prot_Ecto-sp13_S_contig71384.18244.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig71384.18244.1
Unique Nameprot_Ecto-sp13_S_contig71384.18244.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length58
Homology
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: D7FKI7_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI7_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.360e-28
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCKTHGLGYKQ 58
            LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLA+ILTYHCKTHGLGYKQ
Sbjct:   43 LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLARILTYHCKTHGLGYKQ 100          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A7S2W2Q6_9STRA (TBC1 domain family member 23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2Q6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.480e-10
Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCKTHGLGYKQ 58
            LD +I  T  DLENQRV+RVD ERTR  L +F+ P ++ L++K+LT++CK   + YKQ
Sbjct:  143 LDDSIRDTKQDLENQRVIRVDAERTRADLAEFRTPEMQLLVSKLLTFYCKRKNIKYKQ 200          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A2R5GE11_9STRA (TBC1 domain family member 23 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GE11_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.780e-8
Identity = 27/58 (46.55%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCKTHGLGYKQ 58
            LD +I  T  DLENQRV+RVD +RTR  ++ F+   ++ L++++LT++CK  G+ YKQ
Sbjct:  911 LDDSIRDTKQDLENQRVIRVDAQRTRADVEIFRTEEMQLLVSRLLTFYCKRKGIKYKQ 968          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A1R2AW83_9CILI (Rab-GAP TBC domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AW83_9CILI)

HSP 1 Score: 50.4 bits (119), Expect = 1.060e-5
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    6 LSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCKTHGLGYKQ 58
            L T+L+L NQRV+ +DV RTR   D FK P  K LL ++LTY+CKT  + YKQ
Sbjct:   23 LETELNLPNQRVINIDVLRTRS--DLFK-PNEKILLEQLLTYYCKTEKVTYKQ 72          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A3P3Y0X7_PLABS (TBC1 domain family member 23 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y0X7_PLABS)

HSP 1 Score: 49.7 bits (117), Expect = 1.990e-5
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    2 DAAILSTDLDLENQRVVRVDVERTRPALDQFKRPR-VKNLLAKILTYHCKTHGLGYKQ 58
            D  +   D DL NQRV+R+D++RTRP +D F+    V + L  +LT  CK H + YKQ
Sbjct:  173 DVQLPECDFDLYNQRVIRMDIQRTRPDVDFFRNDSAVGDALEMMLTLFCKRHLINYKQ 230          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A0H5RA84_9EUKA (TBC1 domain family member 23 n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RA84_9EUKA)

HSP 1 Score: 49.3 bits (116), Expect = 2.730e-5
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    1 LDAAILSTDLDLENQRVVRVDVERTRPALDQFK-RPRVKNLLAKILTYHCKTHGLGYKQ 58
            ++ A+     DL NQRV+R+D++RTRP +D F+    V+  L  ILT  CK H + YKQ
Sbjct:  165 INIALKDYTFDLYNQRVIRMDIQRTRPDVDYFRDNDDVREALEIILTVFCKRHLINYKQ 223          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A482R8S9_9EURY (TBC domain-containing protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R8S9_9EURY)

HSP 1 Score: 48.1 bits (113), Expect = 6.750e-5
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCKTHGLG 55
            ++AAI S  LDL NQRVVR+D ERTR    +FK   +   + ++LTY+CK    G
Sbjct:    9 VNAAIASVGLDLPNQRVVRMDAERTRTDQAEFKDAAMLQRVQRLLTYYCKCGYAG 63          
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Match: A0A813B5J5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B5J5_9DINO)

HSP 1 Score: 47.0 bits (110), Expect = 7.980e-5
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    1 LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCKTHGLGYKQ 58
            ++  I +T  DL NQRV+RVD ERTR     FK   ++  + +++TY+ K   + YKQ
Sbjct:   35 MNQRIAATKQDLPNQRVIRVDAERTRAGHPLFKTDEMRARIRRVMTYYVKNRSVVYKQ 92          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig71384.18244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FKI7_ECTSI1.360e-2898.28Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2W2Q6_9STRA6.480e-1051.72TBC1 domain family member 23 n=1 Tax=labyrinthulid... [more]
A0A2R5GE11_9STRA2.780e-846.55TBC1 domain family member 23 n=1 Tax=Hondaea ferme... [more]
A0A1R2AW83_9CILI1.060e-554.72Rab-GAP TBC domain-containing protein n=1 Tax=Sten... [more]
A0A3P3Y0X7_PLABS1.990e-544.83TBC1 domain family member 23 n=2 Tax=Plasmodiophor... [more]
A0A0H5RA84_9EUKA2.730e-544.07TBC1 domain family member 23 n=1 Tax=Spongospora s... [more]
A0A482R8S9_9EURY6.750e-547.27TBC domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A813B5J5_9DINO7.980e-539.66Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 9..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig71384contigEcto-sp13_S_contig71384:1..174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig71384.18244.1mRNA_Ecto-sp13_S_contig71384.18244.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig71384 1..174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig71384.18244.1 ID=prot_Ecto-sp13_S_contig71384.18244.1|Name=mRNA_Ecto-sp13_S_contig71384.18244.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp
LDAAILSTDLDLENQRVVRVDVERTRPALDQFKRPRVKNLLAKILTYHCK
THGLGYKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf