mRNA_Ecto-sp13_S_contig7162.18271.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7162.18271.1
Unique NamemRNA_Ecto-sp13_S_contig7162.18271.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: D8LTY6_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY6_ECTSI)

HSP 1 Score: 541 bits (1393), Expect = 3.390e-191
Identity = 308/339 (90.86%), Postives = 316/339 (93.22%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDKPTGDTAKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGMGGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKTSSGETQVDKTITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGKNYYDVLG+PKGTSDAAKIKK YRKLALRFHPDKPTGDTAKFQEISEAFEVL DDKKKKLYDQFGEAGLG GV XXXXXX   SG+PFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXF GSDPFSIFESMFGTGD+NEAVGREGFPMGAGLNG+RMGGMGGGF    PA          RRQAPPVEHCLNLSLEELY+GSSKRMRITKKTS+GE QVDKTITIKPGWK+GTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDL+CTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY
Sbjct:    1 MGKNYYDVLGVPKGTSDAAKIKKAYRKLALRFHPDKPTGDTAKFQEISEAFEVLGDDKKKKLYDQFGEAGLGPGVGXXXXXXXXXSGMPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFHGSDPFSIFESMFGTGDINEAVGREGFPMGAGLNGMRMGGMGGGFXXXXPAXXXXXXXXXXRRQAPPVEHCLNLSLEELYQGSSKRMRITKKTSTGEAQVDKTITIKPGWKNGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 339          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: A0A836CDH0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH0_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.960e-72
Identity = 163/398 (40.95%), Postives = 220/398 (55.28%), Query Frame = 1
Query:   67 TLAQHPQDQMGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDKPTGDT----AKFQEISE-------------------AFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFP---MGAGLNGVRM--GGMGGGFGGGMPAA---------------------GSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKTSSGET-QVDKTITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            T+ +  + +MGK++Y VL + +  S+A  IKK YRK AL++HPDK   +      KFQE+ +                   AFEVLSD +K+KLYDQFGEA +  G        ++E+G P     G    G                      F  SDP  IFE  FGT D  EA G  GF    MG    GVRM  GG GG   G                          GS S P+    QAP +EH L +SLE+LY G++K+MRIT+KT  G T   DK I IKPGWKDGT++T++++GDEQ G++PAD++F+IKTKPH RF R D+DL+    +TL+QAL+G    ++TLDGR++ V+EP L +S+ ET + GEGMPS K+  ++G+L V+Y
Sbjct:  102 TIKRKRESEMGKDFYKVLNVSRDASEAD-IKKAYRKAALKWHPDKNPDNKEEAQTKFQEVGQGLCVCLVDLKLACIVTYIQAFEVLSDPEKRKLYDQFGEAAINPGA-------ADENGAPGAEFSGFGRGGGMGGMPAGTH------------FTHSDPSKIFEQFFGTADPGEA-GSRGFDFMGMGGMPQGVRMHMGGPGGASAGXXXXXXXXXXXXXXXXXXXXXXSMRHGSQSAPQP---QAPAIEHQLAVSLEDLYSGTTKKMRITRKTLDGGTASTDKEIKIKPGWKDGTRVTFERQGDEQAGVVPADVMFIIKTKPHDRFKRIDNDLIYEANVTLQQALSGVDTVLETLDGRRLRVSEPFLPSSTYETRITGEGMPSHKNSSIKGDLVVKY 475          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: A0A7S0SR92_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR92_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.750e-64
Identity = 153/354 (43.22%), Postives = 202/354 (57.06%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDKPTGDT-----AKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEE-SGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREG-FPMGAGLNGVR-MGGMGGGFGGGMPAAGSPSPP--KAARRQAPPVEHCLNLSLEELYKGSSKRMRITKK---TSSGETQV--DKTITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY VL + K  S   +IKK+Y+KLAL++HPD+ T D      AKFQEIS+AFEVLSD +K+K+YDQ GE GL  G+       S   SG+P    +GA+                         F  S    IF + FGT D   A G  G F   +G  G+  M  MGGG   GMP   +   P    A  +APPV H L ++LE++Y G  KRMRITKK    S   TQV  DK I +KPGWKDGTKIT+++EGDE PG++PADI+F ++TKPH RF R+  DL+    ++L +A +G    I TLD R++++ E     S    +   EGMP+ K Q +RGNL V++
Sbjct:    1 MGKDYYKVLNVNKNAS-VDEIKKSYKKLALKWHPDRVTPDKKDEAQAKFQEISQAFEVLSDPEKRKVYDQVGEEGLNGGIPTGADGASFNFSGMP----QGAT-----------------------FHFSHSSADDIFRNFFGTSDPFAAAGESGGFGGSSGFGGMPFMASMGGG---GMPRGFTNIRPTQSQALTKAPPVNHTLYVTLEDIYTGVLKRMRITKKILDASGVSTQVTVDKEIQVKPGWKDGTKITFEREGDESPGIIPADIIFTLQTKPHDRFERDGDDLIHKCSVSLYEAFSGVRKTIQTLDSRQLVI-EARSVCSDTVKLYPNEGMPNTKKQ-IRGNLKVKF 321          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: A0A8J9RN24_9CHLO (DnaJ homolog subfamily B member 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RN24_9CHLO)

HSP 1 Score: 217 bits (552), Expect = 4.020e-64
Identity = 146/364 (40.11%), Postives = 194/364 (53.30%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDKPTGD----TAKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGMGGGFGGGMPAAGSPSPP----------------KAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKTSSGETQVDK-----TITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY+VLG+ +  SD   IKK YRKLA++ HPDK  G+      KF+E+SEAFEVLSD +K+++YDQFGE GL             + G+P     G  P G                      F  ++P  IF   FG    +   G  G P    L G   GGM GG G GM A     P                 +A  RQ PP+EH L  +LEELY+G++KRM+I++       + D      +I IKPGWK GTKIT+ ++GDE+PG++PADI+FVI  K HP F RE +DL+ T  + L  AL G TI + TLDGR + V+   ++    E  V+GEGMP  K    +G+L VR+
Sbjct:    1 MGKDYYNVLGVSRNASDDD-IKKAYRKLAVKHHPDKNPGNQEKAAEKFKEVSEAFEVLSDPEKRQVYDQFGEEGL-------------KGGMPGNMGGGGMPGGMH--------------------FNATNPEEIFARFFGG---SSPFGGGGGPGADDLFGSLFGGMPGGRGAGMHAXXGGMPAGXXXXXXXXXXXGMNGRAGPRQDPPMEHQLPCTLEELYQGTTKRMKISRNVMDATGRTDHVTETLSIDIKPGWKKGTKITFPKKGDERPGVIPADIIFVINEKKHPVFEREGNDLIHTAKLPLVDALCGATIKVTTLDGRPLTVSVSDVARPGAEKRVKGEGMPQSKAPGTKGDLRVRF 327          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: L8GLM4_ACACA (DnaJ family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GLM4_ACACA)

HSP 1 Score: 212 bits (540), Expect = 1.400e-62
Identity = 149/349 (42.69%), Postives = 190/349 (54.44%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDKPTGDTA----KFQEISEAFEVLSDDKKKKLYDQFGEAGLGAG-VXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGMGGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKT--SSGETQVDKTI---TIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY +LG+ + T+ AA IK  YRK AL++HPD+          KF+E+SEA+EVLSD+KKK LYD+FGE G+ AG         S  S   F  SR    F                       F GS+PFS   S    G      G + F    G +         GFGG         PP+   ++APP+E     +LEELY G+ KRM+ITK    S GE QV + I   T+KPGWK+GTKIT+ QEGD+ PG++PADIVF+++ KPHP FTRE  DLV T  I+L QAL G  + I TLDGR + V    +        V GEGMP QK+   RGNL +R+
Sbjct:    1 MGKDYYAILGIER-TASAADIKAAYRKQALKWHPDRNADQKQLAEEKFKEVSEAYEVLSDEKKKDLYDRFGEEGVKAGGAPGGGGASSAHSFNSFRFSRPEDIFSQF--------------------FGGSNPFS--RSSGRNGGAGGFYGFDAFGEPEGFDS--------GFGG--------FPPRP--QKAPPIERTFGCTLEELYTGTMKRMKITKTITESGGEKQVIEKILELTVKPGWKEGTKITFAQEGDQAPGIIPADIVFILQQKPHPLFTREKSDLVYTANISLTQALCGAELSIVTLDGRTLNVHLRDVIPPGFSKTVPGEGMPDQKNPEKRGNLVIRF 308          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: Q20774_CAEEL (J domain-containing protein n=6 Tax=Caenorhabditis TaxID=6237 RepID=Q20774_CAEEL)

HSP 1 Score: 209 bits (532), Expect = 2.260e-61
Identity = 148/350 (42.29%), Postives = 191/350 (54.57%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDK--PTGDTAKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGV-----RMGGMGGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKK--TSSGETQVDK--TITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY VLG+ KG +D  +IKK YRK+AL++HPDK    G   KF+EI+EA++VLSDDKKKK+YDQFGE GL  G    XXXX       F   RG                               DP +IF S FG  D   A G   F +G G           GGM  G  GGM   G     +   RQ P V H L++SLE++ KG++K+M+IT+K  T + +   DK  T+TIKPGWK GTKIT+ +EGD+ P   PADIVFVIK KPHP+F RE  D+     I+L+ ALTG  I I TLDG    +    +        + G+G+P+ K    RG+L + +
Sbjct:    1 MGKDYYKVLGISKGATDD-EIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKKIYDQFGEEGLKEGGPGAXXXXXXXMHYEF---RG-------------------------------DPMNIFSSFFGGSDPFGAGGPGMFDLGGGXXXXXXXXXNQGGMDDGMFGGMHQGGR----RGHARQDPAVLHDLSVSLEDVLKGTTKKMKITRKVMTDNAQRLEDKVLTVTIKPGWKSGTKITFPKEGDQHPNRTPADIVFVIKDKPHPKFKREGSDIKRVEKISLKSALTGLDIMIPTLDGADYRLQLNDVIKPGTTRRLTGKGLPNPKSPSHRGDLIIEF 311          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: H3GA13_PHYRM (J domain-containing protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3GA13_PHYRM)

HSP 1 Score: 209 bits (533), Expect = 2.970e-61
Identity = 148/362 (40.88%), Postives = 202/362 (55.80%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDK----PTGDTAKFQEISEAFEVLSDDKKKKLYDQFGEAGLGA--------GVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGM----GGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKT---SSGETQVDKTIT---IKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGF-TIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY VL + KG +D  +++K YRKLAL++HPDK    P G   KFQ+I EA+EVLSD KK+++YD +GE GL            X XXXXX    G  +T S G  P G                      F  +DP  IFE  FGT +++EA GR+  PM +  + +  GGM     GGFGG          P   +RQ   ++  L + LE+LY G +K+++IT+K    SS + + ++ I    +KPGWKDGTK+T++ +GD  PG    DIVFVIK KPH +FTR+  +L+    ++L  AL G  T+ I TLDGR+V V   G+     + V+ GEGMP QK    RGNL V +
Sbjct:    1 MGKDYYAVLNVAKGATDD-ELRKAYRKLALKWHPDKNPNDPDGAQKKFQDIGEAYEVLSDKKKREIYDMYGEEGLKGQPXXXXXXXXXMXXXXXXXPGGFTYTTSSGGFPAGSSFS------------------FHSTDPSKIFEQFFGTSNLHEAEGRD--PMASMFSDMGFGGMRGMQSGGFGG--------RDPFGQQRQPQQLKSELEVPLEQLYSGCTKKLKITRKVHDPSSNQLREEQKILEIDVKPGWKDGTKVTFEGQGDALPGRPAQDIVFVIKQKPHNKFTRDGDNLLYRAKLSLRDALLGSGTLTIKTLDGREVPVPLGGVVAPGTQMVIAGEGMPLQKRTSQRGNLVVEF 333          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: A0A6G0V4D3_9BILA (J domain-containing protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V4D3_9BILA)

HSP 1 Score: 206 bits (524), Expect = 3.140e-60
Identity = 140/347 (40.35%), Postives = 193/347 (55.62%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDK--PTGDTAKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGD-VNEAVGREGFPMGAGLNGVRMGGMGGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKTSSGETQV---DK--TITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY +LG+ KG ++  +IKK YRK+AL++HPDK    G   KF+E++EA++VLSD KKK++YD+FGE GL A             G+P     GA+ F                       F G DP  +F  MFG G  +    G  G P GA          G  FG GMP  G P   +  +RQ P V+H L +SLE+++KG +K+MRIT+K  S +  V   DK  +I IKPGWK GTKIT+ +EGD+ PG +PADI FVIK KPHP+F RE  D+     ++L+ AL G +I +  LDG    +T   +   +    + G+G+P+ K    RG+L V +
Sbjct:    1 MGKDYYKILGIAKGATED-EIKKAYRKMALKYHPDKNKDPGAETKFKEVAEAYDVLSDAKKKEIYDKFGEEGLKA------------DGVPGGAGAGANGF--------------------HYQFTG-DPMRMFSQMFGNGGGLFTDFGGFGGPGGADFVFTN----GDDFGFGMPGMGHP---RRTQRQDPTVQHELPVSLEDIHKGCTKKMRITRKVVSADGSVKTEDKVLSINIKPGWKSGTKITFPKEGDQMPGRVPADIAFVIKDKPHPKFKREGSDIRYVHKLSLKDALCGTSIDVPILDGTSQRMTIDTVIKPNSTRRLSGQGLPNPKLSNKRGDLIVEF 306          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: A0A484M5J3_9ASTE (J domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484M5J3_9ASTE)

HSP 1 Score: 205 bits (522), Expect = 1.120e-59
Identity = 143/348 (41.09%), Postives = 198/348 (56.90%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDK-PTGDT---AKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGMGGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKTS--SGETQ-VDK--TITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MG +YY +LG+ +   D   +KK YRKLA+++HPDK PT      AKF++ISEA++VLSD +K+ +YDQ+GE GL  GV       +   G       GA+ F                       F GS PF       G  D     GR G      L G  +    GG GGG+P   S     AA+R+ PP+E  L  SLE+LYKG++K+M+I+++ +  SG+T  V++  TI IKPGWK GTKIT+ ++G+E PG+ P+D+VF+I  KPH  FTR+ +DLV T  ITL +ALTG+T+ + TLDGR + V        + E VV  EGMP  KD   +GNL +++
Sbjct:    1 MGVDYYKILGVDRNAKDDD-LKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYDVLSDPQKRTVYDQYGEEGLKGGVPPPGAGGAXXPG-------GATFFSTGDGPTTFRFNPRSADDIFAEFFGGSSPFGGMGGGSGMRD-----GRFGS-----LFGDNIFSSFGGDGGGVPMHQS-----AAQRKGPPIEQTLPCSLEDLYKGTTKKMKISREIADASGKTMPVEEILTINIKPGWKKGTKITFPEKGNELPGITPSDLVFIIDEKPHKVFTRDGNDLVYTQKITLAEALTGYTVHLTTLDGRSLTVPINTPINPNYEEVVPREGMPLPKDPSKKGNLRIKF 325          
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Match: A0A813P3P3_9BILA (Hypothetical protein n=2 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813P3P3_9BILA)

HSP 1 Score: 205 bits (521), Expect = 1.160e-59
Identity = 150/350 (42.86%), Postives = 202/350 (57.71%), Query Frame = 1
Query:   94 MGKNYYDVLGLPKGTSDAAKIKKTYRKLALRFHPDK--PTGDTAKFQEISEAFEVLSDDKKKKLYDQFGEAGLGAGVXXXXXXXSEESGIPFTRSRGASPFGXXXXXXXXXXXXXXXXXXXXXXFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGMGGGFGGGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKT---SSGETQVDK---TITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLVCTVIITLEQALTGFTIPIDTLDG---RKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 1110
            MGK+YY +LGL K  SD   IKK YRKLAL++HPDK    G   KF+E++EA+E+LSD KKK++YD++GE GL AG XXXXXXX       +T       F                       F G+DPF++F   FG  D + + G  GFP   GL   + GG  GG GG        S  +  + Q PPVEH L +SLEE+  G++K+M+I++K     S  T+V+    TI IKPGWK GTKIT+ +EGD+ P  +PADIVF+IK K HP F R+  DL+ T  I+L+ AL G TI + TLD    RK+ + E  +   + E  + G+G+P  K    RG++ VR+
Sbjct:    1 MGKDYYKILGLTKNASDDD-IKKAYRKLALKYHPDKNKEAGAEEKFKEVAEAYEILSDPKKKEIYDKYGEEGLKAGGXXXXXXXXPGQQFFYTNVDPHQTF--------------------RMFFNGADPFAMF---FGGDDDDGSGGFGGFP--GGLGAFQFGG--GGLGGQRQ-----SQMQRKKTQDPPVEHELLVSLEEINSGTTKKMKISRKVLNADSRSTRVEDKVLTIDIKPGWKAGTKITFPREGDQSPSTIPADIVFIIKDKVHPTFKRDGSDLLYTAKISLKDALCGTTITVPTLDASRVRKLQLNE--IIKPTTEKRLTGDGLPYPKTPTKRGDIIVRF 315          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7162.18271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY6_ECTSI3.390e-19190.86Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CDH0_9STRA2.960e-7240.95J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S0SR92_9STRA1.750e-6443.22Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8J9RN24_9CHLO4.020e-6440.11DnaJ homolog subfamily B member 4 n=1 Tax=Coccomyx... [more]
L8GLM4_ACACA1.400e-6242.69DnaJ family protein n=1 Tax=Acanthamoeba castellan... [more]
Q20774_CAEEL2.260e-6142.29J domain-containing protein n=6 Tax=Caenorhabditis... [more]
H3GA13_PHYRM2.970e-6140.88J domain-containing protein n=19 Tax=Peronosporace... [more]
A0A6G0V4D3_9BILA3.140e-6040.35J domain-containing protein n=1 Tax=Halicephalobus... [more]
A0A484M5J3_9ASTE1.120e-5941.09J domain-containing protein n=3 Tax=Cuscuta sect. ... [more]
A0A813P3P3_9BILA1.160e-5942.86Hypothetical protein n=2 Tax=Didymodactylos carnos... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7162contigEcto-sp13_S_contig7162:2..5021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score216.1
Seed ortholog evalue2.8e-53
Seed eggNOG ortholog164328.Phyra71932
Model size1112
KEGG koko:K09510
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.DnaJ C terminal domain
EggNOG OGs3QADF@4776,COG0484@1,KOG0714@2759
Ec32 ortholog descriptionHeat shock protein 40
Ec32 orthologEc-12_003870.1
Cds size1110
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7162.18271.1prot_Ecto-sp13_S_contig7162.18271.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7162 2..5021 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463981.5926278-CDS-Ecto-sp13_S_contig7162:1..1531681463981.5926278-CDS-Ecto-sp13_S_contig7162:1..153Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7162 2..153 -
1681463981.6069236-CDS-Ecto-sp13_S_contig7162:655..7571681463981.6069236-CDS-Ecto-sp13_S_contig7162:655..757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7162 656..757 -
1681463981.618517-CDS-Ecto-sp13_S_contig7162:1222..13401681463981.618517-CDS-Ecto-sp13_S_contig7162:1222..1340Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7162 1223..1340 -
1681463981.6332507-CDS-Ecto-sp13_S_contig7162:2226..24411681463981.6332507-CDS-Ecto-sp13_S_contig7162:2226..2441Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7162 2227..2441 -
1681463981.648421-CDS-Ecto-sp13_S_contig7162:4185..44791681463981.648421-CDS-Ecto-sp13_S_contig7162:4185..4479Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7162 4186..4479 -
1681463981.6622658-CDS-Ecto-sp13_S_contig7162:4792..50211681463981.6622658-CDS-Ecto-sp13_S_contig7162:4792..5021Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7162 4793..5021 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7162.18271.1

>prot_Ecto-sp13_S_contig7162.18271.1 ID=prot_Ecto-sp13_S_contig7162.18271.1|Name=mRNA_Ecto-sp13_S_contig7162.18271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=370bp
TAVSPTFLPYAPQPLREGKRDKTLAQHPQDQMGKNYYDVLGLPKGTSDAA
KIKKTYRKLALRFHPDKPTGDTAKFQEISEAFEVLSDDKKKKLYDQFGEA
GLGAGVGGGGGESSEESGIPFTRSRGASPFGGGGGGTHQTFSFSTGGGGG
GGGFQGSDPFSIFESMFGTGDVNEAVGREGFPMGAGLNGVRMGGMGGGFG
GGMPAAGSPSPPKAARRQAPPVEHCLNLSLEELYKGSSKRMRITKKTSSG
ETQVDKTITIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFT
REDHDLVCTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVR
GEGMPSQKDQRVRGNLTVRY
back to top

mRNA from alignment at Ecto-sp13_S_contig7162:2..5021-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7162.18271.1 ID=mRNA_Ecto-sp13_S_contig7162.18271.1|Name=mRNA_Ecto-sp13_S_contig7162.18271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7162:2..5021- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAGCAGTTAGTCCAACCTTTCTCCCATACGCACCACAACCGCTGAGAGA GGGAAAGAGAGACAAAACTCTTGCACAACATCCACAAGATCAGATGGGGA AGAACTACTACGACGTATTGGGGCTGCCCAAGGGCACCTCAGATGCCGCT AAGATCAAGAAGACCTACCGGAAGCTCGCTCTCCGGTTTCATCCAGACAA GCCAACGGGCGACACAGCCAAGTTCCAAGGTAGGTACTGGTACATTAGCC TACCCTAGTGCTGTATGCACGTGGTTTCTGTCCGAGCCACTGGGGGTTTG GGTGCTCGTTACGTTACGTACTGCCCTGTGCGACGAAAGGGCGGTGGACC TTTCTTTCTTACGCCTCAGTGCGCATTGCTCGCGTAGTGTGCATACACAT CAGGAGGTTCCCGGGTACCGCAGCTTTGTTTGCACGTCTCCTTTCTAGAA AATCTTTTGATTTCTACCGCTGTTCAAAAATAACCTAGTCGACCTCCCAC GGTGGTTCCCTGCTTGCCGTTCTCCCCGTGGTCACACCTCAGAAATCAGC GAGGCCTTCGAAGTGTTGAGCGACGACAAAAAGAAGAAGCTGTATGACCA GTTCGGCGAGGCTGGCCTAGGGGCTGGCGTTGGCGGGGGAGGCGGAGAGT CTTCGGAGGAAAGCGGCATCCCCTTCACGCGGTCGCGCGGAGCCTCGCCG TTCGGCGGTGGCGGGGGAGGGACTCACCAGACCTTTTCGTTCAGCACGGG CGGCGGCGGCGGCGGCGGAGGGTTCCAAGGGAGCGACCCTTTCAGCATTT TCGAGTCCATGTTCGGGACCGGAGACGTCAACGAAGGTGTGGGTGCGGGT GTGGCTCTTTATCAGGCTCGGGTGCGTGCTGTTGGATAGCCCTGTGCGCC CGGCGTAGTTGCAGACGGCAAAAAAACAAAACAACAGCTCACGCTGTGGA TTCACTGCTAATCTGTCTTGGACTTATTTCTATATATATCGATGGATTTG TTGTGTAATGTCAAGAAAAAAAAAACAGGGCGGCGAGTTTGCCGGCAACA ATAAAACAGAGAAAATCATCAGGGGGCGTAATAGCCCGCATCTGCGTTGT TCTTGAGCGTGAGCTCTGATGTGATGACCATGGTGGCGTGATAGCTTGGT GATGGCGTGATAGCTTGGTGATGGCGTGATAGCTTGGAGGCGTGACAACC TGGCAGCGTGATACACTGTAGTTGGTGGATACCTAGTATGGACACGGGCG TGATAGCCCAGGGCGTGGTGGCCGTGAAAAAGGTAAATGAATTATCCAAG GGCACGTGACCAACACCGTTCCGTTCCAGACACGCATACCCATTCAACAA CATTATGTGGCAAAGATGATACCACCATTCCCCCAATCAAGTAATCACAA CGCAGAACCCCAAATTCCCCGCTCCATCTCCTCGGAACGTTTCTCGGTTG CAACAATCTTTCAATTCTGTGAGTACATCCAACGCGTGCGTTGGTTCAAC AAAACGTTACCGTATAGTTGATGCCGATCTGTCTTCTTGTTCCTCTTTCT CCCGCCACCCACGGTGAAAAGCGGGTGTGCCTTAGAGCGTGTTCCACTTG AAACGGTTCGATAAGTCAGGCACGCACTCGGTGGCGGCTGTAAGTACGTC GTGCGTTTTGTCGGAACCTCCGTTTTGCATGCTTCCATCGAACGCCCTGT TAAGGTCTGTTCTGAACTCAGCCAGCGTGTCATCATAATGATTTCCGTTT CTCCTCGCTACACCTGCAGGCCACACATGCCTCATGAGTCTGTGGTTGAA GTTACGAAACTGCCAAGCGACACGATCGCAGCCTCTGCTGCTCTGAGTTA GGAGTGCGAGCACCTCTGGGACTCCGGGCGGAAATGATCACTCAATACTG CTGTACTTCAAATCATACCATAAACTCTGTCAGCACATCCACAAGCTGTG AAAGGCAAAGTAGGGTGTAGTAATGGTCGCTACCCGTCATGCGTTGGGCG AGAGGGTAGGAGGGGGACACTTGATGTCCTCCTGTATCTATGCGATTCGT CAATCCCTCTCCGATAGACAAAGATTGGGTACAGTGTACATCTAAGGAGG GGGGGGGGGGGGCAGACAAATGTTCGAGGTTATAGTACCCACATGTTCGA GAGCTGAAACTCTTGAGAAGCACTCGAACTGCGCAAAAATTCCCCCATGG ACATAACATCTATACTTTAAGCAACCGGCCGACTGCTTTTTCGCCACCGT CGCGCTCTGTATGTAGCAAGGCGTTGCTTTATACCGGTACTTTTGCAACG CGGGGTCAACAATTCAGGCAACCTGGTGTATTCCAATCCCCTTCTTGTTG ATGTTAGTGCTGCTCTGCTCTGTCGGTGTTGTGGCTGTCGTAGATTCTGA CCAGCTTCTCGAGTCCGCCATATGTTTTTTTTCCCTGTCCGCCCCTTCCT CCTAGTGCAAATCTCGCCCTATTGCAATGAAACGTCATGTTTCGTAGCGA ACTAGCCGACAACATTCACGCCTTTGCACCCACAACTGTATTATTTCCCC GCAAACGAAAATCGACCATACAAATCTCAGCCGTCGGCCGCGAGGGTTTC CCAATGGGGGCTGGCTTGAACGGGGTGCGAATGGGCGGCATGGGCGGTGG CTTCGGTGGAGGCATGCCGGCGGCAGGCTCTCCTTCCCCTCCGAAGGCGG CGAGGCGCCAGGCCCCGCCGGTGGAGCACTGCCTAAACCTGTCGCTGGAG GAGCTGTACAAGGGGTCCTCGAAGCGGATGAGAATCACTAAGAAGGTGAG AGATGTCATGTCATGTCATGTCATATGGTATGGTGCAGCAAAATGATAGC TTGCGTGTTTTTGGGGGCGGGCAAGGGAAGGAAGCAGCTTACCATTTCTC ATGTCGACGTTAGCCGCGCCAACATGCTGCGCTCTGAAAGGACGAGAATT TTTGCGGGGAAGTAAAAACCCCCCAAGAGCTTTCATATCAACAGACTTCG TTCCTCCCACGGTGTGTTTTTGCGTCATGATCTATTTTCTTGTTTTTCGG AAAGCCATTTTTGCTATACATGCATGAGTTCTCAGGGCTCGGGCCTTCGT CCTCTTCGCGTGGGCGTGCTTTCGGGTCCTCCCTTGTGCATACTACGCTT TTCCAGTAATTTGAAAGTGCTGTGCTGTGCAGTCGCCCTTCTTGCTGTTT GCTGTCGGGTGCTGCTTCTGTCTCTGTCTCTGTGTCTGTCTGTAGCCACC CGGACCTGGGGGTACGTCTCACCTGTTACTTGTCGAGCTGTCTCGGTCCC GAACAAGTGGGCCTACTATCTGGTTCTTAAGCTGGAGCTGTTCCCCCAAC GATGTTGTGTTGCTGTTGAATATGTTGTGGTTGAACGGATGGTTGTTTTC TCTCACCGACCGAATAGCAGCACCATTTTTCTCCCTCCCACAACGGAACA CTTCAACAGAACAACAGAACACTTCCAACTTCCCGAACAGATTGCTACGG ATTTGGGGTACTGCAAAAGCGAGATAAACCGACGACACCCCTTACGCCGC TTGTCGGTCAGCACGTGCAGACTCTCACACTCCCCCCTCCCCTCCGTGTT TTTTCCTATTTTTTTCCGACTAAAATGTAAAAAATGACACGATCGAACGA ATGAACCGGCCGCTTGGGGTGATGATAGCAGACCTCATCCGGGGAGACGC AAGTCGATAAGACGATTACCATCAAGCCCGGCTGGAAGGATGGGACGAAG ATCACGTACAAACAGGAGGGTGACGAGCAACCAGGAATGCTCCCGGCCGG TGAGGGTGTTTTTTCCGTTTGTAGGCGTTGTTTTCTTTTCTTTTTTTTTT GTACGCAGGCTCGATTACAGCTAGATCGCGTGCTGTGTAAAAAGGTGTGT GTTTGACCTCCGTTGGACTTTTGTAGAGCGTCGTCGGAAATGCGGCTTGG TCCATACATGTGTTGGTAGCGTCTGAGCATCGATCAGCTTTTTTCTTTGT GTCGTGCTCGCCTTGCGCCTTGATGTTCTCGAATTGAAAGCGTTGGGCCC CGTCGGAGGCACGCGCGCTAGGCACCCTCCCCTCCCCTCCCCAAATGTTT GTTGACTCTGGCGCTGTCTAGATATACAGGATTCATTCAGACACAGGGTC CAAACGTCACAGGGCACACCATGGTGTCTTTTTTCGTCCCTTTTGCGTGG TGTTTTATTTAGTTTGAGTGTCCCCGTGCGTCGAAATCTCATCCCACTTG TTTTGGCCCGGCAGATATTGTTTTCGTGATCAAGACCAAGCCTCACCCCA GGTTCACGAGGGAGGATCATGACCTCGTCTGCACCGTCATTATTACGCTG GAGCAGGCGTTGACAGGTGGGTGGGTGGATGCAAACAAGGCTAGTGCCGT CTGCATAGTTGTTATGGTCAATGTACTGTGGTGCGCAGCATGGATGAAAA TAGAAACAACATAAGGAAACGCACACACGCGGCAGTTTGGCGGTAAGACT CATGTCGTTTCGTTGGCCGATCGATTCAAGCGGTATCATAGATGTCGTTG AAAGAAATACGCGCACACACACGTGTACGCCCCAAACGTTCTTCTGCACT TTCTATTATTTCAAGAGCTCTTCAAAGGTGCTTGCATGTTAGCAATCAAG CTGCGCCTTGGATTTTCGTTACGAGTAGATATGACGTGCGTATAACTCGT GAAAGGCGTCCGAGTGGATCGTGGTGCAAACGCACGTGGGTTTGTACCGC TGTGAGGTACAAGAGCACGCCACTTTTCCACTTTCCACACTCACTCACGT GCATTGACGGACGAACGAACCAACGACCTAGCCGAACGTAACCGACGAAT AAATCGATGCACTTGCAGGCTTCACTATCCCGATCGACACCCTTGACGGT AGAAAGGTGATGGTTACGGAGCCAGGCCTCTCGACGTCCTCCCAGGAGAC CGTAGTTCGGGGAGAGGGGATGCCGTCCCAGAAGGACCAACGAGTACGAG GGAACCTCACCGTCAGGTAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7162:2..5021-

>mRNA_Ecto-sp13_S_contig7162.18271.1 ID=mRNA_Ecto-sp13_S_contig7162.18271.1|Name=mRNA_Ecto-sp13_S_contig7162.18271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1110bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7162:2..5021- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAGCAGTTAGTCCAACCTTTCTCCCATACGCACCACAACCGCTGAGAGA
GGGAAAGAGAGACAAAACTCTTGCACAACATCCACAAGATCAGATGGGGA
AGAACTACTACGACGTATTGGGGCTGCCCAAGGGCACCTCAGATGCCGCT
AAGATCAAGAAGACCTACCGGAAGCTCGCTCTCCGGTTTCATCCAGACAA
GCCAACGGGCGACACAGCCAAGTTCCAAGAAATCAGCGAGGCCTTCGAAG
TGTTGAGCGACGACAAAAAGAAGAAGCTGTATGACCAGTTCGGCGAGGCT
GGCCTAGGGGCTGGCGTTGGCGGGGGAGGCGGAGAGTCTTCGGAGGAAAG
CGGCATCCCCTTCACGCGGTCGCGCGGAGCCTCGCCGTTCGGCGGTGGCG
GGGGAGGGACTCACCAGACCTTTTCGTTCAGCACGGGCGGCGGCGGCGGC
GGCGGAGGGTTCCAAGGGAGCGACCCTTTCAGCATTTTCGAGTCCATGTT
CGGGACCGGAGACGTCAACGAAGCCGTCGGCCGCGAGGGTTTCCCAATGG
GGGCTGGCTTGAACGGGGTGCGAATGGGCGGCATGGGCGGTGGCTTCGGT
GGAGGCATGCCGGCGGCAGGCTCTCCTTCCCCTCCGAAGGCGGCGAGGCG
CCAGGCCCCGCCGGTGGAGCACTGCCTAAACCTGTCGCTGGAGGAGCTGT
ACAAGGGGTCCTCGAAGCGGATGAGAATCACTAAGAAGACCTCATCCGGG
GAGACGCAAGTCGATAAGACGATTACCATCAAGCCCGGCTGGAAGGATGG
GACGAAGATCACGTACAAACAGGAGGGTGACGAGCAACCAGGAATGCTCC
CGGCCGATATTGTTTTCGTGATCAAGACCAAGCCTCACCCCAGGTTCACG
AGGGAGGATCATGACCTCGTCTGCACCGTCATTATTACGCTGGAGCAGGC
GTTGACAGGCTTCACTATCCCGATCGACACCCTTGACGGTAGAAAGGTGA
TGGTTACGGAGCCAGGCCTCTCGACGTCCTCCCAGGAGACCGTAGTTCGG
GGAGAGGGGATGCCGTCCCAGAAGGACCAACGAGTACGAGGGAACCTCAC
CGTCAGGTAC
back to top