mRNA_Ecto-sp13_S_contig7111.18207.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A6H5KX10_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE) HSP 1 Score: 558 bits (1437), Expect = 1.470e-190 Identity = 299/335 (89.25%), Postives = 307/335 (91.64%), Query Frame = 2
Query: 2 VYYHRQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPGSGGSSSAKEYASGGNGRAATSMCEMVRRTFSRAAGGGGESLDGPPSSDRLREFGGLAGGRGQEAVNGYSDLEFHVPGQRYAAATAPGG--GGSLIHAPARRPAVARGRSATRGDTGIGGGRSRGAAAAXXXXXXXXXXSSTKMR 1000
VYYHRQYPSQVALYS+INAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGP+AVVLFAKDFYVSVGALF+SYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKH+RRNSCLLSLRAAGILEEETGPG GGSSSAKE ASGGNGRAATSMCEMVRRTFSRAAGGGG+SLDGPPSSDR EFGGLAGGRGQEA+NGYSDLEFHVPGQRYAA GG +AP RRP V RGRSATRGDTGIGGG+SRGAA XX SSTKMR
Sbjct: 554 VYYHRQYPSQVALYSIINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFLSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHRRRNSCLLSLRAAGILEEETGPGCGGSSSAKECASGGNGRAATSMCEMVRRTFSRAAGGGGQSLDGPPSSDRFGEFGGLAGGRGQEAINGYSDLEFHVPGQRYAAXXXXXXXXGG---YAPVRRPVVTRGRSATRGDTGIGGGKSRGAAXXXXTGVGAASVSSTKMR 885
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: D8LLS6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 9.490e-133 Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 2
Query: 2 VYYHRQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPGSGGSSSAKEYASGGNGRAATSMCE 646
VYYHRQYPSQVALYSVINAGFVSVGGMASSYGGG ISDRLRVRNEGVLGYIPALGSLAAIGP+AVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSY+TSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPG GGSSSA EYASGGNGRAATSMCE
Sbjct: 569 VYYHRQYPSQVALYSVINAGFVSVGGMASSYGGGVISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYLTSFVLFGVLGLMVSRKHQRRNSCLLSLRAAGILEEETGPGCGGSSSATEYASGGNGRAATSMCE 783
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.920e-39 Identity = 78/165 (47.27%), Postives = 108/165 (65.45%), Query Frame = 2
Query: 5 YYHRQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSR 499
Y+HR YP+ + YSVIN V+ GG+ SS GGA++DR R+ G ++PALG+ + P V LF +FYVS+ AL L+ ECWLGPGMA LQ E+P+++ G SVA+LLF N+V N+G W I +D G VR P F L +SY+ S ++FG LG+++ R
Sbjct: 318 YFHRAYPAYESQYSVINGVIVAAGGVLSSSVGGALADRWGKRSPGGYAWVPALGAALGLMPAGVALFCGNFYVSMAALGAQNLLAECWLGPGMAILQREVPRDMVGVSVAVLLFCNTVTANVGPWIISAIDPGTDAVRDPIFCQLALSYLGSALVFGWLGVLLQR 482
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A835Z7W4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.930e-20 Identity = 64/201 (31.84%), Postives = 92/201 (45.77%), Query Frame = 2
Query: 5 YYHRQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYI----PALGSLAAIGPIAVVLFAKDFYVSVGALFVSY--------------------------------LVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSR 499
Y+ R +P++ YS IN V+ GG+ASS+ PA+G+ A + P L+ +FY ++ L + L+ ECWLGPGMA LQ E+P+++ G SVA+LLF NS+ N+G W I D G A VR F + +SY + V FG LGL++ R
Sbjct: 319 YFLRAFPAREGAYSAINGAIVAAGGVASSFAXXXXXXXXXXXXXXXXXXXXXXXPAIGAAAGLVPTFFALYLGNFYAAMAVLALEVRAARCCRRRCRAACASAGRSPRSLLLQKANHNLIAECWLGPGMAILQREVPRDMVGFSVAVLLFCNSLASNVGPWIIAAADPGTADVRHSIFLTMALSYGGAAVAFGWLGLLLQR 519
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A7S0V8H4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V8H4_9CRYP) HSP 1 Score: 82.0 bits (201), Expect = 7.900e-15 Identity = 44/130 (33.85%), Postives = 77/130 (59.23%), Query Frame = 2
Query: 5 YYHRQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKM 394
++ ++P+ A +SVINA + VGG AS+ GGA+++RL VR++ + +P G +AA+ I + + + F S+ V+++V ECW+G M L E+P E+ G + +++ L +V+ N IG M
Sbjct: 48 FFRAKFPAMQAQFSVINALTIGVGGCASTLAGGALTERLAVRDKRAVLMVPVAGCVAAVPAILLAVGSAGFTASMAFYVVTFVVAECWIGAVMCVLSQEVPPEVRGVATSLISLL-TVVGNAAPLAIGAM 176
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A7S4C848_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C848_9EUGL) HSP 1 Score: 76.3 bits (186), Expect = 2.480e-12 Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 2
Query: 14 RQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKE 313
++P V +S INAG +SVGG+ASS GG ++DR+ + ++PA+GSL AI A+ + F V++ LF+ YLV ECW GP +A L +P++
Sbjct: 142 EKFPEFVNSFSAINAGVISVGGLASSLLGGLLADRVFTGRRKL--WVPAIGSLLAIPTFALFVTQDSFGVALFCLFLEYLVAECWFGPTLAALYDVVPQD 239
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A7Y1W0B6_9GAMM (MFS transporter n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y1W0B6_9GAMM) HSP 1 Score: 71.6 bits (174), Expect = 4.160e-10 Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 2
Query: 14 RQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVI-CNIGTWFIGKMDSGL 406
R Y + S++ + VGG+A ++ GG+++DRL R+ G IPA LA + V + + V+V + V +G WLGP ++ +Q +P + T+ AI LF+N++I +GT+ IG + GL
Sbjct: 249 RSYEITLLHASLVYGAILLVGGIAGTWLGGSLADRLGERDRGAYARIPAFAFLATVPFYVVGVLSPTLLVTVLVMTVPTALGLAWLGPVISAIQHLVPPNMRATASAIFLFVNNLIGIGLGTFIIGAISDGL 380
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A3N5IY22_9GAMM (MFS transporter n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5IY22_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 6.130e-7 Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 2
Query: 77 GMASSYG---GGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVI-CNIGTWFIGKMD---SGLATVRKPFFAVL 439
G+AS+ G GGAI+DRL VR+ + +IPA G L A V L A + YV++ L ++ WLGP +Q P + + A++LF+ ++I +G + +G + SG V +A+L
Sbjct: 281 GVASAVGTFLGGAIADRLAVRDRRMYAWIPAAGVLLAFPFYVVGLMAPNPYVAIAILIAPSVMNSLWLGPAFGTIQNLAPMRMRAMASALVLFILNIIGLGLGPFLVGVLSDLLSGTFGVNSLRYAIL 408
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A0M0JIP1_9EUKA (Major facilitator family transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JIP1_9EUKA) HSP 1 Score: 60.5 bits (145), Expect = 2.390e-6 Identity = 51/186 (27.42%), Postives = 83/186 (44.62%), Query Frame = 2
Query: 5 YYHRQYPSQVAL-YSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPAL------------------------GSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIG-KMDSG---LATVRKPFFAVLFMSYVTSFVLFG 475
+Y ++P+++ +++I A V G S+ GGG ++D+L VR+ ++PA GSL AI L A +S+G+LF+ YL+ ECW GP + LQ P G + + L +++ N + IG + SG L + P VL+ +FV G
Sbjct: 417 FYRARFPAEIGTEFALIKASVNGVAGSISATGGGFLADKLSVRDRRASYWVPAACKCSLRRPVLQXXXXXXXXXXXXAGSLLAIPFWLGALDAPTLELSLGSLFIEYLLAECWFGPTITALQAAAPAGTQGLTTGVFSCL-TLVGNFAPYAIGLAVQSGGYELPQLLAPTVGVLYTLSALAFVAAG 601
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Match: A0A2P7QLW5_9SPHN (MFS transporter n=2 Tax=Sphingomonas TaxID=13687 RepID=A0A2P7QLW5_9SPHN) HSP 1 Score: 57.8 bits (138), Expect = 1.380e-5 Identity = 38/135 (28.15%), Postives = 68/135 (50.37%), Query Frame = 2
Query: 5 YYHRQYPSQVALYSVINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVI-CNIGTWFIGKMDSGL 406
+++R + ++ V VGG+A ++ GG I DR+ + G IPA L A A+ LFA + + + + ++ WLGP ++ +Q +P + T+ A LF+N++I +G +F+G M L
Sbjct: 245 FFNRSFDLPLSAVGWFYGSIVLVGGVAGTWLGGWIGDRVGPAHPGRYALIPATCFLIAAPAFALGLFAPNLWSAWLLFALGQMLALAWLGPVISAIQHIVPANMRSTTSASFLFINNLIGIAVGNYFLGWMSDRL 379 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7111.18207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7111.18207.1 >prot_Ecto-sp13_S_contig7111.18207.1 ID=prot_Ecto-sp13_S_contig7111.18207.1|Name=mRNA_Ecto-sp13_S_contig7111.18207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp MASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPIAVVLFAKDFYVSVback to top mRNA from alignment at Ecto-sp13_S_contig7111:793..2822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7111.18207.1 ID=mRNA_Ecto-sp13_S_contig7111.18207.1|Name=mRNA_Ecto-sp13_S_contig7111.18207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2030bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7111:793..2822+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7111:793..2822+ >mRNA_Ecto-sp13_S_contig7111.18207.1 ID=mRNA_Ecto-sp13_S_contig7111.18207.1|Name=mRNA_Ecto-sp13_S_contig7111.18207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7111:793..2822+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |