prot_Ecto-sp13_S_contig12161.1825.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12161.1825.1
Unique Nameprot_Ecto-sp13_S_contig12161.1825.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length156
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12161.1825.1 vs. uniprot
Match: D8LBJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ7_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.790e-77
Identity = 146/156 (93.59%), Postives = 152/156 (97.44%), Query Frame = 0 
Query:    1 SPIGRWRGYCLAMASCAYVCAVLRESEDDMLFADMAETAAAAWAAASEVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRHNGHDSGSGGAGTAAAVMMVGEG 156
            SPIGRWRGYCLA+ASCAYVCAVLRESEDDMLFADMAETAAAAWAAA EVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNR+NG DSGSGGAGTAA++++  EG
Sbjct:  565 SPIGRWRGYCLALASCAYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRNNGTDSGSGGAGTAASMIVEEEG 720
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BLAST of mRNA_Ecto-sp13_S_contig12161.1825.1 vs. uniprot
Match: A0A6H5JXK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK1_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 5.240e-72
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0 
Query:    1 SPIGRWRGYCLAMASCAYVCAVLRESEDDMLFADMAETAAAAWAAASEVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRHNG 136
            SPIGRWRGYCL +ASCAYVCAVLRESEDDMLFADMAE  AAAWAAA EVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNR+NG
Sbjct:   13 SPIGRWRGYCLVLASCAYVCAVLRESEDDMLFADMAEATAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGASGNRNNG 148
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12161.1825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBJ7_ECTSI1.790e-7793.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXK1_9PHAE5.240e-7295.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12161contigEcto-sp13_S_contig12161:3954..5043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12161.1825.1mRNA_Ecto-sp13_S_contig12161.1825.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12161 3953..5043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12161.1825.1 ID=prot_Ecto-sp13_S_contig12161.1825.1|Name=mRNA_Ecto-sp13_S_contig12161.1825.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp
SPIGRWRGYCLAMASCAYVCAVLRESEDDMLFADMAETAAAAWAAASEVS
GEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGV
QGSIIGPTHAISAALTSLKGAARRVRKGASGNRHNGHDSGSGGAGTAAAV
MMVGEG
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