mRNA_Ecto-sp13_S_contig7133.18237.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A6H5JYU1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYU1_9PHAE) HSP 1 Score: 320 bits (819), Expect = 9.440e-106 Identity = 163/177 (92.09%), Postives = 166/177 (93.79%), Query Frame = 1
Query: 1 MALVARRFSSNAGARWRTVGFGKGLPRSVGADRSAPSRLTAETYTVRPTALVPPHTCRRGISSTAARKDKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDMS 531
MALVARR SSNAG RWR +G GKGLPRSVGADRSA SRL AET+TVR TALV P CRRGISST ARKDKVNMTF+EDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDMS
Sbjct: 1 MALVARRVSSNAGPRWRLLGLGKGLPRSVGADRSAASRLAAETFTVRTTALVSPQKCRRGISSTGARKDKVNMTFLEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDMS 177
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A835YS64_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS64_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.890e-45 Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 1
Query: 211 VNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPED 516
VN+TFVE DG ++ V+A LG +LLEVAHENDVELEGACGGDLACSTCH+V PK+ YD L K+EEE+DMLDLAWGLTDTSRLGCQIKVT LEG L+K+PED
Sbjct: 5 VNVTFVEADGRKVSVKAPLGKSLLEVAHENDVELEGACGGDLACSTCHLVFPKDVYDTLPPKQEEEEDMLDLAWGLTDTSRLGCQIKVTPALEGALLKIPED 106
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A5D6XTI2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTI2_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.800e-41 Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1
Query: 163 HTCRRGISSTAARKDKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDM 528
H RR SS + V+ TF++ DG + V AE G TLL+VA ENDVELEGACGG+LACSTCH+V KE +DKL E EEE+DMLDLAWGLTDTSRLGCQIKVT+DLEG I+VP++S ++
Sbjct: 40 HLPRRNFSS-----ESVSFTFIDADGGSVAVTAEPGKTLLDVAQENDVELEGACGGELACSTCHLVFEKELFDKLPEISEEEEDMLDLAWGLTDTSRLGCQIKVTKDLEGTTIRVPDESNNL 156
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: K3W9Y4_GLOUD (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Y4_GLOUD) HSP 1 Score: 150 bits (380), Expect = 2.440e-40 Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 172 RRGISSTAARKDKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDM 528
R + A +KV TF++ +G V A LG +LL+VAHEND+ELEGACGG+LACSTCH+V KE ++KL E EEE+DMLDLAWGLTDTSRLGCQIKVT+DLEG ++VP++S ++
Sbjct: 35 RHAAALRAFSTEKVTFTFIDAEGESTTVAATLGQSLLDVAHENDIELEGACGGELACSTCHLVFEKELFEKLPEISEEEEDMLDLAWGLTDTSRLGCQIKVTKDLEGTTVRVPDESNNL 153
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A2D4BR67_PYTIN (2Fe-2S ferredoxin, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR67_PYTIN) HSP 1 Score: 150 bits (380), Expect = 3.740e-40 Identity = 87/169 (51.48%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 34 AGARWRTVGFGKGLP----RSVGADRSAPSRLTAETYTVRPTALVPPHTCRRGISSTAARKDKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDM 528
AGAR +TV + + R A R RLT PTA+ P RR + A +KV+ TF++ DG +V A G TLL+VAHEND+ELEGACGG+LACSTCH+V K+ +D+L E EEE+DMLDLAWGLTDTSRLGCQI V+++LEG I+VP++S ++
Sbjct: 4 AGAR-KTVNMFRAVTSRALRVAEAQRHGVRRLTQRPK-FEPTAMAFP---RREAAGRALSTEKVSFTFIDGDGNASQVIANAGQTLLDVAHENDIELEGACGGELACSTCHLVFEKDVFDQLPEITEEEEDMLDLAWGLTDTSRLGCQIHVSKELEGTTIRVPDESNNL 167
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A485LEX7_9STRA (Aste57867_20427 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEX7_9STRA) HSP 1 Score: 149 bits (377), Expect = 5.930e-40 Identity = 80/147 (54.42%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 88 GADRSAPSRLTAETYTVRPTALVPPHTCRRGISSTAARKDKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDM 528
G +APS LTA +R TA P S + + DK+ +TF+E DGT+ +V A +G T LEVAH NDVELEGACGG+LACSTCH V + L E EEE+DMLDLAWGLTDTSRLGCQIK T+D++GM +K+P+ + +M
Sbjct: 12 GLRMTAPSSLTA----MRKTAFSP-----AAFSGSRSFSDKIRVTFIETDGTKKEVSAVVGETFLEVAHNNDVELEGACGGELACSTCHCVFEPAIFATLPEISEEEEDMLDLAWGLTDTSRLGCQIKATKDMDGMTLKIPDATNNM 149
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A662WR19_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WR19_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.370e-38 Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 169 CRRGISSTAARKDKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDS 519
CR + DKV TFV+ +G V A G TLL+VAHENDVELEGACGG+LACSTCH+V K +D L E EEE+DMLDLAWGLTDTSRLGCQI VT+D++GM +++P+++
Sbjct: 41 CRWPSRRAFSTADKVTFTFVDGEGESTIVTANEGQTLLDVAHENDVELEGACGGELACSTCHLVFEKRVFDTLPEISEEEEDMLDLAWGLTDTSRLGCQIPVTKDMDGMTVRIPDEA 157
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A6A3MC83_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MC83_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.610e-38 Identity = 67/104 (64.42%), Postives = 85/104 (81.73%), Query Frame = 1
Query: 208 KVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDS 519
+V TFV+ +G +V AE G TLL+VAHENDVELEGACGG+LACSTCH+V K +D L E EEE+DMLDLAWGLTDTSRLGCQI VT+++EGM +++P+++
Sbjct: 43 QVTFTFVDGEGESTRVAAEEGQTLLDVAHENDVELEGACGGELACSTCHLVFEKRIFDGLPEISEEEEDMLDLAWGLTDTSRLGCQITVTKEMEGMTVRIPDEA 146
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A1W0A3N9_9STRA (2Fe-2S ferredoxin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3N9_9STRA) HSP 1 Score: 144 bits (362), Expect = 7.240e-38 Identity = 65/108 (60.19%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 205 DKVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDSMDM 528
DK+ TF+E DG E +V +G T+L++AH ND+ELEGACGG+LACSTCH V + L E EEE+DMLDLAWGLTDTSRLGCQIKVT++++GM++K+P++S +M
Sbjct: 34 DKIKFTFIEADGKEKQVTTPVGETILDIAHSNDIELEGACGGELACSTCHCVFEPSIFANLPEICEEEEDMLDLAWGLTDTSRLGCQIKVTKEMDGMIVKIPDESNNM 141
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Match: A0A484E3S8_BRELC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3S8_BRELC) HSP 1 Score: 144 bits (362), Expect = 8.190e-38 Identity = 65/104 (62.50%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 208 KVNMTFVEDDGTEIKVEAELGATLLEVAHENDVELEGACGGDLACSTCHVVLPKEYYDKLDEKEEEEDDMLDLAWGLTDTSRLGCQIKVTRDLEGMLIKVPEDS 519
+V+ TF++ +G V+AE G TLL+VA END++LEGACGG+LACSTCH+V K ++DKL EEE+DMLDLAWGLTDTSRLGCQI+VT+D+EGM +++P+D+
Sbjct: 39 QVSFTFIDGEGERKTVKAEEGQTLLDVAQENDLDLEGACGGELACSTCHLVFEKRFFDKLPTISEEEEDMLDLAWGLTDTSRLGCQIRVTKDMEGMTVRIPDDA 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7133.18237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7133.18237.1 >prot_Ecto-sp13_S_contig7133.18237.1 ID=prot_Ecto-sp13_S_contig7133.18237.1|Name=mRNA_Ecto-sp13_S_contig7133.18237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp MALVARRFSSNAGARWRTVGFGKGLPRSVGADRSAPSRLTAETYTVRPTAback to top mRNA from alignment at Ecto-sp13_S_contig7133:758..3606- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7133.18237.1 ID=mRNA_Ecto-sp13_S_contig7133.18237.1|Name=mRNA_Ecto-sp13_S_contig7133.18237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7133:758..3606- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7133:758..3606- >mRNA_Ecto-sp13_S_contig7133.18237.1 ID=mRNA_Ecto-sp13_S_contig7133.18237.1|Name=mRNA_Ecto-sp13_S_contig7133.18237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=534bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7133:758..3606- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |