prot_Ecto-sp13_S_contig7122.18222.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7122.18222.1
Unique Nameprot_Ecto-sp13_S_contig7122.18222.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length259
Homology
BLAST of mRNA_Ecto-sp13_S_contig7122.18222.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 471 bits (1213), Expect = 8.220e-161
Identity = 245/259 (94.59%), Postives = 249/259 (96.14%), Query Frame = 0
Query:    1 MFDHLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEHGDRELEKAARDMANETVSASDAVEGGVGGELAKLEPLVHLGNIFYRGEKFFWRTKDLIEVVIQLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMGGSGSGSGSRGGEIDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDGDGNLLQPDVTRPEEEVNPGLPAGGEGSSTGSGAKKTKRGSAAARPGLMRTTFDEWDTLL 259
            MFD LDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGE GDRELEKAARDMANETVSA+DA EGG+GGELAKLEPLVHLG IFYRGEKFFWRTKDLIEVV+QLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMGGSGS    RGGE DANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDG+GNLLQPDVTRPEEEVNPGLPAGGEGSSTGSGA KTKRGSAAARPGLMRTTFDEWDTLL
Sbjct:  321 MFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMGGSGS----RGGESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDGNGNLLQPDVTRPEEEVNPGLPAGGEGSSTGSGATKTKRGSAAARPGLMRTTFDEWDTLL 575          
BLAST of mRNA_Ecto-sp13_S_contig7122.18222.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.530e-16
Identity = 76/260 (29.23%), Postives = 111/260 (42.69%), Query Frame = 0
Query:    1 MFDHLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEHGDRE-----LEKAARDMANETVSASDAVEGGVGGELAKLEPLVHLGNIFYRGEKFFWRTKDLIEVVIQLNEAKGFLAIPASAAAEAEILNDLKA--------------KRLAAKTEHAMGGSGSGSGSRGGEIDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDG---DGNLLQPDVTRPEEEVNPGLPAGGEGSSTGSGAKKTKR 238
              +  D +G G+I+L+EF R+CL+I +M WKAER RR   G  +G HG R      +++AA  MA E   A          +L   +P   LG + Y G K FWRT + + + +  N+ K  +AI      E+E    LK               +R+A  TE   G           EI    E A  +      L +KA  + ++DY++ R+ + DG   DGN      +         L  GG G  T   +  T R
Sbjct:  133 FLETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQA----------QLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKG-----------EIQRLPEDARAK------LFDKARASVLSDYLLARLKLIDGRDADGNATDTQASAAAISAAARLGLGGVGPGTAPESASTAR 365          
BLAST of mRNA_Ecto-sp13_S_contig7122.18222.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 9.940e-11
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0
Query:    6 DANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEHGDRELEKAARDMANETVSASDAVEGGVGGELAKLEPLVHLGNIFYRGEKFFWRTKDLIEVVIQLNEAKGFLAI 120
            D +G+G+++L EF  FCL IPS+ W+AE+ARR  L N   +    EL  AAR +A    S                   V +G + ++G +FFWR+K+ I+V + LN  +G + I
Sbjct:  175 DTDGNGTVELDEFMTFCLSIPSLPWRAEKARR--LNNAESKD---ELNVAARKIARRRSSLR----------------AVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTI 268          
BLAST of mRNA_Ecto-sp13_S_contig7122.18222.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 8.760e-8
Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 0
Query:    1 MFDHLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEHGDRELEKAARDMANETVSASDAVEGGVGGELAKLEPLVHLGNIFYRGEKFFWRTKDLIEVVIQLNEAKGFLAI 120
            +  H DAN +G I+L+EF  FC+ IPS+ WKAERARR      +   G   L +AAR+      S   AV+               LG   +  + FFWR++  ++VV+  N  +G + I
Sbjct:   90 LMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARR-----MSAVDGPEALTEAARNSERRR-STCKAVD---------------LGEKIHDRKMFFWRSQQNLDVVLHENIGEGVVII 188          
BLAST of mRNA_Ecto-sp13_S_contig7122.18222.1 vs. uniprot
Match: A0A7S2BJX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJX7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.080e-5
Identity = 35/120 (29.17%), Postives = 52/120 (43.33%), Query Frame = 0
Query:    1 MFDHLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEHGDRELEKAARDMANETVSASDAVEGGVGGELAKLEPLVHLGN-----------IFYRGEKFFWRTKDLIEVVI 109
            +F  LD +G G+ID+ EF   C  IP + WKAE+ R             + +E AA+    E  +      G  G  +  LE   H  +           + Y G K FWRT + I++V+
Sbjct:   82 IFQDLDDDGGGTIDVDEFKAHCYNIPRLAWKAEKIR-------FEREKTKSIEDAAKMAEREATNLPLTPSGSTGAIMHALEDHRHQKDSAAAANMQSKEVIYEGTKLFWRTHEKIDIVM 194          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7122.18222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G5R3_ECTSI8.220e-16194.59EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LCP2_ECTSI3.530e-1629.23EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSJ9_ECTSI9.940e-1135.65EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNE5_9STRA8.760e-834.17EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2BJX7_9STRA6.080e-529.17Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 6..18
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..28
score: 11.919
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7122contigEcto-sp13_S_contig7122:600..4281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7122.18222.1mRNA_Ecto-sp13_S_contig7122.18222.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7122 600..4293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7122.18222.1 ID=prot_Ecto-sp13_S_contig7122.18222.1|Name=mRNA_Ecto-sp13_S_contig7122.18222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp
MFDHLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEHGDR
ELEKAARDMANETVSASDAVEGGVGGELAKLEPLVHLGNIFYRGEKFFWR
TKDLIEVVIQLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMGGS
GSGSGSRGGEIDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDG
DGNLLQPDVTRPEEEVNPGLPAGGEGSSTGSGAKKTKRGSAAARPGLMRT
TFDEWDTLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair