prot_Ecto-sp13_S_contig7138.18243.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7138.18243.1
Unique Nameprot_Ecto-sp13_S_contig7138.18243.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7138.18243.1 vs. uniprot
Match: D7G857_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G857_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 4.360e-131
Identity = 190/223 (85.20%), Postives = 196/223 (87.89%), Query Frame = 0 
Query:    1 MGWLHQFDKNLRFKYRIHEVLDASASGVGDLPPKVVGWEVRVVESDSNWNANLHMHSRSFERFKFDLEFLELEYEDDPTDLHTLFYLGITKFAYIESLLGKGTHKKTPELQAFISDGMSYFRQAVDLHGEIPNSELVWGSKRWLSYGYHYFVGDSEEAEKMYKSCIEYDRARIDCLVFLSRLHLDNNALDAAWDTAKEGLVHRPPAGRVMTYFYTFECFLPTQ 223
            MGWLH+FDKNLRFKYR                      +VRVVESDSNWNA     SRSFERFKFDLEFLELEYEDDPTDLHTLFYLGITKFAYIESLLGKGTH+KTPELQAFI+DGMSYFRQAVDLHGEIPNSELVWGSKRWLSYGYHYFVGDSEEAEKMYKSCIEYDRARIDCLVFLSRL+LDNNALDAAWDTAKEGLVHRPPAG+VMTYFYTFECFLPTQ
Sbjct:  209 MGWLHRFDKNLRFKYR----------------------QVRVVESDSNWNAXXXXXSRSFERFKFDLEFLELEYEDDPTDLHTLFYLGITKFAYIESLLGKGTHEKTPELQAFITDGMSYFRQAVDLHGEIPNSELVWGSKRWLSYGYHYFVGDSEEAEKMYKSCIEYDRARIDCLVFLSRLYLDNNALDAAWDTAKEGLVHRPPAGQVMTYFYTFECFLPTQ 409
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BLAST of mRNA_Ecto-sp13_S_contig7138.18243.1 vs. uniprot
Match: A0A6H5JUC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC4_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.210e-65
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0 
Query:  222 TQAANVISKRIIASESDDLGNDSLEGLLTMGWYLVRHHRTHCTDGVMVDTPEDIDRLESWFEEAIAREALDVAEIKRLTLLSDEESLLALLLRTWGTGTKSSTVWHPQVQQQPQVTQVQGQH 343
            ++AANVISKRIIASESDDLGNDSLEGLLTMGWYLVRHHRTHCTDGVMVDTPEDIDRLESWFEEAIAREALDVAEIKRLTLLS EESLLALLLRTWGTGT+SSTVWHPQVQQ+PQ TQVQ Q+
Sbjct:    5 SKAANVISKRIIASESDDLGNDSLEGLLTMGWYLVRHHRTHCTDGVMVDTPEDIDRLESWFEEAIAREALDVAEIKRLTLLSGEESLLALLLRTWGTGTRSSTVWHPQVQQRPQGTQVQRQN 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7138.18243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G857_ECTSI4.360e-13185.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUC4_9PHAE4.210e-6593.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 340..360
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 51..363
e-value: 1.5E-5
score: 26.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7138contigEcto-sp13_S_contig7138:2291..6567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7138.18243.1mRNA_Ecto-sp13_S_contig7138.18243.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7138 2291..6589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7138.18243.1 ID=prot_Ecto-sp13_S_contig7138.18243.1|Name=mRNA_Ecto-sp13_S_contig7138.18243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MGWLHQFDKNLRFKYRIHEVLDASASGVGDLPPKVVGWEVRVVESDSNWN
ANLHMHSRSFERFKFDLEFLELEYEDDPTDLHTLFYLGITKFAYIESLLG
KGTHKKTPELQAFISDGMSYFRQAVDLHGEIPNSELVWGSKRWLSYGYHY
FVGDSEEAEKMYKSCIEYDRARIDCLVFLSRLHLDNNALDAAWDTAKEGL
VHRPPAGRVMTYFYTFECFLPTQAANVISKRIIASESDDLGNDSLEGLLT
MGWYLVRHHRTHCTDGVMVDTPEDIDRLESWFEEAIAREALDVAEIKRLT
LLSDEESLLALLLRTWGTGTKSSTVWHPQVQQQPQVTQVQGQHEQNQEQH
EEQGEQYQQQQHQHHTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf