prot_Ecto-sp13_S_contig716.18268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig716.18268.1
Unique Nameprot_Ecto-sp13_S_contig716.18268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length562
Homology
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A6H5KM69_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM69_9PHAE)

HSP 1 Score: 714 bits (1844), Expect = 2.500e-253
Identity = 477/573 (83.25%), Postives = 482/573 (84.12%), Query Frame = 0
Query:    1 MASSTGDSSNVVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNLSRPVKSIGGGAA-------GSWSSAKSLQGGGSADGDGVTGDADEAAGDGEPQCREKKG-NHRERLQQRCRQQQSQPGECGGIGSGGRGGGAPTSSSSLQGPPKMKMLRIFRGDKTTVWCESRLSVRNAKSQDGSSTAAPVPLEIILTLRTVAEGGKTAVAREFAGGQLSMATGPSSVPAGETCIGTGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGTTGGAGKGNHAVVTPSPRGFSGESAKQGPEATGTPKMARAA----EAADPAVGREERSLSKKRQRVSLSNRMDEELSRGXXXXXXXXXXXXXXXXXXXXXXXXXSTTHEGSVSCSNEADSTGEGSNNEGSSKWGDGDGGGGVNAPEGRDSYRHCGNSSEDGDGDVDGVSEEGTSAEGTEFGDDVQTAVQSLILMGGDYSNKAAQ 561
            MASSTGDSS+VVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNLSRPVKSIGGGAA       GSWSSAKSLQG GS              GDGEPQCREKKG NHRER QQRCRQ QSQPGECGGIG+GGRGGGAPTSSS LQGPPKMKMLR+FRGDKTTVWCE RLSVRNAKS DG STAAPVPLEI+LTLRTVAEGGKTAVAREFAGGQLSMATGPSS  AG+ C G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 PSPRGFSG S KQ PEATGTPKMA AA    EAADPAVGREERSLSKKRQRVSLSNRMDEELS    XXXXXX                  TTHEGSVSCSNEADSTGEG NNEGSSKWGDGDGGGGVNAPEGRDSYR CGNSSEDGD DVDGVSEE TSA  TEFGDDVQ AVQSLILMGGDYSNKAAQ
Sbjct:    1 MASSTGDSSSVVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNLSRPVKSIGGGAAAAGRRAAGSWSSAKSLQGEGSXXXXXXXXXXXXXXGDGEPQCREKKGGNHRERPQQRCRQPQSQPGECGGIGNGGRGGGAPTSSS-LQGPPKMKMLRVFRGDKTTVWCEGRLSVRNAKSHDGYSTAAPVPLEIVLTLRTVAEGGKTAVAREFAGGQLSMATGPSSASAGKACAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPRGFSGASVKQEPEATGTPKMAGAAXXXXEAADPAVGREERSLSKKRQRVSLSNRMDEELS---GXXXXXXADKCGEDNSSTGGDTGGFTTHEGSVSCSNEADSTGEGWNNEGSSKWGDGDGGGGVNAPEGRDSYRDCGNSSEDGDRDVDGVSEESTSAGRTEFGDDVQNAVQSLILMGGDYSNKAAQ 569          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A835Z3F0_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.350e-25
Identity = 60/108 (55.56%), Postives = 85/108 (78.70%), Query Frame = 0
Query:   24 EHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNLS 131
            + RR +EK+ +KRAANRKSAS SRARKK +V++MT +NERM+++A +L++LPDL++A+ R G ++YVS AC+ LL  S EDM G ++F LV P+CH  LR +I+D LS
Sbjct:   35 DRRRMEEKKLLKRAANRKSASASRARKKTFVEEMTIENERMRRNAQILALLPDLIVALSRAGAVSYVSGACETLLQRSTEDMRGTSLFALVTPDCHDTLRALIADTLS 142          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A835Z9B4_9STRA (BZIP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.870e-23
Identity = 48/93 (51.61%), Postives = 73/93 (78.49%), Query Frame = 0
Query:   34 VKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKII 126
            +KRAANRKSAS SRARKK +V++M+ +N+RM+++A +L++LPDL++A+CR G ++YVS AC+  L    E+M G ++F+LV PECH  L  ++
Sbjct:    1 LKRAANRKSASASRARKKTFVEEMSIENDRMRRNAQILALLPDLIVALCRRGTVSYVSGACEAFLQKRSEEMRGMSMFDLVTPECHGALSLLL 93          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A7S4VJ34_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VJ34_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.330e-16
Identity = 48/108 (44.44%), Postives = 75/108 (69.44%), Query Frame = 0
Query:   21 IIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISD 128
            ++ E RR++EKR  KR ANRKSA TSRARKKA V++MT  N R+++ AL+L++LPDLV+A+   G +T+ S   + +L H  ED+ G+N+ +++ P     LR ++ +
Sbjct:   41 LLAEARRREEKRTAKRVANRKSACTSRARKKALVEEMTRTNARLRRQALILALLPDLVIAITIDGTITFCSAQVERVLRHKEEDLVGSNLNDVLMPLSRGALRHLVKE 148          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A7S2UHM5_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHM5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.580e-16
Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   21 IIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISD 128
            ++ + R+++EKR  KR ANRKSA TSRARKKA V++MT  N R+++ A++LS+LPD+V+A+   GE+T+ S   + +L H   D+ GA + +++ P     L ++ SD
Sbjct:  399 LLADARKKEEKRTAKRVANRKSACTSRARKKALVEEMTKTNARLRRQAMILSLLPDMVVAITEDGEITFCSAQVERILRHPVTDLVGAKLTDILVPSSREALDRLTSD 506          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A7S4W8D6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W8D6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.590e-16
Identity = 48/105 (45.71%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   24 EHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISD 128
            E RR++EKR  KR ANRKSA TSRARKKA V++MT  N R+++ AL+L++LPDLV+A+   G +T+ S   + +L H  ED+ G+N+ +++ P     LR ++ +
Sbjct:    1 EARRREEKRTAKRVANRKSACTSRARKKALVEEMTRTNARLRRQALILALLPDLVIAITIDGTITFCSAQVERVLRHKEEDLVGSNLNDVLMPLSRGALRHLVKE 105          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: K0SE11_THAOC (PAS domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SE11_THAOC)

HSP 1 Score: 93.2 bits (230), Expect = 4.100e-16
Identity = 47/123 (38.21%), Postives = 82/123 (66.67%), Query Frame = 0
Query:   21 IIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNLSRPVKSIGGGAAG 143
            ++ + RR+ +KR  KR ANR+SA+TSR RKK  +++MT  N R+++HAL+LS LPD V+++   G++T+ +   + +L H  ED+ GANI +++ P    ++R++I D +    +++G G  G
Sbjct:  338 LLADARRKADKREAKRLANRRSAATSRNRKKMLIEEMTRDNARLRRHALILSYLPDPVVSISLEGDITFCNMQLERVLKHPIEDLIGANIEDIMVPSSRKIVRRLIRDLVIAEQRALGNGEEG 460          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A7S2V9B7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9B7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.970e-16
Identity = 48/109 (44.04%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   18 LSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKII 126
            +S ++ + +R+ +KR  KR ANRKSASTSRARKKAYV +MT  N R+K+ AL+LS+LPD+V+A+  +G++T+ S   + +L     ++ GAN+  L+ P     L ++I
Sbjct:  244 VSLLLADAKRKADKRNAKRIANRKSASTSRARKKAYVQEMTELNARLKRQALILSLLPDMVIAIGESGDITFCSAQVERVLRFDSAELVGANLSNLLVPSSKEKLNRLI 352          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: D7FNF3_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF3_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 8.830e-16
Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 0
Query:   34 VKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNL 130
             KRAANR+SA+T R RKK +V++M   NERM++ A VLS+LPD++LA+ R G +TY S  C+  L  + +++ G NIF+LV    H  LR+++ +NL
Sbjct:   53 AKRAANRRSANTCRLRKKFFVENMADANERMRKRARVLSLLPDMILAMRRDGVITYASENCRQFLQFTRQEVEGTNIFDLVESGSHNRLRRLLEENL 149          
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Match: A0A6H5KPQ7_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 8.950e-15
Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = 0
Query:   34 VKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNL 130
             KRAANR+SA+T R RKK +V++M   NERM++ A VLS+LPD++LA+ R G +TY S  C+  L  + +++ G NIF+LV    H  L +++ +NL
Sbjct:   69 AKRAANRRSANTCRLRKKFFVENMADANERMRKRARVLSLLPDMILAMRRDGVITYASENCRQFLQFTRQEVEGTNIFDLVESGSHNRLWRLLEENL 165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig716.18268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KM69_9PHAE2.500e-25383.25PAS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z3F0_9STRA1.350e-2555.56PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z9B4_9STRA4.870e-2351.61BZIP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S4VJ34_9STRA1.330e-1644.44Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S2UHM5_9STRA2.580e-1642.59Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S4W8D6_9STRA2.590e-1645.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SE11_THAOC4.100e-1638.21PAS domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S2V9B7_9STRA4.970e-1644.04Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
D7FNF3_ECTSI8.830e-1647.42PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KPQ7_9PHAE8.950e-1546.39PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 65..131
e-value: 0.002
score: 27.4
IPR000014PAS domainPROSITEPS50112PAScoord: 63..133
score: 10.779
NoneNo IPR availableGENE3D3.30.450.20coord: 57..202
e-value: 2.1E-10
score: 42.3
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 31..68
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 35..49
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 62..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig716contigEcto-sp13_S_contig716:17842..20695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig716.18268.1mRNA_Ecto-sp13_S_contig716.18268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig716 16906..22136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig716.18268.1 ID=prot_Ecto-sp13_S_contig716.18268.1|Name=mRNA_Ecto-sp13_S_contig716.18268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
MASSTGDSSNVVGSGFELSRIIEEHRRQDEKRRVKRAANRKSASTSRARK
KAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLH
SPEDMTGANIFELVAPECHPLLRKIISDNLSRPVKSIGGGAAGSWSSAKS
LQGGGSADGDGVTGDADEAAGDGEPQCREKKGNHRERLQQRCRQQQSQPG
ECGGIGSGGRGGGAPTSSSSLQGPPKMKMLRIFRGDKTTVWCESRLSVRN
AKSQDGSSTAAPVPLEIILTLRTVAEGGKTAVAREFAGGQLSMATGPSSV
PAGETCIGTGAPAPAPANADDADREEEAEEEYVEADDDGYQCEVEAAEED
SNNSGSGNDSGTTGGAGKGNHAVVTPSPRGFSGESAKQGPEATGTPKMAR
AAEAADPAVGREERSLSKKRQRVSLSNRMDEELSRGGGGGGGGSADKSGG
DNSSTGGDTGGSTTHEGSVSCSNEADSTGEGSNNEGSSKWGDGDGGGGVN
APEGRDSYRHCGNSSEDGDGDVDGVSEEGTSAEGTEFGDDVQTAVQSLIL
MGGDYSNKAAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR004827bZIP
IPR035965PAS-like_dom_sf