIVRNLVGVGLGVKVRVGIQPGASDALDFVVRVNDRAVDLIEDLDRREQERQQLEAARWLAPGPVGVSPTSEKSKGKRTSVFARLGSLSPRPRRSVTPPLSPPSPAVEPPVGLPPINENSDVRANHILQGGSGSTGKTTARAGVPKQEKSDVDNASGGLFGGLVGLEGRRGGGNSVGPPPPLSATQGFECQASSPRGFLWSTPVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLDVLSRLDGGAPRLVFRQTAVFLHEIANLFYSFNSAVRK 587
            MVSRPFRITA  KLAHC  AVGSAA+KGPETSASGADEHRHILLVGFEDICRLRHFLVVACESWAIRNGVGT AKELLSCAPVAAQRYLAGVLEVMTGPLRDQV       DAQVELM+DLADEMILDAVVKEAFFSTGDIFFEISRRLEAAAATVAA SAVNTAAGE AF HDGFD RRAVVSDARLISATAAVLDAAFFHSIQIPQRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCEDGAD  DIDTGGRNDLKGFSPAGVERLAED MSPLD LSTG+LDRVVRALNGISDVVSLFNIE+EHLGIVRNLVGVGLGVKVRVGIQP ASDAL FVVRVNDRAVDLIEDLDRREQER+QLE AR LA GPV VSPTSEK+KGK+ SVFARLGSLSPRPRRSVTPPLSPPSPAVEPPVGLPPIN+NSDVR N+IL+GGSGS  KTTARAGVPKQEKSDVDNASGGL GGLVGLEGRRGGGNSVG PPP SATQ FE Q SSPRGFL S PVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLDVLSRLDGGAPRLVFRQTA+FLHEIANLFYSFNSAVRK
Sbjct:    1 MVSRPFRITAAKKLAHCESAVGSAADKGPETSASGADEHRHILLVGFEDICRLRHFLVVACESWAIRNGVGTRAKELLSCAPVAAQRYLAGVLEVMTGPLRDQVLQTEGTVDAQVELMQDLADEMILDAVVKEAFFSTGDIFFEISRRLEAAAATVAAGSAVNTAAGEIAFRHDGFDGRRAVVSDARLISATAAVLDAAFFHSIQIPQRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCEDGADNSDIDTGGRNDLKGFSPAGVERLAEDAMSPLDALSTGVLDRVVRALNGISDVVSLFNIEHEHLGIVRNLVGVGLGVKVRVGIQPAASDALAFVVRVNDRAVDLIEDLDRREQERRQLEEARLLALGPVSVSPTSEKNKGKKRSVFARLGSLSPRPRRSVTPPLSPPSPAVEPPVGLPPINDNSDVRTNYILEGGSGSASKTTARAGVPKQEKSDVDNASGGLLGGLVGLEGRRGGGNSVGSPPPPSATQCFESQVSSPRGFLSSAPVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLDVLSRLDGGAPRLVFRQTALFLHEIANLFYSFNSAVRK 594
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7164.18275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTS4_ECTSI0.000e+091.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7164contigEcto-sp13_S_contig7164:1388..3796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7164.18275.1mRNA_Ecto-sp13_S_contig7164.18275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7164 1178..6275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7164.18275.1 ID=prot_Ecto-sp13_S_contig7164.18275.1|Name=mRNA_Ecto-sp13_S_contig7164.18275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=588bp
MVSRPFRITAVNKLAHCVLAVGSAAEKGPETSASGADEHRHILLVGFEDI
CRLRHFLVVACESWAIRNGVGTPAKELLSCAPVAAQRYLAGVLEVMTGPL
RDQVDAQVELMEDLADEMILDAVVKEAFFSTGDIFFEISRRLEAAAATVA
ACSAVNTAAGETAFCHDGFDVRRAVVSDARLISATAAVLDAAFFHSIQIP
QRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCEDGADRRDIDTGGR
NDLKGFSPAGVERLAEDTMSPLDTLSTGILDRVVRALNGISDVVSLFNIE
NEHLGIVRNLVGVGLGVKVRVGIQPGASDALDFVVRVNDRAVDLIEDLDR
REQERQQLEAARWLAPGPVGVSPTSEKSKGKRTSVFARLGSLSPRPRRSV
TPPLSPPSPAVEPPVGLPPINENSDVRANHILQGGSGSTGKTTARAGVPK
QEKSDVDNASGGLFGGLVGLEGRRGGGNSVGPPPPLSATQGFECQASSPR
GFLWSTPVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLD
VLSRLDGGAPRLVFRQTAVFLHEIANLFYSFNSAVRK*
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