prot_Ecto-sp13_S_contig7155.18262.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7155.18262.1
Unique Nameprot_Ecto-sp13_S_contig7155.18262.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length448
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7155.18262.1 vs. uniprot
Match: D7FHX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX2_ECTSI)

HSP 1 Score: 515 bits (1327), Expect = 5.400e-180
Identity = 305/425 (71.76%), Postives = 311/425 (73.18%), Query Frame = 0 
Query:   24 MSSPKRQLPLHLDKWIITVREAKDLTRGEANDFFRKMSPVCELTLGSQGPFSTGVKLNTTQPCWDDSVEFDAAAAAASFLLSPSRPSKTKPHSSXXXXXXXXXXXXXX-RLPTLGPKLEVFCYSRGSPAKGAASAPAXXXXXXXXXXKGGRKEMEKVEIGRAHVMLVADDVGGAGSHTRVRIPLLRINALGYQVPAGSVILEYMLVPGIPQPMAPVSTETEGSLSGLAARTTASFREDGGNGGSRGGVGSCCMDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLCPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTA-AAAAGDAGATLWQSGPLPSLTQQQQRFPGNXXXXXXXXXXXXXXXXCKKCQVRVTKEGTLALTRGREELAVFSPAWAEAFFDIPPRGDK 446
            MSSPKRQLP+HLDKW+ITVRE KDLTRGEANDFFRKMSPVCELTLGSQGPFSTGVKLNTTQPCWDDS+EFDAA A                   XXXXXXXXXXXXX  RLPT+GPKLE                                                                       G QVPAGSVILEYMLVPGIPQP+APVSTETEGSLSGLAARTTA FREDGGN GSRGGVGSCCMDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDL PIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTA AAAAGDAGATLWQSGPLPSLTQQQQR PG            XXXX CKKCQV+VTKEGTLALTRGREELAVFSPAW EAFFDIPPRGDK
Sbjct:    1 MSSPKRQLPMHLDKWVITVREGKDLTRGEANDFFRKMSPVCELTLGSQGPFSTGVKLNTTQPCWDDSIEFDAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLRLPTVGPKLE-----------------------------------------------------------------------GSQVPAGSVILEYMLVPGIPQPVAPVSTETEGSLSGLAARTTAPFREDGGNDGSRGGVGSCCMDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTAGAAAAGDAGATLWQSGPLPSLTQQQQRSPGKPGDNGKDKSGGXXXXSCKKCQVKVTKEGTLALTRGREELAVFSPAWTEAFFDIPPRGDK 354
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7155.18262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX2_ECTSI5.400e-18071.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 37..105
e-value: 1.0E-6
score: 30.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 304..447
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..303
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 39..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7155contigEcto-sp13_S_contig7155:907..7358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7155.18262.1mRNA_Ecto-sp13_S_contig7155.18262.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7155 907..7358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7155.18262.1 ID=prot_Ecto-sp13_S_contig7155.18262.1|Name=mRNA_Ecto-sp13_S_contig7155.18262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=448bp
TDLFLCHSCRTRTTGTCPHRDGSMSSPKRQLPLHLDKWIITVREAKDLTR
GEANDFFRKMSPVCELTLGSQGPFSTGVKLNTTQPCWDDSVEFDAAAAAA
SFLLSPSRPSKTKPHSSAVGGGNSENDDDDDRLPTLGPKLEVFCYSRGSP
AKGAASAPAGGGGVPPGGGKGGRKEMEKVEIGRAHVMLVADDVGGAGSHT
RVRIPLLRINALGYQVPAGSVILEYMLVPGIPQPMAPVSTETEGSLSGLA
ARTTASFREDGGNGGSRGGVGSCCMDELKKPARKPALLACVGAVIAAVLA
VRLSGVCSARMPTDLCPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARG
PKPLLTAAAAAGDAGATLWQSGPLPSLTQQQQRFPGNPGDNGKNKSGGGS
GGSCKKCQVRVTKEGTLALTRGREELAVFSPAWAEAFFDIPPRGDKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf