prot_Ecto-sp13_S_contig7145.18251.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7145.18251.1
Unique Nameprot_Ecto-sp13_S_contig7145.18251.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length282
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7145.18251.1 vs. uniprot
Match: D7FVG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG6_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 5.720e-114
Identity = 261/282 (92.55%), Postives = 264/282 (93.62%), Query Frame = 0 
Query:    1 MRQGGHSKRPREGNSALYTAVCRGDANLVAELLKPKRHGQRDGSAAAAAGAPAALDLEELSRGSTALHAACGTGQSRIVALLIEAGGNPNTVRPKDGYSPLLIAVEVRERGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDILELLVEGATAAACDDGFLARKLLLQLSDARGHQPLHCAVRDGARARDTVLTLLGMGAEVDGGALPAXXXXXXXXXPLMLAALKVLPAIAKVLIEAGANVNVR 282
            MRQGGHSKRPREGNSALYTAVCRGDA+LVAELLKPK HGQRDGSAAAAAGAPAALDLEELSRGSTALHA CGTGQSRIVA+LIEAG +PNTVRPKDGYSPLLIAVEVRER IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ILELLVEGA AAACDDG LARKLLLQLSDARGHQPLHCAVRDGARARDTVL LLGMGAEVDGGALPA         PLMLAALKVLPAIAKVLIEAGANVN R
Sbjct:    1 MRQGGHSKRPREGNSALYTAVCRGDADLVAELLKPKPHGQRDGSAAAAAGAPAALDLEELSRGSTALHAGCGTGQSRIVAMLIEAGADPNTVRPKDGYSPLLIAVEVRERDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILELLVEGAAAAACDDGLLARKLLLQLSDARGHQPLHCAVRDGARARDTVLALLGMGAEVDGGALPALPPPPT---PLMLAALKVLPAIAKVLIEAGANVNAR 279
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BLAST of mRNA_Ecto-sp13_S_contig7145.18251.1 vs. uniprot
Match: A0A6H5L3F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F6_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.400e-55
Identity = 96/105 (91.43%), Postives = 98/105 (93.33%), Query Frame = 0 
Query:    1 MRQGGHSKRPREGNSALYTAVCRGDANLVAELLKPKRHGQRDGSAAAAAGAPAALDLEELSRGSTALHAACGTGQSRIVALLIEAGGNPNTVRPKDGYSPLLIAV 105
            MRQGGHSK PREGNSALYTAVCRGDANL AELLK KRHGQ DGSAAAAAGAPAALDLEELSRGSTALHAACGT QSRIVA+LIEAG +PNTV PKDGYSPLLIAV
Sbjct:    1 MRQGGHSKPPREGNSALYTAVCRGDANLAAELLKSKRHGQPDGSAAAAAGAPAALDLEELSRGSTALHAACGTWQSRIVAMLIEAGADPNTVSPKDGYSPLLIAV 105
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7145.18251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVG6_ECTSI5.720e-11492.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3F6_9PHAE2.400e-5591.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 268..282
score: 38.51
coord: 131..146
score: 39.89
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 12..42
e-value: 190.0
score: 10.3
coord: 210..241
e-value: 80.0
score: 12.1
coord: 252..281
e-value: 18.0
score: 14.2
coord: 164..193
e-value: 650.0
score: 6.4
coord: 130..159
e-value: 0.42
score: 19.7
coord: 62..91
e-value: 0.0021
score: 27.3
coord: 96..125
e-value: 0.19
score: 20.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 255..281
e-value: 0.0094
score: 16.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 255..282
score: 9.458
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 130..156
score: 10.953
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 62..94
score: 11.247
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 210..240
score: 8.816
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 96..128
score: 8.87
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 128..282
e-value: 1.5E-20
score: 75.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..127
e-value: 2.1E-19
score: 71.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 17..282
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 12..91
e-value: 1.7E-7
score: 31.7
coord: 102..188
e-value: 7.9E-9
score: 36.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 62..282
score: 38.701
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 131..281
coord: 7..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7145contigEcto-sp13_S_contig7145:6209..7054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7145.18251.1mRNA_Ecto-sp13_S_contig7145.18251.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7145 6209..7054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7145.18251.1 ID=prot_Ecto-sp13_S_contig7145.18251.1|Name=mRNA_Ecto-sp13_S_contig7145.18251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp
MRQGGHSKRPREGNSALYTAVCRGDANLVAELLKPKRHGQRDGSAAAAAG
APAALDLEELSRGSTALHAACGTGQSRIVALLIEAGGNPNTVRPKDGYSP
LLIAVEVRERGIVNALLEAKADPELFSHAEGIAPLHMAASQGMTEIVLDL
LRAGANQLQPTLGKLLAPIHYASFSGCVDILELLVEGATAAACDDGFLAR
KLLLQLSDARGHQPLHCAVRDGARARDTVLTLLGMGAEVDGGALPALPAL
PPPPTPLMLAALKVLPAIAKVLIEAGANVNVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom