prot_Ecto-sp13_S_contig7148.18253.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7148.18253.1
Unique Nameprot_Ecto-sp13_S_contig7148.18253.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7148.18253.1 vs. uniprot
Match: D7FPT3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT3_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.040e-90
Identity = 149/175 (85.14%), Postives = 155/175 (88.57%), Query Frame = 0 
Query:   33 RSGIFCGDRGGKIPGGDECLVQALTLKLKAGPAAPGSLAEGXXXXXXXXXXXXXXXXXPHHGSVKWAPLSTARRVGSGGGPKRPLKLTSMNFSASSTNEDERGGTASRGGSRIVSGLGEGVAGNISRTNIVAGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR 207
            RSG FCGDRGGK+PGG+ECLVQALTLKLKAGPA+PGSLAE                  PHHGSVKWAPLSTARR+GSGGGPKRPLKLTSMNFSASST+EDERGGTASRGGSRIVSGLGEGVAGNISRT+IV GDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR
Sbjct:  290 RSGFFCGDRGGKVPGGEECLVQALTLKLKAGPASPGSLAE-VAGGVAVGGQHRGGGGQPHHGSVKWAPLSTARRIGSGGGPKRPLKLTSMNFSASSTSEDERGGTASRGGSRIVSGLGEGVAGNISRTSIVGGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR 463
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BLAST of mRNA_Ecto-sp13_S_contig7148.18253.1 vs. uniprot
Match: A0A6H5KZN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN9_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.490e-40
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0 
Query:  122 MNFSASSTNEDERGGTASRGGSRIVSGLGEGVAGNISRTNIVAGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR 207
            MNFS+S+T+EDERGGTASRGGSRI +GLGEGVAGNISRT+IV GDKPGAVSLAT+DVGARV PALPY K+VSLPSG SGIGLIRGR
Sbjct:    1 MNFSSSTTSEDERGGTASRGGSRIAAGLGEGVAGNISRTSIVGGDKPGAVSLATIDVGARVPPALPYDKIVSLPSGDSGIGLIRGR 86
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7148.18253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPT3_ECTSI1.040e-9085.14Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZN9_9PHAE2.490e-4086.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7148contigEcto-sp13_S_contig7148:4979..7511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7148.18253.1mRNA_Ecto-sp13_S_contig7148.18253.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7148 4891..7706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7148.18253.1 ID=prot_Ecto-sp13_S_contig7148.18253.1|Name=mRNA_Ecto-sp13_S_contig7148.18253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MAGYPTGPIAHSFSPFRPYDGLPPPNAVSGSLRSGIFCGDRGGKIPGGDE
CLVQALTLKLKAGPAAPGSLAEGPGGVAVGGGQHRGGGGQPHHGSVKWAP
LSTARRVGSGGGPKRPLKLTSMNFSASSTNEDERGGTASRGGSRIVSGLG
EGVAGNISRTNIVAGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSG
IGLIRGR*
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