mRNA_Ecto-sp13_S_contig71500.18256.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: D7FWY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWY8_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 6.600e-23 Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG
Sbjct: 97 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 142
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A2H3JGJ0_WOLCO (DUF1348-domain-containing protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JGJ0_WOLCO) HSP 1 Score: 78.2 bits (191), Expect = 5.350e-17 Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAGTHTYTR 156
PPFTAETAL+K K A+ WNTRDPA+VA AY+PDT+WRNRD+ GT TR
Sbjct: 6 PPFTAETALQKVKVAQRLWNTRDPARVAQAYTPDTIWRNRDQFMTGTAEVTR 57
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A1V9YFT7_9STRA (Hisitidine kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFT7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.280e-16 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTA TAL+K KAAE AWN+RD AKVA AY+PDTVWRNRDEIF G
Sbjct: 49 PPFTAATALQKVKAAENAWNSRDAAKVALAYTPDTVWRNRDEIFVG 94
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: UPI0016525E2B (nuclear transport factor 2 family protein n=1 Tax=Saccharophagus sp. K07 TaxID=2283636 RepID=UPI0016525E2B) HSP 1 Score: 76.3 bits (186), Expect = 2.460e-16 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTAETAL+K KAAEAAWN++DP +VA AY+PD+ WRNRDE F+G
Sbjct: 14 PPFTAETALQKVKAAEAAWNSKDPERVAMAYTPDSEWRNRDEFFSG 59
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A7S3E6W7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E6W7_9RHOD) HSP 1 Score: 75.9 bits (185), Expect = 6.900e-16 Identity = 36/52 (69.23%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAGTHTYTR 156
PPF ETAL+K KAAE AWNTRDP KV AY+PDTVWRNRD IF G R
Sbjct: 57 PPFNEETALQKVKAAENAWNTRDPEKVCMAYTPDTVWRNRDHIFCGREEVKR 108
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A2R6P1V6_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6P1V6_9APHY) HSP 1 Score: 74.7 bits (182), Expect = 1.210e-15 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTAETAL+K KAA+ WNTRDP KVA AY+PDTVWRNRD+ G
Sbjct: 6 PPFTAETALQKVKAAQRLWNTRDPQKVALAYTPDTVWRNRDQFLRG 51
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: I3IEL3_9GAMM (Uncharacterized protein n=2 Tax=unclassified Cellvibrio TaxID=2624793 RepID=I3IEL3_9GAMM) HSP 1 Score: 74.3 bits (181), Expect = 1.460e-15 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAGTHTYTR 156
PPFTAETALKK +AAE AWN+RDP +VA AY+PD+ WRNRD+ F+G + +
Sbjct: 19 PPFTAETALKKVQAAEDAWNSRDPERVAMAYTPDSEWRNRDQFFSGRESIVK 70
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A846XKZ0_9NOCA (Nuclear transport factor 2 family protein n=2 Tax=Nocardia TaxID=1817 RepID=A0A846XKZ0_9NOCA) HSP 1 Score: 74.3 bits (181), Expect = 1.640e-15 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTAETAL+K AAEAAWNTRDP +VA AY+PD+VWRNRD+ G
Sbjct: 9 PPFTAETALQKVLAAEAAWNTRDPQRVALAYTPDSVWRNRDQFVTG 54
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A7S0T4L7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4L7_9RHOD) HSP 1 Score: 75.5 bits (184), Expect = 2.100e-15 Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTA+TAL K KAAEAAWN+RDP KVA AYS D+VWRNRD+IF G
Sbjct: 85 PPFTADTALLKVKAAEAAWNSRDPEKVALAYSLDSVWRNRDQIFRG 130
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Match: A0A024UEU2_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEU2_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.100e-15 Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 1 PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAG 138
PPFTAETAL+K KAAE AWN+RD +V+ AY+PDTVWRNRD+IF G
Sbjct: 50 PPFTAETALQKVKAAEDAWNSRDAERVSLAYTPDTVWRNRDQIFVG 95 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig71500.18256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig71500.18256.1 >prot_Ecto-sp13_S_contig71500.18256.1 ID=prot_Ecto-sp13_S_contig71500.18256.1|Name=mRNA_Ecto-sp13_S_contig71500.18256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp PPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAGTHTYback to top mRNA from alignment at Ecto-sp13_S_contig71500:66..221+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig71500.18256.1 ID=mRNA_Ecto-sp13_S_contig71500.18256.1|Name=mRNA_Ecto-sp13_S_contig71500.18256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=156bp|location=Sequence derived from alignment at Ecto-sp13_S_contig71500:66..221+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig71500:66..221+ >mRNA_Ecto-sp13_S_contig71500.18256.1 ID=mRNA_Ecto-sp13_S_contig71500.18256.1|Name=mRNA_Ecto-sp13_S_contig71500.18256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=156bp|location=Sequence derived from alignment at Ecto-sp13_S_contig71500:66..221+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |