prot_Ecto-sp13_S_contig12155.1820.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12155.1820.1
Unique Nameprot_Ecto-sp13_S_contig12155.1820.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length286
Homology
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 484 bits (1245), Expect = 2.280e-159
Identity = 252/286 (88.11%), Postives = 259/286 (90.56%), Query Frame = 0
Query:    2 PLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATLDGETLGLLVRETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPALVPGWNHVGDWVDTVSTALAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTCGIEGVAGYGYNLSADEGTDDTAETAEDGYDDDASATAEERATVGSGSGGDGSV--DPEDTWWVAAAXXXXXXLGILLCGGLLMSKFGKKNAVAGGRAGALAKGSGGAADETKAEPM 285
            PLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATL GETLGLLVRETIGDE+YSGPENFVVNMTVDEIQEW+LEGSEQHPFHMHVNH+QFA VDGP+LVPGWNHVGDWVDTVST +AVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTCGIEGVAGYGYNLSAD    DTAET EDGYDDDASATAEERATVG           DPEDTWWVA  XXXXXX  ILLCGGLLMSKFGK++AVAG RA A AK SGGAADETKAEPM
Sbjct:  937 PLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATLGGETLGLLVRETIGDEFYSGPENFVVNMTVDEIQEWMLEGSEQHPFHMHVNHMQFAIVDGPSLVPGWNHVGDWVDTVSTTVAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTCGIEGVAGYGYNLSAD----DTAETDEDGYDDDASATAEERATVGXXXXXXXXXXXDPEDTWWVAXXXXXXXXXXILLCGGLLMSKFGKRDAVAGARAAAPAKDSGGAADETKAEPM 1218          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.800e-31
Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 0
Query:    1 MPLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATLD--GETLGLLVRETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPAL----VPGWNHVGDWVDTVSTALAVVRF-RTERYGGHVAMHCHVNSHSDTGVMAVADIDG----GEGPNEDPIALAAGTC 171
            +PL  + V        DDL  W PCRP YL   ++A  +   +TL L VRE +G + +S  +N+V  + +   Q+W ++GS+ HPFH+HVNH+Q     GPA     VPGW   GD++DT+S    +  F R ER+ G + MHCH+  HSD GV+ +A+I G    GE P   P  +  GTC
Sbjct:  584 VPLVTITVVPSLRDAADDLPAWGPCRPAYLPADISALPEVVPKTLALEVREGVGGQVFSSVDNYVTEIGLGFAQQWTIQGSDLHPFHIHVNHMQLGPTIGPANNWPDVPGWFQPGDYIDTISALGNLPVFMRPERFVGPMVMHCHIAQHSDNGVIGIANILGNGADGEAP---PTVVDFGTC 762          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.280e-30
Identity = 68/175 (38.86%), Postives = 93/175 (53.14%), Query Frame = 0
Query:    3 LAALYVEGGSSSPDDDLDTWTPCRPYYLQDL--VNATLDGETLGLLVRETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPALVPG---WNHVGDWVDTVSTALAV-VRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTC 171
            +A + V      P D L  W PCRP YL D   V   L G    L VR+ +  + ++ P+ ++  M+   ++ W + GS++HP H+HV+H+Q  +V      PG   WN  GDWVD++S   AV V  R ERYGGH  MHCH+  HSD G+MAV  +  G      P     GTC
Sbjct:  716 IATITVTPFLRPPADPLPLWAPCRPGYLTDARKVPRRLRGPPFDLTVRDALNGQKFTSPDTYIRTMSNRNLEAWQITGSDKHPLHIHVDHMQLGAVGVTNQWPGAPNWNMPGDWVDSISAPGAVPVYMRPERYGGHRVMHCHIAEHSDMGIMAVMYVRYGSTAKPFPYVKNWGTC 890          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A835ZAX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.050e-27
Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 0
Query:   19 LDTWTPCRPYYLQDLVNATLD---GETLGLLVRETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPAL---VPGWNHVGDWVDTVSTALAV-VRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDG-GEGPNEDPIALAAGTC 171
            L  W PCRP YL DL N   D   G+   L VR  +  + ++GPE+++  MTV++ Q+WL+ G++QHP H+HVNH+Q   +         PGW+  GD++DT+S    V VR   ER+ G + +HCHV SH+D GV+ V DI G G+     P     G+C
Sbjct:  584 LPVWEPCRPAYLMDL-NDMPDKKLGDAFALEVRTQLNGQLFTGPEDYLATMTVNKPQQWLVIGTDQHPLHIHVNHMQLGDITKANQWDEAPGWHVTGDFIDTLSAKAQVPVRVNPERFIGPMFLHCHVPSHADLGVLGVIDIRGKGDDGEASPEIEDYGSC 743          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A835YZ52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ52_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.660e-19
Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   27 PYYLQDLVNATLDGETLGL-LVRETIGDEYYSGPENF-VVNMTVDEIQEWLLEGSEQHPFHMHVNHVQF-ASVDGPALVPGWNHVGDWVDTVSTALAV-VRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPN 160
            PYYL DL        T+ +      I  + ++G     +  +    +  W + G+++HPFH+HVN +Q  A+V  P    GW   GDW+DT+S+   V VRFRT+R+GG++  HCH+  HSD+G+M  A I GG+  N
Sbjct:  971 PYYLSDLRGLPAPPRTVAVSFANGAINGQLWAGARTPPLATVAEGALNAWSVTGTDEHPFHLHVNPMQLQAAVARPGAPAGWFRAGDWLDTLSSPNTVNVRFRTDRFGGNMIFHCHIYEHSDSGMMGHAVITGGQQAN 1108          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.800e-19
Identity = 57/180 (31.67%), Postives = 92/180 (51.11%), Query Frame = 0
Query:    3 LAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATLDGETLGLLVR------ETIGDEYYSGPENF--VVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGP--ALVPGWNHVGDWVDTVST-ALAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTC 171
            +A + V   + +P   L    PCRP YL D+V  T   E + L +R        +    Y+G  +   +  MT+ +  +W+++GS  HPFH HVNH+  +    P   +   W+  GDW+D++S    A V  R + + G + MHCH+ +H+D G+M  + I+G     +D +A   GTC
Sbjct:  635 IATITVGAAAGAPAPALPKLKPCRPGYLMDIV-PTAATEQVDLTIRVDGFSVNNLPGALYTGVADAAPMTTMTLGQPYQWVIDGSANHPFHAHVNHMMLSVDIQPWDQVQANWHMPGDWLDSISVQGQAPVLIRPDHFSGPMVMHCHIAAHADMGLMGFSTIEG-----KDVVAEDWGTC 808          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A7S4AR43_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AR43_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.420e-15
Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 0
Query:    3 LAALYVEGGSSSP-DDDLDTWTPCRPYYLQDLVNATLDGET-LGLLV-RETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPALVPGWNHVGDWVDTVSTALAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDG 155
            +A + ++  SSS    +L  W P RP  +Q + + T+  E  L + + R++I  + +  P   + ++  +E+ EW L  + QHPFH+H+ H+Q  + +G     G+   G++ DT+S     VRFRT  +G  + +HCHV  HSD G M   D+ G
Sbjct:  582 VAIVNIKSDSSSTLRRELGRWKPKRPLSIQSMESITVQDENRLAIKIKRDSINGKEWD-PSTPLKSLAFNEVHEWELPDTRQHPFHIHLYHMQVVTPNGCG--DGYRE-GEFYDTISARPCTVRFRTSNFGQRLVVHCHVMLHSDLGSMGWFDVRG 733          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A7Y2GKD5_9ACTN (Multicopper oxidase domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKD5_9ACTN)

HSP 1 Score: 86.3 bits (212), Expect = 2.990e-15
Identity = 52/154 (33.77%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   17 DDLDTWTPCRPYYLQDLVN-ATLDGETLGLLVRETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPALVPGWNHVGDWVDTVSTALAVVRFRTER-----YGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPI 164
            D + +W+  RP YL+DL + AT++ E++ +  R    D++   P+     ++ D +QEW L G+  HPFH+HV H+Q     G          G++ DTV+     VRF  +      Y G   MHCH+  H D G M   D+ GG  P   PI
Sbjct:  350 DGVSSWSANRPSYLRDLSSVATVNTESVSIGARTINNDKF--DPDTPTFTLSADMVQEWTLSGANNHPFHLHVYHMQTFGCGGDF------EDGEYYDTVAGD-CTVRFDLDAVTGSAYAGRTIMHCHILDHEDRGAMGWVDVIGGTPPPVLPI 494          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A835ZB31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB31_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.530e-15
Identity = 53/140 (37.86%), Postives = 68/140 (48.57%), Query Frame = 0
Query:   19 LDTWTPCRPYYLQDL-VNATLDGETLGLLVRETIGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPALVPGWNHVGDWVDTVSTA-LAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGG 156
            L  W PCRP YL+DL  +A     T  + +  +I    Y+        M +    EW  E + QHP HMHVNHVQ  +         W+  GDWVDT++ + +   RFR ER         HV  HSD G+MAV  I GG
Sbjct: 1156 LPMWRPCRPAYLRDLRADAVAKDHTFMITLEGSINRTPYAQGAVMTTAM-LGATYEWTAEMTNQHPLHMHVNHVQLLAPPNFKEARDWHRDGDWVDTITGSDMVKFRFRPER---------HVFGHSDLGMMAVVQIQGG 1285          
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Match: A0A836CF80_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF80_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.600e-14
Identity = 62/219 (28.31%), Postives = 89/219 (40.64%), Query Frame = 0
Query:    3 LAALYVEGGSSSPDDDLDTWTPCRPYYLQDL--------VNATLDGETLGLLVRETIGDEYYSGPENFVVNM--------------------------TVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGP-ALVPGW--------------NHVGDWVDTVSTALAVV-RFRTERYGGHVAMHCHVNSHSDTGVMAVADIDG-GEGPNEDPIALAAGT 170
            +  ++V+      + DL  W PCRP+YL DL         +  L G+  G L+       +        V                             +D + E+++   ++HP H+HVNHVQ        A VPGW                 GDW DTVS  + V  RF T+R+   + +HCHV +HSD GV A+  I G G   +  P  L +GT
Sbjct:  100 IGTIHVKPSDQPREPDLLAWVPCRPHYLADLQHDLPAQSADVELRGDVNGALLTTDYAPLFNFERSAAAVXXXXXXXXXXQAVLKVLRVLATGVRSAAALDSVNEFVMVNLQEHPAHLHVNHVQLQGAPTSFADVPGWLXXXXXXXXXXXXXXQPGDWYDTVSHPVPVTTRFVTDRFSRAMMLHCHVYAHSDNGVAAMMAIAGKGADADASPRFLQSGT 318          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12155.1820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE2.280e-15988.11PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZH56_9STRA3.800e-3140.11CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835ZCB5_9STRA8.280e-3038.86CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835ZAX7_9STRA1.050e-2740.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ52_9STRA1.660e-1937.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUJ5_9STRA6.800e-1931.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4AR43_9STRA1.420e-1532.69Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7Y2GKD5_9ACTN2.990e-1533.77Multicopper oxidase domain-containing protein n=1 ... [more]
A0A835ZB31_9STRA3.530e-1537.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF80_9STRA3.600e-1428.31Plastocyanin-like domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008972CupredoxinGENE3D2.60.40.420coord: 45..157
e-value: 8.4E-17
score: 62.9
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 31..159
IPR011706Multicopper oxidase, type 2PFAMPF07731Cu-oxidase_2coord: 59..151
e-value: 1.3E-9
score: 37.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..251
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 252..285
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..229
NoneNo IPR availableTMHMMTMhelixcoord: 229..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12155contigEcto-sp13_S_contig12155:365..3181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12155.1820.1mRNA_Ecto-sp13_S_contig12155.1820.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12155 284..5161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12155.1820.1 ID=prot_Ecto-sp13_S_contig12155.1820.1|Name=mRNA_Ecto-sp13_S_contig12155.1820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=286bp
MPLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATLDGETLGLLVRET
IGDEYYSGPENFVVNMTVDEIQEWLLEGSEQHPFHMHVNHVQFASVDGPA
LVPGWNHVGDWVDTVSTALAVVRFRTERYGGHVAMHCHVNSHSDTGVMAV
ADIDGGEGPNEDPIALAAGTCGIEGVAGYGYNLSADEGTDDTAETAEDGY
DDDASATAEERATVGSGSGGDGSVDPEDTWWVAAAAGAGVGLGILLCGGL
LMSKFGKKNAVAGGRAGALAKGSGGAADETKAEPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin
IPR011706Cu-oxidase_2