prot_Ecto-sp13_S_contig71138.18212.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig71138.18212.1
Unique Nameprot_Ecto-sp13_S_contig71138.18212.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig71138.18212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00313CABNDNGRPTcoord: 8..19
score: 47.97
coord: 20..28
score: 59.08
coord: 29..37
score: 62.06
coord: 38..47
score: 54.15
NoneNo IPR availablePANTHERPTHR38340FAMILY NOT NAMEDcoord: 2..115
IPR001343RTX calcium-binding nonapeptide repeatPFAMPF00353HemolysinCabindcoord: 14..44
e-value: 1.5E-9
score: 37.6
IPR011049Serralysin-like metalloprotease, C-terminalGENE3D2.150.10.10coord: 1..117
e-value: 1.9E-24
score: 88.2
IPR011049Serralysin-like metalloprotease, C-terminalSUPERFAMILY51120beta-Rollcoord: 2..114
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 25..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig71138contigEcto-sp13_S_contig71138:172..546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig71138.18212.1mRNA_Ecto-sp13_S_contig71138.18212.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig71138 172..546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig71138.18212.1 ID=prot_Ecto-sp13_S_contig71138.18212.1|Name=mRNA_Ecto-sp13_S_contig71138.18212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MGGAGADTLFGGAGNDIVAGGAGNDLIYGGAGDDALSGGEGDDTFAFITG
FGTDTIADFGSTEGDTDTLDFSEIEGLVLADLLVAATFDGGNTTLPIGTH
GTIVLEGIDQTDLQAIFENGQIVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001343Hemolysn_Ca-bd
IPR011049Serralysin-like_metalloprot_C
IPR018511Hemolysin-typ_Ca-bd_CS