prot_Ecto-sp13_S_contig7111.18207.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7111.18207.1
Unique Nameprot_Ecto-sp13_S_contig7111.18207.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length308
Homology
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A6H5KX10_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE)

HSP 1 Score: 509 bits (1310), Expect = 2.680e-172
Identity = 274/309 (88.67%), Postives = 281/309 (90.94%), Query Frame = 0
Query:    1 MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPGSGGSSSAKEYASGGNGRAATSMCEMVRRTFSRAAGGGGESLDGPPSSDRLREFGGLAGGRGQEAVNGYSDLEFHVPGQRYAAATAPGG--GGSLIHAPARRPAVARGRSATRGDTGIGGGRSRGAAAAXXXXXXXXXXSSTKMR 307
            MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGP+AVVLFAKDFYVSVGALF+SYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKH+RRNSCLLSLRAAGILEEETGPG GGSSSAKE ASGGNGRAATSMCEMVRRTFSRAAGGGG+SLDGPPSSDR  EFGGLAGGRGQEA+NGYSDLEFHVPGQRYAA        GG   +AP RRP V RGRSATRGDTGIGGG+SRGAA  XX        SSTKMR
Sbjct:  580 MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFLSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHRRRNSCLLSLRAAGILEEETGPGCGGSSSAKECASGGNGRAATSMCEMVRRTFSRAAGGGGQSLDGPPSSDRFGEFGGLAGGRGQEAINGYSDLEFHVPGQRYAAXXXXXXXXGG---YAPVRRPVVTRGRSATRGDTGIGGGKSRGAAXXXXTGVGAASVSSTKMR 885          
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: D8LLS6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 2.570e-114
Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0
Query:    1 MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPGSGGSSSAKEYASGGNGRAATSMCE 189
            MASSYGGG ISDRLRVRNEGVLGYIPALGSLAAIGP+AVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSY+TSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPG GGSSSA EYASGGNGRAATSMCE
Sbjct:  595 MASSYGGGVISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYLTSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPGCGGSSSATEYASGGNGRAATSMCE 783          
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.820e-30
Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 0
Query:    1 MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSR 140
            + SS  GGA++DR   R+ G   ++PALG+   + P  V LF  +FYVS+ AL    L+ ECWLGPGMA LQ E+P+++ G SVA+LLF N+V  N+G W I  +D G   VR P F  L +SY+ S ++FG LG+++ R
Sbjct:  343 VLSSSVGGALADRWGKRSPGGYAWVPALGAALGLMPAGVALFCGNFYVSMAALGAQNLLAECWLGPGMAILQREVPRDMVGVSVAVLLFCNTVTANVGPWIISAIDPGTDAVRDPIFCQLALSYLGSALVFGWLGVLLQR 482          
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A835Z7W4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.200e-16
Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 0
Query:   26 PALGSLAAIGPIAVVLFAKDFYVSVGALFVSY--------------------------------LVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSR 140
            PA+G+ A + P    L+  +FY ++  L +                                  L+ ECWLGPGMA LQ E+P+++ G SVA+LLF NS+  N+G W I   D G A VR   F  + +SY  + V FG LGL++ R
Sbjct:  373 PAIGAAAGLVPTFFALYLGNFYAAMAVLALEVRAARCCRRRCRAACASAGRSPRSLLLQKANHNLIAECWLGPGMAILQREVPRDMVGFSVAVLLFCNSLASNVGPWIIAAADPGTADVRHSIFLTMALSYGGAAVAFGWLGLLLQR 519          
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A7S0V8H4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V8H4_9CRYP)

HSP 1 Score: 63.5 bits (153), Expect = 1.970e-8
Identity = 34/104 (32.69%), Postives = 60/104 (57.69%), Query Frame = 0
Query:    2 ASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKM 105
            AS+  GGA+++RL VR++  +  +P  G +AA+  I + + +  F  S+    V+++V ECW+G  M  L  E+P E+ G + +++  L +V+ N     IG M
Sbjct:   74 ASTLAGGALTERLAVRDKRAVLMVPVAGCVAAVPAILLAVGSAGFTASMAFYVVTFVVAECWIGAVMCVLSQEVPPEVRGVATSLISLL-TVVGNAAPLAIGAM 176          
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A3N5IY22_9GAMM (MFS transporter n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5IY22_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 1.260e-6
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 0
Query:    1 MASSYG---GGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVI-CNIGTWFIGKMD---SGLATVRKPFFAVL 120
            +AS+ G   GGAI+DRL VR+  +  +IPA G L A     V L A + YV++  L    ++   WLGP    +Q   P  +   + A++LF+ ++I   +G + +G +    SG   V    +A+L
Sbjct:  282 VASAVGTFLGGAIADRLAVRDRRMYAWIPAAGVLLAFPFYVVGLMAPNPYVAIAILIAPSVMNSLWLGPAFGTIQNLAPMRMRAMASALVLFILNIIGLGLGPFLVGVLSDLLSGTFGVNSLRYAIL 408          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KX10_9PHAE2.680e-17288.67MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLS6_ECTSI2.570e-11497.35Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z7U8_9STRA1.820e-3046.43Major facilitator superfamily domain-containing pr... [more]
A0A835Z7W4_9STRA2.200e-1634.69Major facilitator superfamily domain-containing pr... [more]
A0A7S0V8H4_9CRYP1.970e-832.69Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A3N5IY22_9GAMM1.260e-632.28MFS transporter n=1 Tax=Xanthomonadales bacterium ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..82
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 47..66
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 2..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7111contigEcto-sp13_S_contig7111:872..2748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7111.18207.1mRNA_Ecto-sp13_S_contig7111.18207.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7111 793..2822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7111.18207.1 ID=prot_Ecto-sp13_S_contig7111.18207.1|Name=mRNA_Ecto-sp13_S_contig7111.18207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp
MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSV
GALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTW
FIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHQRRNSCLL
SLRAAGILEEETGPGSGGSSSAKEYASGGNGRAATSMCEMVRRTFSRAAG
GGGESLDGPPSSDRLREFGGLAGGRGQEAVNGYSDLEFHVPGQRYAAATA
PGGGGSLIHAPARRPAVARGRSATRGDTGIGGGRSRGAAAAGAATVGAAS
VSSTKMR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf