prot_Ecto-sp13_S_contig12164.1826.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12164.1826.1
Unique Nameprot_Ecto-sp13_S_contig12164.1826.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: D7G0Y5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Y5_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.310e-44
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
Query:    1 MKEGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            MKEGLLSMVRNADAQGDSRFFISIKDDAGWAD+RYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML
Sbjct:  190 MKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 264          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A835YNC6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.750e-24
Identity = 45/73 (61.64%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    3 EGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            EG++SMVR  D + DSRFFI+IK DAGWAD RYVAFGR+ EG+D +  I+++KV+  +N+P KPVVIE+C ML
Sbjct:  112 EGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVML 184          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A6V1WNP3_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WNP3_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 3.640e-19
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    4 GLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            GL+SM R  D + DSRFFI  + DAGWAD +YVAFG++ EG  VV  IE++K +   N P K VVIE CG+L
Sbjct:  160 GLVSMARGLDGKTDSRFFIQTQGDAGWADGKYVAFGKVTEGFTVVQEIEKLKTQPPQNNPTKKVVIEDCGVL 231          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A6V2NXR4_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXR4_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.470e-19
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    2 KEGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            K+GL+SMVR+     DSRFFI+  DDAGWAD++Y AFG + +GMD V  IE+V V    N PK PV I  CG+L
Sbjct:  157 KKGLVSMVRSLSGGVDSRFFINCNDDAGWADDKYAAFGIVEDGMDYVKKIEKVSVSPPKNSPKTPVTIIGCGVL 230          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A7S4MQY5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQY5_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.170e-18
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    2 KEGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            K GL+SMV++     DSRFFI+IKDDAGWAD+RY AFG + EGMD+V  IE+V V    N PK  + I++ G+L
Sbjct:  206 KAGLVSMVKDKSGGADSRFFITIKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVSRPKNTPKVAISIQRSGLL 279          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: B8C839_THAPS (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C839_THAPS)

HSP 1 Score: 81.3 bits (199), Expect = 1.520e-17
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    3 EGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAE-----GMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            +GL+S VRNA+   DSRFFI  +DDAGWAD+RY AFG + E     GM++V  + R++V+   N PK PV+I  CG+L
Sbjct:  101 KGLVSAVRNANGTIDSRFFIQTEDDAGWADDRYAAFGIVLEEEGTGGMELVKKLSRLEVKAPQNSPKDPVLIVGCGLL 178          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A7R9W6P2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6P2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.060e-17
Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    2 KEGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            K GL+SMVR+     DSRFFI++KDDAGWAD+RY AFG + EGMD+V  IE+V V    N PK  V I   G +
Sbjct:  113 KAGLVSMVRDKTGGVDSRFFINLKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVARPKNTPKVAVRITGSGFV 186          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A5J4Z0I4_PORPP (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0I4_PORPP)

HSP 1 Score: 78.6 bits (192), Expect = 1.800e-16
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    4 GLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            GL+SM    D + DSRF I  K D+G+ D RY+AFGR+ EGM V++ +E +   G  N+PK+PV I  CG+L
Sbjct:   90 GLISMCHARDGKADSRFLIQTKADSGYLDGRYIAFGRVLEGMSVIYHMEEIGGVGPQNRPKQPVTIVDCGLL 161          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: A0A4D9CTD0_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTD0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.020e-16
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 EGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            EG+LSMV +     DSRFFI++  D  WAD RYVAFGR+ +G++V+  +E+V+V+  +N P  P+ I   G+L
Sbjct:   35 EGMLSMVNDKSGMVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 107          
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Match: K8YUC4_NANGC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUC4_NANGC)

HSP 1 Score: 75.1 bits (183), Expect = 1.020e-14
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 EGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 75
            EG+LSMV +     DSRFFI++  D  WAD RYVAFGR+ +G++V+  +E+V+V+  +N P  P+ I   G+L
Sbjct:  162 EGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 234          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12164.1826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Y5_ECTSI1.310e-4498.67Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835YNC6_9STRA1.750e-2461.64Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A6V1WNP3_HETAK3.640e-1955.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hetero... [more]
A0A6V2NXR4_9STRA7.470e-1955.41Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylu... [more]
A0A7S4MQY5_9STRA1.170e-1855.41Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odonte... [more]
B8C839_THAPS1.520e-1751.28Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A7R9W6P2_9STRA5.060e-1755.41Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudi... [more]
A0A5J4Z0I4_PORPP1.800e-1648.61Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphy... [more]
A0A4D9CTD0_9STRA5.020e-1646.58PPIase cyclophilin-type domain-containing protein ... [more]
K8YUC4_NANGC1.020e-1446.58Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 2..73
e-value: 4.3E-17
score: 62.8
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 1..74
score: 14.12
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 1..75
e-value: 8.0E-20
score: 73.3
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 3..75
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 3..74
NoneNo IPR availablePANTHERPTHR11071:SF471PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTICcoord: 3..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12164contigEcto-sp13_S_contig12164:31..651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12164.1826.1mRNA_Ecto-sp13_S_contig12164.1826.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12164 25..651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12164.1826.1 ID=prot_Ecto-sp13_S_contig12164.1826.1|Name=mRNA_Ecto-sp13_S_contig12164.1826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
MKEGLLSMVRNADAQGDSRFFISIKDDAGWADNRYVAFGRIAEGMDVVHL
IERVKVEGGTNKPKKPVVIEKCGML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf