mRNA_Ecto-sp13_S_contig7158.18264.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7158.18264.1
Unique NamemRNA_Ecto-sp13_S_contig7158.18264.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A6H5KY19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY19_9PHAE)

HSP 1 Score: 545 bits (1403), Expect = 2.510e-177
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQR+WLYLEGIFFASRDIK
Sbjct:  965 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRRWLYLEGIFFASRDIK 1245
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: D8LRI5_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI5_ECTSI)

HSP 1 Score: 543 bits (1399), Expect = 2.560e-171
Identity = 279/281 (99.29%), Postives = 281/281 (100.00%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSL+AVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQR+WLYLEGIFFASRDIK
Sbjct: 1339 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLEAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRRWLYLEGIFFASRDIK 1619
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A7S4W182_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W182_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.070e-83
Identity = 144/282 (51.06%), Postives = 201/282 (71.28%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERD-VLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A++ L +FE    K + + + L  A+DAL LE    D  +     E+TD++EVW+A++  +ES+ E+++TPWSTAV RKIRK+LD +   +R+LPNRVRQY+ F H   T++       LL+++++EALKDRHW+ +L RLGI V F EL +G+LW   ++  KK + E +  AQGEMALE FL QVR+ W  +EL+LV YQ RI+L++GWD +F+ L++H+ GL  M++SP++ AV+EFQEE  LWEERLTKL    DAWVDVQR+W+YLEGIFF S DIK
Sbjct:  220 AIDILTKFEFDMKKAKLDHENLIKAKDALGLEVATGDSAVSDCLDELTDMKEVWEAVTGPYESLEEVKDTPWSTAVTRKIRKALDDIMADLRSLPNRVRQYDAFTHLNDTIKGYLSGYGLLSDMKTEALKDRHWKTILSRLGIHVPFTELTVGMLWDKGIINRKKEMHEILTVAQGEMALEVFLSQVRDRWIKQELDLVLYQNRIRLIRGWDDLFTTLDDHMGGLILMKSSPYYRAVREFQEEGNLWEERLTKLRGAFDAWVDVQRRWVYLEGIFFGSADIK 501
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A7S2A5L9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5L9_9STRA)

HSP 1 Score: 284 bits (727), Expect = 2.150e-81
Identity = 144/282 (51.06%), Postives = 201/282 (71.28%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERD-VLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A++ L +FE    K + + + L  A+DAL LE    D  +     E+TD++EVW+A++  +ES+ E+++TPWSTAV RKIRK+LD +   +R+LPNRVRQY+ F H   T++       LL+++++EALKDRHW+ +L RLGI V F EL +G+LW   ++  KK + E +  AQGEMALE FL QVR+ W  +EL+LV YQ RI+L++GWD +F+ L++H+ GL  M++SP++ AV+EFQEE  LWEERLTKL    DAWVDVQR+W+YLEGIFF S DIK
Sbjct:  720 AIDILTKFEFDMKKAKLDHENLIKAKDALGLEVATGDSAVSDCLDELTDMKEVWEAVTGPYESLEEVKDTPWSTAVTRKIRKALDDIMADLRSLPNRVRQYDAFTHLNDTIKGYLSGYGLLSDMKTEALKDRHWKTILSRLGIHVPFTELTVGMLWDKGIINRKKEMHEILTVAQGEMALEVFLSQVRDRWIKQELDLVLYQNRIRLIRGWDDLFTTLDDHMGGLILMKSSPYYRAVREFQEEGNLWEERLTKLRGAFDAWVDVQRRWVYLEGIFFGSADIK 1001
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: B7GDZ2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDZ2_PHATC)

HSP 1 Score: 276 bits (705), Expect = 1.850e-78
Identity = 139/282 (49.29%), Postives = 197/282 (69.86%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLE-PIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A+E L +FE    K     + L  A+DAL LE   E   +     E+TDL+EVWDAM + + S+ E+++T WSTAV RKIR++LD +   MR+LPNR+RQY+ +      ++   E   LL++L+SEALK+RHW+ + +RLGIRV F +L +G+LW + ++  KK + E +  AQGEMALE FL +VR+ W  +ELELV +Q R +L++GWD +F+ L++H+ GL  M++SP++ AV+EFQEE  LWE+RLT+L A  DAWVDVQR+W+YLEGI F S DIK
Sbjct: 1051 AIEVLSKFEINLTKAHVHQENLGRAKDALGLEHTTESHEVVESLKELTDLKEVWDAMMEPYRSLEEIKDTLWSTAVMRKIRRALDDILASMRSLPNRIRQYDAYTQLHAVVKGYIEGHSLLSDLKSEALKERHWKTIFQRLGIRVPFIDLTVGILWENGILTRKKDVSEILTVAQGEMALEVFLSEVRDRWLKQELELVLFQNRTRLIRGWDDLFATLDDHIGGLALMKSSPYYRAVREFQEEGKLWEDRLTQLRAAFDAWVDVQRRWVYLEGILFGSSDIK 1332
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A7S2VYX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYX9_9STRA)

HSP 1 Score: 265 bits (676), Expect = 3.260e-76
Identity = 136/282 (48.23%), Postives = 192/282 (68.09%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERD-VLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A E L +FE    K + + + +  A+DAL LE    D  +     E++DL+EVW ++S  + ++ +L+ETPW+TA  RKIR+ L+ +   +R LPNRVRQ+E + H   T++       +L+EL++EALK+RHW+ +L  LGI   F EL +G+LW + LM  KK + E +  AQGEMALE FL QVR+ W  +EL+LV YQ R++L+KGWD +F  L++H+ GL  MR+SP++  V+EFQEE  LWE+RLTKL    D+WVDVQR+W+YLEGIFF S DIK
Sbjct:  393 ANEILTKFEFNMKKSKLDYENILKAKDALGLEATATDSAISDCIDEVSDLKEVWQSVSGPYATLEKLKETPWATAATRKIRQGLEDINAELRALPNRVRQFEAYTHFNNTIKNYLGGHGILSELKTEALKERHWKLILSNLGIHTLFVELTVGMLWENGLMYRKKEMNEILTVAQGEMALEVFLNQVRDRWMKQELDLVLYQNRVRLIKGWDVLFGTLDDHMGGLVLMRSSPYYRTVREFQEEGKLWEDRLTKLRGAFDSWVDVQRRWVYLEGIFFGSADIK 674
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A7S1FT33_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT33_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.240e-76
Identity = 134/281 (47.69%), Postives = 189/281 (67.26%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A+  L +FE    K  ++ + LS A+DAL LEP   ++L     E+  L+EVW A+  +W  I EL E  WS+ VPRK+R++L+ +   +R LP RVRQY+P+ + Q   +       +L +L+++ALK+RHW+ +L RLGIRV   +L LG LW   ++  KK + E +  AQGEMALEE+LRQ+RE W  REL+LV YQ R++LV+GWD +F  L++H +GL  M++SP++  V EFQEE  LWE+RLTKL  + DAW+DVQR+W+YLE IFF   DIK
Sbjct: 1048 AMAILAKFEVAMRKACADFEGLSRAKDALELEPSGMNILCEGLEELEGLKEVWLAVQGIWTKIDELNEVSWSSIVPRKVRQALEDILSSLRTLPARVRQYDPYIYVQDYSKKLLSGNAVLGDLKTDALKERHWKTILSRLGIRVSMTDLTLGHLWKGGVLTRKKDMAEILSTAQGEMALEEYLRQIRETWSKRELDLVLYQNRVRLVRGWDLLFQTLDDHSSGLALMKSSPYYRTVAEFQEEGTLWEDRLTKLRFIFDAWIDVQRRWVYLENIFFGGADIK 1328
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A1Z5KS06_FISSO (Dynein heavy chain 1, cytosolic n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS06_FISSO)

HSP 1 Score: 266 bits (681), Expect = 2.900e-75
Identity = 136/283 (48.06%), Postives = 199/283 (70.32%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLEPIER--DVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A+E L ++E    K     + L  A+DAL LE + +  D++  +  E++DL+EVW AM + +ES+ ++++T WS+ V RKI++ LD +   MR+LPNRVRQYE + H    ++       L+++L+++ALK+RHW+ +L+RLGIR+   +L LGLLW + ++  KK I E +  AQGEMALE FL QVR+ W  +EL+LV +Q R +L++GWD +F+ L++H+NGL  M++SP + AV+EFQEE  LWE+RLTKL A  DAWVDVQR+W+YLEGI F S DIK
Sbjct: 1233 AMELLAKYEIDLNKAHIHQENLVKAKDALGLEHMVQANDIIAALN-ELSDLKEVWQAMMEPFESLQQIKDTLWSSVVTRKIKRGLDDLLASMRSLPNRVRQYEAYTHLHDAVKDFIAGHGLMSDLKTDALKERHWKMILQRLGIRIPLADLTLGLLWENGVLTRKKEISEILSMAQGEMALEVFLTQVRDRWTKQELDLVLFQNRTRLIRGWDELFATLDDHINGLVQMKSSPFYRAVREFQEEGKLWEDRLTKLRAAFDAWVDVQRRWVYLEGILFGSSDIK 1514
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BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A7S0F805_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7S0F805_9STRA)

HSP 1 Score: 266 bits (679), Expect = 5.230e-75
Identity = 131/282 (46.45%), Postives = 195/282 (69.15%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSLE-PIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIRVGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            A+  L +FET   K ++  + L  A+DAL LE   E + +     E+ DL+EVW A+SK ++ +  +++  W++A+ RK+R++LD +   MR++PNR+RQYEPF      +R       L+TEL++EALK+RHW+ +L+ LG  + +Q+L +G LW   ++  KK IGE +  AQGEMALE+FL QVR+ W  +ELELV +Q R++L++GWD +F  L++H++GL  M++SP++ AV+EFQEE  LWE RLT+L A  D W+DVQR+W+YLEGI F S DIK
Sbjct:  966 AMNLLAKFETGLRKAQTHQENLVRAKDALGLEHTAESNAVSECVEELDDLKEVWSAVSKPYDKLQTIKDQSWASAIMRKVRRALDDLLAEMRSMPNRIRQYEPFITLHDEVRGYINGHGLMTELKTEALKERHWKTILKTLGSPLVYQQLTVGSLWDKGVLNRKKEIGEILTVAQGEMALEQFLAQVRDRWMKQELELVLFQNRVRLIRGWDDLFDSLDDHISGLALMKSSPYYKAVREFQEEGKLWETRLTQLRAAFDVWIDVQRRWVYLEGILFGSSDIK 1247
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Match: A0A7S2RFA5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFA5_9STRA)

HSP 1 Score: 266 bits (679), Expect = 5.390e-75
Identity = 141/285 (49.47%), Postives = 201/285 (70.53%), Query Frame = 1 
Query:    1 ALETLGRFETMTAKLESESKLLSAARDALSL--EPIER-DVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTELRSEALKDRHWRPLLRRLGIR-VGFQELNLGLLWGSALMGHKKGIGETVLAAQGEMALEEFLRQVREDWQGRELELVSYQGRIQLVKGWDAVFSRLEEHLNGLQSMRASPHFHAVQEFQEEAALWEERLTKLNAVLDAWVDVQRKWLYLEGIFFASRDIK 843
            AL  L  FE    +L+ E + + +A++ALSL  +P E  D+L  + +E+T L+EVW ++S V  SISEL+E PW+  VP+K+R SLD + EG+R LP RV+QYE FE  Q T+R   ++  L+ +LRSEALKDRHWR +++ LG++ + F+++ LG LW S L  H+K + +    AQGEM LEEFLRQ+RE W G E +L++YQ R +L++GWD +F++L+EH   L SMR SP+F AV  F+EEA+ WE++LT++  VLD W+DVQR+W+YL GI   S DIK
Sbjct: 1274 ALNKLSVFEIRATRLQEEWRRVDSAKEALSLARDPGENGDMLETISSELTSLKEVWTSLSVVGASISELKELPWTAVVPKKLRASLDEILEGLRKLPARVKQYEAFEFIQSTVRDYKKTQTLIVDLRSEALKDRHWRQVVKLLGLQNIVFKDMTLGDLWRSDLKKHQKKLSDIFRTAQGEMGLEEFLRQIREFWSGAEFDLINYQNRCRLIRGWDELFTQLDEHTTSLVSMRQSPYF-AV--FEEEASGWEDKLTRIRVVLDIWIDVQRRWVYLGGILLGSADIK 1555
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7158.18264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY19_9PHAE2.510e-17799.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRI5_ECTSI2.560e-17199.29Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S4W182_9STRA5.070e-8351.06Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2A5L9_9STRA2.150e-8151.06Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7GDZ2_PHATC1.850e-7849.29Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2VYX9_9STRA3.260e-7648.23Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1FT33_9STRA6.240e-7647.69Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1Z5KS06_FISSO2.900e-7548.06Dynein heavy chain 1, cytosolic n=2 Tax=Fistulifer... [more]
A0A7S0F805_9STRA5.230e-7546.45Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S2RFA5_9STRA5.390e-7549.47Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7158contigEcto-sp13_S_contig7158:895..6754 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score300.1
Seed ortholog evalue6.2e-79
Seed eggNOG ortholog2880.D8LRI5
Model size1332
KEGG koko:K10413
KEGG Pathwayko04145,ko04962,ko05132,map04145,map04962,map05132
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000166,GO:0000235,GO:0000278,GO:0000280,GO:0000741,GO:0000742,GO:0000746,GO:0000747,GO:0000819,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005816,GO:0005818,GO:0005819,GO:0005856,GO:0005868,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005938,GO:0006810,GO:0006928,GO:0006996,GO:0006997,GO:0007017,GO:0007018,GO:0007049,GO:0007059,GO:0007080,GO:0007097,GO:0007127,GO:0007129,GO:0008144,GO:0008150,GO:0008569,GO:0008608,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019953,GO:0022402,GO:0022414,GO:0030286,GO:0030473,GO:0030554,GO:0030705,GO:0030863,GO:0030981,GO:0030989,GO:0031134,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0035974,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044703,GO:0044764,GO:0045132,GO:0045143,GO:0045503,GO:0045505,GO:0046907,GO:0048284,GO:0048285,GO:0050000,GO:0051179,GO:0051234,GO:0051276,GO:0051303,GO:0051310,GO:0051315,GO:0051321,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0051704,GO:0051959,GO:0061982,GO:0070192,GO:0071840,GO:0071944,GO:0072384,GO:0072687,GO:0097159,GO:0097367,GO:0098813,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0140013,GO:0140014,GO:1901265,GO:1901363,GO:1902494,GO:1903046,GO:1903047,GO:1990574,GO:1990758,GO:1990939
Exons9
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
Cds size471
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7158.18264.1prot_Ecto-sp13_S_contig7158.18264.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7158 4380..6754 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463980.9558325-UTR-Ecto-sp13_S_contig7158:894..10471681463980.9558325-UTR-Ecto-sp13_S_contig7158:894..1047Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7158 895..1047 +
1681463980.96813-UTR-Ecto-sp13_S_contig7158:1729..18971681463980.96813-UTR-Ecto-sp13_S_contig7158:1729..1897Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7158 1730..1897 +
1681463980.9780416-UTR-Ecto-sp13_S_contig7158:2197..24311681463980.9780416-UTR-Ecto-sp13_S_contig7158:2197..2431Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7158 2198..2431 +
1681463980.9887736-UTR-Ecto-sp13_S_contig7158:2947..31031681463980.9887736-UTR-Ecto-sp13_S_contig7158:2947..3103Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7158 2948..3103 +
1681463980.999183-UTR-Ecto-sp13_S_contig7158:3663..37941681463980.999183-UTR-Ecto-sp13_S_contig7158:3663..3794Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7158 3664..3794 +
1681463981.0098562-UTR-Ecto-sp13_S_contig7158:4361..43791681463981.0098562-UTR-Ecto-sp13_S_contig7158:4361..4379Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7158 4362..4379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463981.02001-CDS-Ecto-sp13_S_contig7158:4379..44151681463981.02001-CDS-Ecto-sp13_S_contig7158:4379..4415Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7158 4380..4415 +
1681463981.030979-CDS-Ecto-sp13_S_contig7158:5438..55401681463981.030979-CDS-Ecto-sp13_S_contig7158:5438..5540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7158 5439..5540 +
1681463981.0438023-CDS-Ecto-sp13_S_contig7158:6168..63011681463981.0438023-CDS-Ecto-sp13_S_contig7158:6168..6301Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7158 6169..6301 +
1681463981.0530677-CDS-Ecto-sp13_S_contig7158:6554..67541681463981.0530677-CDS-Ecto-sp13_S_contig7158:6554..6754Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7158 6555..6754 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7158.18264.1

>prot_Ecto-sp13_S_contig7158.18264.1 ID=prot_Ecto-sp13_S_contig7158.18264.1|Name=mRNA_Ecto-sp13_S_contig7158.18264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp
MRRVAHKPNIMEVLSMENLLRQLERQEGLMSHIQKALGEYLEGQRQAFSR
FYFVGDEDLLEIVGNANEPAKVAQHLGKMFASVGALNMPTGGDDGKAGSA
LSMISKDGEEVAFKTPVNVADNGVKEWLKALETEMRSTLALLLRQAVAAT
GDLSTSR
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mRNA from alignment at Ecto-sp13_S_contig7158:895..6754+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7158.18264.1 ID=mRNA_Ecto-sp13_S_contig7158.18264.1|Name=mRNA_Ecto-sp13_S_contig7158.18264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5860bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7158:895..6754+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCTGGAGACCCTCGGCCGTTTTGAGACCATGACTGCCAAGCTAGAGTC
CGAAAGCAAGCTCCTGTCGGCGGCCAGAGATGCCCTGTCTCTCGAACCCA
TAGAGCGGGACGTGCTGGGACCCATGCAGGCCGAGATCACTGACCTTCGA
GAGGTGAGATTGGGTGGGGCAGGATCAGGGTTGAGGTCTAATGGAAAACT
CTGAGAAGGTCGAGTTTGGACGGGGCCGAGTCGGGGGTGCAGAGCCGAAA
CACACCCAAGCATATCCTGTTTCATTTGCTGCTATTTGTGTTCTCAACAG
TGCGAGTGAGCGTAAGGTCAGGGCAATCACGTATTGGAAGTCTCACATCC
CCCACACCGCTTCTATGCTTCGTAGTATCCACTCTCCCAACCTTTTTTGT
TTTCCTTAAGGACCCAATCGCCCATGGGTCGCACAATCTAGTACCTCCCC
TCCAATCACCCTAAACGTGATCTGCAGGCACCCTCTCTGATCACGTCGAC
TCTTGGGGATATTTCGCACATGTCAGAGTTTGGGCCTTTATTCTGTTAGT
GCTCTGTTGAAGGGTTGAGTCGGAAGATTGAGGAGTGAGCAGGCAGCCTG
TGGTAATGCCCATCTGCGTCAATAGTGTCGAAGGCGGTTGTGATACGGCT
CTTATAATTGTTGCGTTGTTCGTGTTTCGGTACTGCCCTCTCCACCAACA
TACTAACAAATACCCCGAGAGCACGCTCGAGGACAGTATCGACCGACTGG
ATTTCCCCGCATCTACTCATGAGAGAATGTGAACCGTGTTCTTACGATCG
GTTGCGTTTTCGATACGTAACCGTCTTGAGGGCAGGTGTGGGACGCCATG
TCGAAGGTGTGGGAGAGCATCTCCGAGCTGGAGGAGACCCCGTGGTCTAC
CGCCGTTCCCAGGAAGATCCGCAAGTCGCTCGACGCCGTTCAGGAAGGGA
TGCGCAACCTGCCAAACAGGGTCCGCCAGTACGAGCCGTTCGAGCATGCA
CAGGTGTGTGCCAATTGTCGTATGGCTTTAGTTGATTTTTTTCTTGAATG
TGTTTGTTTTGGCAGACATGTGAGTGCGTCGATTGCCGTGCAAGGCCCGT
CAGCACAAGTCATTCTTTATGCCAAGTGTTGTTGGTATTTTCATGTGGTG
TTTTTTTTATTGCGTACGTGTGTTGGTTCGGGCAGATGCGTGGTTGTTTT
GATTGCTGCAACGCGCAACATTCTGAGGAATTTTGGAAGCAACAATTTTC
GCTAACGATGCTGGTCCCAAATGCAAAACACATGGTGTGATGGATCGTCG
CAGATGACCTTACGGGCGAGGTCCGAGTCTCTGCCGCTGCTGACCGAGCT
CCGGTCTGAAGCTCTCAAGGACCGCCACTGGAGGCCTCTGCTTCGACGTC
TCGGCATCAGGGTGGGCTTCCAGGAGCTCAACCTCGGTCTCCTGTGGGGC
TCCGCGCTGATGGGACACAAGAAAGGCATCGGGGAGACGGTGCTGGCCGC
GCAGGGCGAGATGGCTCTCGAGGAGTTCCTACGACAGGTGAGGCGGCTTT
TCGGTTCGCTTTGGTTCTCGCTGTTGTGACCAAGTTGTCGGCTTTGCGTA
AGGTGTGTGGTGTGAAACCTTTTGTGTGTTTGTGCATCTCCTGCTCTCAG
CAGCCGAAGGTTGTTCAGAAGCAGATGGTGAAGGTCACAACCGGCTTCGT
TTCCCTCGAGCGCTCGGAAGTGAGTCTTCAGGCGTTTCTCTGCCGATGAC
AAGGACGTTTTTGTAATTGCTTCCGAACTTCAGCCTCAGCTCAGACAAAA
AAATTTAAATTTATTCCCGTAGATGCAGAATGGTGATAATTAGTACAGCA
GTGTCGCAAGTGCATGCACAGATGTAAACTCTGAGGGTGGGCACTGTAAA
TGATATTTTCGGAATTATGGTTCAGGCTGCAGACGCAAACATCATCAGGC
ACATCCCACAAGCAAGACAGAGTGTAGCGCTTGCAAGGCACGGCCTCTTT
TCTTTTTGCTTCTTTTCGCCCCACTCTGTACATCCTTTCCGATTGCCTCT
CAGGTACGGGAAGACTGGCAAGGGCGGGAGCTTGAGCTGGTGTCCTATCA
GGGACGCATCCAGCTGGTGAAGGGCTGGGACGCCGTCTTCTCCCGTCTGG
AGGAGCACCTCAACGGACTGCAGTCGATGCGGGCATCGCCGCACTTCCAC
GCTGTTCAGGTACGAACGAGCCACGGCTGCATCGCTACTTGTTTTGTGTA
GTGCAGACGCATGTTCCCCTCGACAAGTTGGTGGAGGACCGCAGCAGGTC
GCAGCGCTGCCATGTAGTGCTACGATTTTGTCGAGTGCGAAGAAGGCCAT
GCCATATACAGCGAATGCTAGAGACGAACAGTTCTTGTTAAATGGATTCC
CGATTTTTCATTTCCCGCGTGTTATTCCTCTTCCTCCACGTGCACAAATG
ACCGAGTCTTGGCCCACTTTCAAAAGGGTTCAGGAGCACCCTTCGGCCGC
ATGCTGTGCTGGATTTTCCGACGTATCGGTTTCCTCGTGTTCATCCTTTT
GGCGACACCGCTGTCGCGTCGCGCCGTGCACGTGCGTGCACCGCCGGCAA
AACAAGCGCCGTCCCATGTCTGCCCAGACGCTGTTCCTCGCTACCGTTTC
GTATTTCATGGTGGACCACAATTCGTGCTACATATTTTCCCCGTTGTTAC
TTATCTATAGCTTCCGCGTTTTTGATGACAAGATCTCCCTATTTCCCTCT
TCTTACTTTATGCGTGCAGGAGTTCCAAGAAGAGGCGGCTTTGTGGGAAG
AGCGCTTGACCAAGCTGAACGCTGTGCTGGACGCGTGGGTGGACGTGCAG
AGGAAGTGGCTCTATCTTGAAGGCATTTTCTTTGCCTCAAGGGACATCAA
GCAACAGCTTCCGTCAGAGTTCGCGGTGCGTTGCGTGTGCCCTGCCGGGT
TGGCAAAGCTGGGATTTTCGTGGTTTGTATGAATAGTTGTGTTTGAATGT
GCTGTATGTAACCTCTGTACAGCGAGGGCAACGTATCGGTATGCGACAAG
TTTGTGTGCGTTTGTTTGTAGCTGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTGTCTTCTC
GTGTGTGGTTACCGATTTGTGTTTTCTCCTTCCGCGACGACGGCCGCAGA
GGTTTAAGTCCGTGGACGCTGAGTTCGTGCAGCTCATGAGAAGGGTGGCG
CACAAGCCCAACATCATGGAGGTAAGAACGATACGCACGAGTGGCCGCTG
AGGCGACGAAAAGTCTTTGAGCACGACGTCAGGACACGTGTTAACGAATT
CGGCACGAAACTGGTTGGAAGCGTCTGCCCGTGGAGCACGTGGATTTTCA
TACAACCCGCAACTCGCGCCAGGCGCCAAACTTTCATGAACCGGGGAAAT
AGTAGTGACAATTGGCGAGGCCTGAGACACGAGCCGGCGACACCGCGGTC
GCCCACGTCAACCGTCTACCCATCAGGCTGTAGGACGCATTTTAGGTGGA
GTGTAGACGCCTCGCCCAGGATATCCGCCGTGGTGTAGCAAGGCAAGGCA
CAGATGCACCCGTGGGGGTGTCTTGGAGCAGATCCGTGAGCGGCTCGCGA
TGGAGGAGATGATGCAGATGTGGGGTTCGAAAACGGAGTCGATGGCGATG
TACTACACGATGAGCCCTCCTCCAAACGTGGTGGTAGTAGGGCCATCAAA
TAGGCGTTGATATCTCCGGCATTTGCAACTGACTTCGCGGCGTGTGCATG
CCGTGGGCTGCTTGAAATCCCATCTTGCTCAACAACACGAACTTTGGGTG
ACTTTGCCAGGCTCCAGGCCAGTGGTCGAGGAGAGGTTACGACAACGAGA
GTTGGGTGTGACCACATGCCGGAGCTGGCGACCTCATCCAAAATCCAATG
CTTGTATTTTGTCATCGTAGGCCAAGAGCAATGGTACATCAGGAACATCA
TGTAGCGCGACAGCCATACGAACGAAACCAGCAAGTCGCGTTGTTAGGTT
GCGGCGTACCCACGACGTGTACAAATCCAAGACAACATGAGAGTTTCATG
GGGTGGGCACGAAGCGCCGTTGTCGCTAAGGATTACTGTAGCGGGAACTT
GTCTTCGACTCCAGCCATGGCTGGTGTGCTGTCTCATTAAACACCGCTAC
CTGCCTGTCTGGAGCTGCACTCTGTCGTGGGCAGTAGCGTTCTAGTCCCT
CTGTTCAGCTGACCTATCGACGCTCCGTGATGACTTGAGGCCAGGTGTTA
TCGATGGAGAATCTCCTACGGCAACTCGAGAGGCAAGAGGGTCTCATGTC
TCACATCCAGAAGGCTCTCGGAGAGTACCTGGAGGGACAGAGACAGGTGA
CGATGTTTGGATGCAGGCAGCTTGTTGTCACAATCGCCGACAAGGTTGAC
TCAAGACCTTGTTGACATGATGGAGTGAGCACAGGGCGTGCTTTCCCGTG
CACGCAGAAGGGGGATTGCCCTTCTATAAACACATACATATGGTACCACC
AATGATACACGGAACCTAGATCTCCATAGATCCGTATCGAGTGCCGAGTA
GCCCCAAACAGACGATGGCAATGCTCGGTATTGACGGGACTGTACATACC
TTTTGTATTCAGTAGGGTAAACACTCATTTTGGAATATTCTTGAGAAGAC
GCTCAATCCGTACTCATTTCATTTTAGTGGGCAAACAAATATCCTCGAAG
TTTGGGCTGAGTGTGATTTCTCGAAATACCCTGAGTACGCTCTGTTGTGT
ACACCCTGAACGTCTTCGCCCTCCGTATGCAGACGATCGCTTGGAGGAAT
TCAAACCCTCAAGTTTCGAGACATGTTGGTTGTTTCAGGTTACGTTCATT
GATTCACCTCCGAACAACTGTGTATTCTCGGAACCGACCCAGGTAGCTGC
GGGCAACCTATTTGATGTCACAATCCCGACGGCGCCGTGTCTTGTCTGCA
CAATCCTAATCCTGTCCGATGCAGGCCTTCAGCCGTTTCTACTTCGTCGG
TGACGAGGACCTGCTGGAGATCGTCGGTAACGCCAACGAGCCTGCAAAAG
TCGCCCAGCACCTGGGCAAGATGTTCGCTTCCGTGGGAGCACTAAACATG
CCAACAGGTCCGTCCATCCCTCCCTCTGTCTCTCTGTTCTGTCTTGGGGT
CCCCCTTTCGTAGACATTCAAGTCCAGGGCGTGTTCGCAGCAGCAATGGT
TTGAGTATCCATTGGCTTCCGCAAACTAATGCCGCATGTGGTGCAAGGGG
TCGGTCTTCGCGCTCTTATGTAGTGAGATGAGAACTTGTCCTCTCTCTTC
GACTTGACTTGAAAGCCTACTCTTGAAGGTCCGCCCACCCCCGTCGCATG
TCTGCCACAGGCGGCGACGACGGAAAGGCGGGAAGCGCGCTGTCAATGAT
TTCAAAGGACGGCGAGGAGGTCGCGTTCAAGACGCCCGTAAACGTGGCAG
ATAACGGGGTAAAGGAGTGGCTCAAAGCCCTAGAGACCGAGATGAGGAGC
ACCCTGGCCTTGCTCCTGAGGCAGGCGGTGGCGGCCACGGGAGACCTGTC
CACGTCCAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7158:895..6754+

>mRNA_Ecto-sp13_S_contig7158.18264.1 ID=mRNA_Ecto-sp13_S_contig7158.18264.1|Name=mRNA_Ecto-sp13_S_contig7158.18264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7158:895..6754+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGAAGGGTGGCGCACAAGCCCAACATCATGGAGGTGTTATCGATGGA
GAATCTCCTACGGCAACTCGAGAGGCAAGAGGGTCTCATGTCTCACATCC
AGAAGGCTCTCGGAGAGTACCTGGAGGGACAGAGACAGGCCTTCAGCCGT
TTCTACTTCGTCGGTGACGAGGACCTGCTGGAGATCGTCGGTAACGCCAA
CGAGCCTGCAAAAGTCGCCCAGCACCTGGGCAAGATGTTCGCTTCCGTGG
GAGCACTAAACATGCCAACAGGCGGCGACGACGGAAAGGCGGGAAGCGCG
CTGTCAATGATTTCAAAGGACGGCGAGGAGGTCGCGTTCAAGACGCCCGT
AAACGTGGCAGATAACGGGGTAAAGGAGTGGCTCAAAGCCCTAGAGACCG
AGATGAGGAGCACCCTGGCCTTGCTCCTGAGGCAGGCGGTGGCGGCCACG
GGAGACCTGTCCACGTCCAGG
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