prot_Ecto-sp13_S_contig712.18219.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig712.18219.1
Unique Nameprot_Ecto-sp13_S_contig712.18219.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
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BLAST of mRNA_Ecto-sp13_S_contig712.18219.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.030e-29
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:   82 WYLMAGTWLSRWHAYVLSGTGEDLDFPTPSPGPITNGDIVDENLVPIPGKVAGKHYR 138
            WYLMAGTWLSRWHAYVLSGTGEDLDFPTPSPGPITNGDIVDENLVPIPG VAGKHYR
Sbjct: 1176 WYLMAGTWLSRWHAYVLSGTGEDLDFPTPSPGPITNGDIVDENLVPIPGMVAGKHYR 1232
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig712.18219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JK59_9PHAE1.030e-2998.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainSMARTSM00695duspcoord: 75..161
e-value: 5.9E-8
score: 42.4
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainPFAMPF06337DUSPcoord: 80..161
e-value: 3.2E-9
score: 37.3
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainPROSITEPS51283DUSPcoord: 56..163
score: 12.76
NoneNo IPR availableGENE3D3.30.2230.10coord: 47..161
e-value: 3.1E-13
score: 51.5
IPR035927DUSP-like superfamilySUPERFAMILY143791DUSP-likecoord: 65..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig712contigEcto-sp13_S_contig712:10530..11593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig712.18219.1mRNA_Ecto-sp13_S_contig712.18219.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig712 8311..11811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig712.18219.1 ID=prot_Ecto-sp13_S_contig712.18219.1|Name=mRNA_Ecto-sp13_S_contig712.18219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
MLRPRPPPLPPMAAAEVKTGREGLVQGAPAFPVREMGTAEAAHWTISNSS
SSRPNKGRRTRKRTTRPTKREEEEEEEEEEIWYLMAGTWLSRWHAYVLSG
TGEDLDFPTPSPGPITNGDIVDENLVPIPGKVAGKHYRGAMIEVWRYLHD
RYGGGPVICRSDPDGLYETKTSKHGDSSPPLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006615Pept_C19_DUSP
IPR035927DUSP-like_sf